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| PID | QueryLength | FocusSite | TITLE |
| 19598 | 4382 | 3468 N | RecName: Full=Replicase polyprotein 1a; Short=pp1a;AltName: Full=ORF1a polyprotein;Contains: RecName: Full=Host translation inhibitor nsp1; AltName: Full=Leader protein; AltName: Full=Non-structural protein 1; Short=nsp1;Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog;Contains: RecName: Full=Papain-like protease nsp3; Short=PL-PRO; EC=3.4.19.12 ; EC=3.4.22.- ; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO;Contains: RecName: Full=Non-structural protein 4; Short=nsp4;Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; EC=3.4.22.69 ; AltName: Full=Main protease; Short=Mpro; AltName: Full=Non-structural protein 5; Short=nsp5; AltName: Full=SARS coronavirus main proteinase;Contains: RecName: Full=Non-structural protein 6; Short=nsp6;Contains: RecName: Full=Non-structural protein 7; Short=nsp7;Contains: RecName: Full=Non-structural protein 8; Short=nsp8;Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; EC=2.7.7.50;Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL;Contains: RecName: Full=Non-structural protein 11; Short=nsp11; |
| AC/ID | AC:P0C6U8 ID:R1A_SARS |
| Feature Table for 3468-th site |
HELIX: CHAIN: /note="3C-like proteinase nsp5" /id="PRO_0000338259" DOMAIN: /note="Peptidase C30" TOPO_DOM: /note="Cytoplasmic" CHAIN: /note="Replicase polyprotein 1a" /id="PRO_0000338254" |
Percentages of Amino Acids in Homologous Proteins
 [show alignment]
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E:42% D:24% N:15% A:13% V:6% |
| Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
 5b6o |
H (alpha-helix) | e (exposed) | 75.8 |
| Predicted Bind Molecules |
| homo:4 compound:2 metal:4 precipitant:8 |
| Templates for 3D complexes |
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homo [69082:R1A_CVHSA
] 3iwm_C_1_C_2 3iwm_C_2_C_1 7ta7_A_1_B_2 7ta7_B_2_A_1
compound [K1G ] 5rgr_A_1_E_1 5rgr_A_2_E_2
metal [CA ] 7lcp_A_1_D_1 7lcp_A_2_D_2 [NA ] 7nf5_A_1_L_1 7nf5_A_2_L_2
precipitant [GOL ] 6xbi_A_1_E_1 [EDO ] 6xkh_A_1_C_1 6xkh_A_2_C_2 7tgr_A_1_D_1 7tgr_A_2_D_2 [DMS ] 7b5z_A_1_H_1 7b5z_A_2_H_2 [SO4 ] 7mat_B_1_D_1
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Summary for the 3468-th Site(N)