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| PID | QueryLength | FocusSite | TITLE |
| 19598 | 4382 | 3348 P | RecName: Full=Replicase polyprotein 1a; Short=pp1a;AltName: Full=ORF1a polyprotein;Contains: RecName: Full=Host translation inhibitor nsp1; AltName: Full=Leader protein; AltName: Full=Non-structural protein 1; Short=nsp1;Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog;Contains: RecName: Full=Papain-like protease nsp3; Short=PL-PRO; EC=3.4.19.12 ; EC=3.4.22.- ; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO;Contains: RecName: Full=Non-structural protein 4; Short=nsp4;Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; EC=3.4.22.69 ; AltName: Full=Main protease; Short=Mpro; AltName: Full=Non-structural protein 5; Short=nsp5; AltName: Full=SARS coronavirus main proteinase;Contains: RecName: Full=Non-structural protein 6; Short=nsp6;Contains: RecName: Full=Non-structural protein 7; Short=nsp7;Contains: RecName: Full=Non-structural protein 8; Short=nsp8;Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; EC=2.7.7.50;Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL;Contains: RecName: Full=Non-structural protein 11; Short=nsp11; |
| AC/ID | AC:P0C6U8 ID:R1A_SARS |
| Feature Table for 3348-th site |
CHAIN: /note="3C-like proteinase nsp5" /id="PRO_0000338259" DOMAIN: /note="Peptidase C30" TOPO_DOM: /note="Cytoplasmic" CHAIN: /note="Replicase polyprotein 1a" /id="PRO_0000338254" |
Percentages of Amino Acids in Homologous Proteins
 [show alignment]
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P:68% C:13% T:7% A:6% S:6% |
| Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
 5b6o |
T (Hbond turn) | e (exposed) | 41.9 |
| Predicted Bind Molecules |
| homo:2 compound:6 precipitant:19 |
| Templates for 3D complexes |
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homo [69082:R1AB_SARS2
] 7ta7_A_1_B_2 7ta7_B_2_A_1
compound [LWA ] 5reg_A_1_E_1 5reg_A_2_E_2 [LZE ] 7aga_A_1_B_1 7aga_A_2_B_2 [QGO ] 7gij_A_1_G_1 [GT7 ] 7gs1_A_1_E_1
precipitant [MPD ] 1q2w_A_1_C_1 [MRD ] 3snd_A_1_E_1 [EDO ] 3vb4_B_1_H_1 7lcq_A_1_B_1 7lcq_A_2_B_2 8ute_A_1_G_1 8ute_A_2_G_2 [GOL ] 3vb4_B_1_K_1 7lmh_A_1_D_1 7lmh_A_2_D_2 7lmi_A_1_D_1 7lmi_A_2_D_2 7lmj_A_1_D_1 7lmj_A_2_D_2 7t70_A_1_O_1 7ta7_A_1_E_1 7ta7_B_2_F_2 [DMS ] 7ghm_A_1_H_1 7gs1_A_1_H_1
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Summary for the 3348-th Site(P)