|
|
| PID | QueryLength | FocusSite | TITLE |
| 19598 | 4382 | 3252 K | RecName: Full=Replicase polyprotein 1a; Short=pp1a;AltName: Full=ORF1a polyprotein;Contains: RecName: Full=Host translation inhibitor nsp1; AltName: Full=Leader protein; AltName: Full=Non-structural protein 1; Short=nsp1;Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog;Contains: RecName: Full=Papain-like protease nsp3; Short=PL-PRO; EC=3.4.19.12 ; EC=3.4.22.- ; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO;Contains: RecName: Full=Non-structural protein 4; Short=nsp4;Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; EC=3.4.22.69 ; AltName: Full=Main protease; Short=Mpro; AltName: Full=Non-structural protein 5; Short=nsp5; AltName: Full=SARS coronavirus main proteinase;Contains: RecName: Full=Non-structural protein 6; Short=nsp6;Contains: RecName: Full=Non-structural protein 7; Short=nsp7;Contains: RecName: Full=Non-structural protein 8; Short=nsp8;Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; EC=2.7.7.50;Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL;Contains: RecName: Full=Non-structural protein 11; Short=nsp11; |
| AC/ID | AC:P0C6U8 ID:R1A_SARS |
| Feature Table for 3252-th site |
HELIX: CHAIN: /note="3C-like proteinase nsp5" /id="PRO_0000338259" DOMAIN: /note="Peptidase C30" TOPO_DOM: /note="Cytoplasmic" CHAIN: /note="Replicase polyprotein 1a" /id="PRO_0000338254" |
Percentages of Amino Acids in Homologous Proteins
 [show alignment]
|
K:34% V:17% A:13% L:13% D:6% C:6% I:6% F:6% |
| Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
 5b6o |
H (alpha-helix) | e (exposed) | 44.8 |
| Predicted Bind Molecules |
| homo:13 compound:4 metal:2 precipitant:17 |
| Templates for 3D complexes |
|
homo [69082:R1AB_SARS2
] 7jun_A_1_A_2 7jun_A_2_A_1 7lb7_A_1_A_2 7lb7_A_2_A_1 7lco_A_1_A_2 7lco_A_2_A_1 7ltn_A_1_A_2 7ltn_A_2_A_1 7r7h_B_1_A_1 8dkl_A_1_B_1 8dkl_B_1_A_1 8h5f_A_1_A_2 8h5f_A_2_A_1
compound [S7D ] 5rf9_A_1_E_1 5rf9_A_2_E_2 [U0S ] 5rgj_A_1_E_1 5rgj_A_2_E_2
metal [CL ] 6yvf_A_1_D_2 6yvf_A_2_D_1
precipitant [EDO ] 3vb4_A_1_J_1 7bb2_A_1_F_1 7bfb_B_1_N_1 7t8r_A_1_F_1 7t8r_A_2_F_2 [DMS ] 7ghq_B_1_P_1 7gko_B_1_P_1 7gkr_B_1_P_1 7gln_A_1_J_1 7gnp_B_1_W_1 7mhm_A_1_C_1 7mhm_A_2_C_2 7t70_A_1_J_1 7t70_A_1_W_1 8vsg_A_1_I_1 [GOL ] 8dzc_A_1_C_1 8dzc_A_2_C_2
|
 [Back to SiteTable] |
 [Back to Search Page] |
 [Back to Top Page] |
Summary for the 3252-nd Site(K)