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| PID | QueryLength | FocusSite | TITLE |
| 31440 | 4405 | 3343 H | RecName: Full=Replicase polyprotein 1a; Short=pp1a;AltName: Full=ORF1a polyprotein;Contains: RecName: Full=Host translation inhibitor nsp1; AltName: Full=Leader protein; AltName: Full=Non-structural protein 1; Short=nsp1;Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog;Contains: RecName: Full=Papain-like protease nsp3 ; EC=3.4.19.12 ; EC=3.4.22.-; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO; AltName: Full=Papain-like proteinase; Short=PL-PRO;Contains: RecName: Full=Non-structural protein 4; Short=nsp4;Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; EC=3.4.22.69; AltName: Full=Main protease; Short=Mpro ; AltName: Full=Non-structural protein 5; Short=nsp5; AltName: Full=SARS coronavirus main proteinase;Contains: RecName: Full=Non-structural protein 6; Short=nsp6;Contains: RecName: Full=Non-structural protein 7; Short=nsp7;Contains: RecName: Full=Non-structural protein 8; Short=nsp8;Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; EC=2.7.7.50 ;Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL;Contains: RecName: Full=Non-structural protein 11; Short=nsp11; |
| AC/ID | AC:P0DTC1 ID:R1A_SARS2 |
| Feature Table for 3343-th site |
STRAND: CHAIN: /note="3C-like proteinase nsp5" /id="PRO_0000449639" DOMAIN: /note="Peptidase C30" TOPO_DOM: /note="Cytoplasmic" CHAIN: /note="Replicase polyprotein 1a" /id="PRO_0000449634" |
Percentages of Amino Acids in Homologous Proteins
 [show alignment]
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H:34% A:28% Y:19% R:13% V:6% |
| Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
 6xbi |
E (beta-strand) | e (exposed) | 32.5 |
| Predicted Bind Molecules |
| compound:16 metal:1 precipitant:18 |
| Templates for 3D complexes |
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compound [T0J ] 5re5_A_1_E_1 5re5_A_2_E_2 [O0S ] 5re6_A_1_E_1 5re6_A_2_E_2 [K3S ] 5rfb_A_1_E_1 5rfb_A_2_E_2 [K1Y ] 5rfc_A_1_E_1 5rfc_A_2_E_2 [NZD ] 5rgg_A_1_E_1 5rgg_A_2_E_2 [UHG ] 5rh4_A_1_B_1 5rh4_A_2_B_2 [A82 ] 6yvf_A_1_B_1 6yvf_A_2_B_2 [N00 ] 7gdt_A_1_G_1 7gdt_A_2_G_2
metal [NI ] 7xar_A_1_C_1
precipitant [EDO ] 7e18_A_1_C_1 7e18_A_2_C_2 8ute_A_1_L_1 8ute_A_2_L_2 [DMS ] 7grh_B_1_V_1 7grs_B_1_DA_1 [PEG ] 7kvr_A_1_G_1 7lfp_B_1_K_1 7tob_A_1_C_1 7tob_A_2_C_2 8uh5_A_1_C_1 8uh5_A_2_C_2 8uh9_A_1_C_1 8uh9_A_2_C_2 [FMT ] 7ntw_A_1_J_1 7ntw_A_2_J_2 [MLI ] 7z2k_A_1_C_1 [1PE ] 8drv_B_1_E_1
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Summary for the 3343-rd Site(H)