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| PID | QueryLength | FocusSite | TITLE |
| 2624989 | 215 | 8 K | RecName: Full=High mobility group protein B1;AltName: Full=High mobility group protein 1; Short=HMG-1; |
| AC/ID | AC:P09429 ID:HMGB1_HUMAN |
| Feature Table for 8-th site |
MOD_RES: /note="N6-acetyllysine" STRAND: BINDING: /ligand="heparin" /ligand_id="ChEBI:CHEBI:28304" REGION: /note="LPS binding (delipidated)" REGION: /note="Sufficient for interaction with HAVCR2" CHAIN: /note="High mobility group protein B1" /id="PRO_0000048526" |
Percentages of Amino Acids in Homologous Proteins
 [show alignment]
|
K:47% A:27% R:9% G:5% P:4% Y:4% E:2% T:2% |
| Template For Monomer | predicted SecStr | predicted ExpBur | Predicted Relative Acc(%) |
 2yrq |
S (bend) | e (exposed) | 47.2 |
| Predicted Bind Molecules |
| hetero:1 homo:2 nucleotide:25 precipitant:1 |
| Templates for 3D complexes |
|
hetero [14888:P53_HUMAN
] 2ly4_A_1_B_1
homo [18404:HMGB1_RAT
] 4qr9_A_1_B_1 4qr9_B_1_A_1
nucleotide [gccggtcccgataaccaacttaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 4nnu_A_1_F_1 4nnu_B_1_E_1 [atatcgatatxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 4qr9_A_1_C_1 4qr9_A_1_D_1 4qr9_A_1_F_1 4qr9_B_1_C_1 4qr9_B_1_D_1 [tttattattttatattatataaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 5jgh_A_1_E_1 5jgh_G_1_K_1 5jgh_J_1_H_1 [ttatataatataaaataataaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 5jgh_A_1_F_1 5jgh_G_1_L_1 5jgh_J_1_I_1 [aataataaattatataatataaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 5jh0_A_1_E_1 [ttatattatataatttattattxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 5jh0_A_1_F_1 [ggcctatcxxxxxgcggtatgcacttttaacagtcaccccccaactaacaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 6erp_A_1_C_1 6erp_D_1_F_1 [ggcctgtcxxxxxggtttggttggttcggggtatggggttagcagcggtgxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 6erq_A_1_C_1 6erq_D_1_F_1 [ctgtgcagacattcaattgttaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 6hb4_G_1_H_1 6hb4_J_1_K_1 [taacaaaaaatttccaccaaacxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 6hc3_J_1_K_1 [ctaagagctaatagaaaggctaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 7lbw_A_1_D_1 [ttaacagtcaccccccaactaaxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx ] 7lbx_A_1_C_1 7lbx_B_1_E_1
precipitant [EDO ] 7lbw_B_1_O_1
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Summary for the 8-th Site(K)