#WARNING:no index is registered index "YP_009725306.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725306.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.

Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
21092 139 73 YP_009725306.1()
QUERYSEQ
AGNATEVPANSTVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQ
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [YP_009725306.1()]

139
region name description
1-139 DISORDER predicted by DISOPRED

MONOMER
139
pdb_id a1 identity[%]2 description
7n0d H 100.0 R1AB_SARS2 Non-structural protein 10
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
139 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6w4h[53] A R1AB_SARS2 2'-O-methyltransferase[299 aa] B 100.0
/100.0
20
/20
R1AB_SARS2 Non-structural protein 10
6yz1[4] A R1AB_SARS2 nsp16[297 aa] B 100.0
/100.0
18
/18
R1AB_SARS2 nsp10
7diy[3] B R1AB_SARS2 nsp14-ExoN protein[286 aa] A 100.0
/100.0
43
/43
R1AB_SARS2 nsp10 protein
7egq[2] F R1AB_SARS2 Non-structural protein 9[113 aa] G 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
7egq[9] H R1AB_SARS2 Proofreading exoribonuclease[523 aa] G 100.0
/100.0
38
/38
R1AB_SARS2 Non-structural protein 10
7n0d[2] B R1AB_SARS2 Proofreading exoribonuclease[512 aa] C 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
7o7y[3] AC G1TTN1_RABIT eL39[50 aa] ZA 100.0
/100.0
4
/4
R1AB_SARS2 Replicase polyprotein 1ab
7o81[1] BC G1TTN1_RABIT eL39[50 aa] AB 100.0
/100.0
2
/2
R1AB_SARS2 Replicase polyprotein 1ab
7o7y[4] EB G1TVT6_RABIT uL22[159 aa] ZA 100.0
/100.0
8
/8
R1AB_SARS2 Replicase polyprotein 1ab
7o7y[3] RA G1SVW5_RABIT 60S ribosomal protein L4[362 aa] ZA 100.0
/100.0
7
/7
R1AB_SARS2 Replicase polyprotein 1ab
7o81[1] SA G1SVW5_RABIT 60S ribosomal protein L4[362 aa] AB 100.0
/100.0
7
/7
R1AB_SARS2 Replicase polyprotein 1ab
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
NUCLEOTIDE
139 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7n0b[1] C RNA (5'-R(*AP*UP*GP*UP*GP*AP*UP*UP*UP*UP*AP*AP*UP*.. A 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
7n0c[1] C RNA (25-MER) A 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
7n0d[4] E RNA (5'-R(*GP*GP*GP*GP*AP*UP*GP*UP*GP*AP*UP*UP*UP*.. A 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
7o7y[3] MA 28S rRNA ZA 100.0
/100.0
4
/4
R1AB_SARS2 Replicase polyprotein 1ab
7o81[1] NA 28S rRNA AB 100.0
/100.0
5
/5
R1AB_SARS2 Replicase polyprotein 1ab
7o81[1] J A-site Met-tRNA(Met) AB 100.0
/100.0
1
/1
R1AB_SARS2 Replicase polyprotein 1ab
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
139 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6w4h[3] J BDF
beta-D-fructopyranose[12 atoms]
B 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 10
8f4y[1] R XE0
4-[2-(2,4-dichlorophenyl)ethyl]-6-(trifluoromethyl..
B 100.0
/100.0
8
/8
R1AB_SARS2 Non-structural protein 10
8f4y[1] S XE0
4-[2-(2,4-dichlorophenyl)ethyl]-6-(trifluoromethyl..
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
139 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6w4h[28] H ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
6w4h[49] I ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
6w61[14] I ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
6wks[12] F ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
6wks[19] G ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
6yz1[4] E ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 nsp10
7c2i[3] E ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
7jyy[8] O ZN
ZINC ION[1 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
6w75[1] R NA
SODIUM ION[1 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
6w75[2] JA NA
SODIUM ION[1 atoms]
D 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
7jyy[4] I NA
SODIUM ION[1 atoms]
B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
7ult[1] P NA
SODIUM ION[1 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
7ult[2] Q NA
SODIUM ION[1 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
6wrz[2] U CL
CHLORIDE ION[1 atoms]
B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 10
6wvn[1] CA CL
CHLORIDE ION[1 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
139 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6w61[17] G EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 10
6wks[11] H EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 10
7mc5[13] AA EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 10
7mc5[7] BA EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 10
7mc5[1] DA EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
7mc5[1] E EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
7mc5[1] FA EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 10
7mc5[3] R EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
7mc5[1] W EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
7mc5[1] Z EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
8bsd[1] KA EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
8ot0[1] R EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
8oto[1] GA EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
6w75[1] KA FMT
FORMIC ACID[3 atoms]
D 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
6wjt[1] P FMT
FORMIC ACID[3 atoms]
B 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 10
7jz0[1] Q FMT
FORMIC ACID[3 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
7jz0[1] R FMT
FORMIC ACID[3 atoms]
B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 10
7jz0[1] S FMT
FORMIC ACID[3 atoms]
B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 10
7ult[1] GA FMT
FORMIC ACID[3 atoms]
D 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
8f4y[1] T FMT
FORMIC ACID[3 atoms]
B 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 10
6wq3[3] I SO4
SULFATE ION[5 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 10
6wq3[3] N SO4
SULFATE ION[5 atoms]
B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 10
6wq3[2] O SO4
SULFATE ION[5 atoms]
B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 10
7lw4[1] R ACT
ACETATE ION[4 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 10
8rv6[1] I GOL
GLYCEROL[6 atoms]
B 100.0
/100.0
7
/7
R1A_SARS2 Non-structural protein 10
8rv8[2] H GOL
GLYCEROL[6 atoms]
B 100.0
/100.0
6
/6
R1A_SARS2 Non-structural protein 10
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.