#WARNING:no index is registered index "YP_009725304.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725304.1.txt".
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Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
20796 198 144 YP_009725304.1()
QUERYSEQ
AIASEFSSLPSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYA
SALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQ
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [YP_009725304.1()]

198
region name description
1-198 DISORDER predicted by DISOPRED

MONOMER
198
pdb_id a1 identity[%]2 description
8gwe B 100.0 R1AB_SARS2 Non-structural protein 8
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
198 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2ahm[76] A R1AB_CVHSA Replicase polyprotein 1ab, light chain[77 aa] E 100.0
/97.4
24
/24
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[4] A R1AB_CVHSA Replicase polyprotein 1ab, light chain[77 aa] E 100.0
/97.4
5
/5
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[4] A R1AB_CVHSA Replicase polyprotein 1ab, light chain[77 aa] G 100.0
/97.4
3
/3
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[4] D R1AB_CVHSA Replicase polyprotein 1ab, light chain[76 aa] G 100.0
/97.4
8
/8
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
5f22[15] A R1A_CVHSA Non-structural protein 7[79 aa] B 100.0
/96.5
25
/25
R1AB_CVHSA Non-structural protein
6m71[61] B R1AB_SARS2 Non-structural protein 7[70 aa] D 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
6wiq[8] A R1AB_SARS2 Non-structural protein 7[80 aa] B 100.0
/100.0
8
/8
R1AB_SARS2 Non-structural protein 8
7ed5[1] C R1AB_SARS2 Non-structural protein 7[72 aa] B 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 8
7l1f[1] C R1AB_SARS2 Non-structural protein 7[63 aa] B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
6m71[52] A R1AB_SARS2 RNA-directed RNA polymerase[859 aa] C 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
6m71[65] A R1AB_SARS2 RNA-directed RNA polymerase[859 aa] D 100.0
/100.0
42
/42
R1AB_SARS2 Non-structural protein 8
7l1f[1] A R1AB_SARS2 RNA-directed RNA polymerase[832 aa] B 100.0
/100.0
36
/36
R1AB_SARS2 Non-structural protein 8
7re3[2] J R1AB_SARS2 RNA-directed RNA polymerase[927 aa] B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
6xez[63] F R1AB_SARS2 Helicase[596 aa] B 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 8
7egq[1] E R1AB_SARS2 Helicase[588 aa] D 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7rdz[1] E R1AB_SARS2 Helicase[590 aa] D 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7re0[1] E R1AB_SARS2 Helicase[590 aa] B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7egq[1] P R1AB_SARS2 Proofreading exoribonuclease[524 aa] D 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7thm[1] C R1AB_SARS2 Non-structural protein 7[37 aa] D 100.0
/100.0
7
/7
R1AB_SARS2 Non-structural protein 8
6nus[1] A R1AB_CVHSA NSP12[715 aa] B 100.0
/96.4
40
/40
R1A_CVHSA NSP8
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
NUCLEOTIDE
198 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6xez[18] G Product RNA B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
6xez[2] H Template RNA B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
6yyt[4] F RNA product B 100.0
/100.0
4
/4
R1AB_SARS2 nsp8
6yyt[1] G RNA product D 100.0
/100.0
3
/3
R1AB_SARS2 nsp8
7c2k[1] E RNA (29-MER) D 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7cxm[30] E RNA (25-MER) B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7cxm[4] F RNA (26-MER) B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7cyq[2] E Primer B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7cyq[1] F Template B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7cyq[1] F Template D 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 8
7dok[2] A RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*GP*AP*GP*AP*UP*UP.. D 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7ed5[1] E RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*GP*AP*GP*AP*UP*UP.. B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7ed5[1] E RNA (5'-R(P*GP*CP*UP*AP*UP*GP*UP*GP*AP*GP*AP*UP*UP.. D 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 8
7dok[1] B RNA (5'-R(P*CP*CP*CP*UP*AP*UP*AP*AP*CP*UP*UP*AP*AP.. F 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 8
7dte[2] E RNA (57-MER) B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
7dte[2] F RNA (33-MER) B 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 8
7ed5[1] F RNA (5'-R(P*CP*CP*CP*CP*AP*UP*AP*AP*CP*UP*UP*AP*AP.. B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7ed5[1] F RNA (5'-R(P*CP*CP*CP*CP*AP*UP*AP*AP*CP*UP*UP*AP*AP.. D 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 8
7egq[3] T Template RNA B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7eiz[4] H template B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
7krn[6] F RNA (37-MER) B 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 8
7krn[4] G RNA (43-MER) B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 8
7krp[2] F RNA (36-MER) B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
7rdx[2] H Template RNA B 100.0
/100.0
5
/5
R1AB_SARS2 Non-structural protein 8
7rdy[2] H Template RNA B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
7rdz[12] H Template RNA B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 8
7uo4[2] E Product RNA (35-MER) B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
7uo4[2] F Template RNA (55-MER) B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7uo7[2] D Product RNA (35-MER) B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
7uo7[2] E Template RNA (55-MER) B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
7uo9[2] D Product RNA (35-MER) B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7uo9[4] E Template RNA (55-MER) B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7uob[4] E Product RNA (35-MER) B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
7uob[2] F Template RNA (55-MER) B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
7uoe[2] F Template RNA (55-MER) B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 8
8gw1[6] F Template B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
8gwb[12] J template B 100.0
/100.0
6
/6
R1AB_SARS2 Non-structural protein 8
8sq9[2] F Primer RNA B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
8sqj[2] F Primer RNA B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
8sqj[2] G Template RNA B 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
8sqk[1] F Primer RNA B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
8sqk[2] G Template RNA B 100.0
/100.0
1
/1
R1AB_SARS2 Non-structural protein 8
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
198 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7krn[9] T 1N7
CHAPSO[36 atoms]
D 100.0
/100.0
3
/3
R1AB_SARS2 Non-structural protein 8
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
198 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2ahm[12] E R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[155 aa] E 100.0
/97.4
19
/19
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[4] G R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[191 aa] E 100.0
/97.4
8
/8
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[6] H R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[191 aa] E 100.0
/97.4
5
/5
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[4] E R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[155 aa] G 100.0
/97.4
7
/7
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[2] E R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[155 aa] H 100.0
/97.4
7
/7
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
198 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6wqd[2] F EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
6wqd[3] G EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
6xip[1] F EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
7
/7
R1AB_SARS2 Non-structural protein 8
6wtc[1] E ACY
ACETIC ACID[4 atoms]
B 100.0
/100.0
4
/4
R1AB_SARS2 Non-structural protein 8
6wtc[1] F ACY
ACETIC ACID[4 atoms]
D 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 8
2ahm[2] N SO4
SULFATE ION[5 atoms]
H 75.0
/97.4
4
/4
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[6] I GOL
GLYCEROL[6 atoms]
E 100.0
/97.4
2
/2
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[6] I GOL
GLYCEROL[6 atoms]
E 100.0
/97.4
1
/1
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
2ahm[4] J GOL
GLYCEROL[6 atoms]
E 100.0
/97.4
3
/3
R1AB_CVHSA Replicase polyprotein 1ab, heavy chain
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.