#WARNING:no index is registered index "YP_009725297.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725297.1.txt".
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Contact Molecules for Homologous Proteins

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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
13076 180 29 YP_009725297.1()
QUERYSEQ 
MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELG
TDPYEDFQENWNTKHSSGVTRELMRELNGG
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [YP_009725297.1()]

180
region name description
1-180 DISORDER predicted by DISOPRED

MONOMER
180
pdb_id a1 identity[%]2 description
8aou A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
8crm A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
8a4y A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
8a55 A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
8ays A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
7k7p A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
8crk A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
8az8 A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
8crf A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
7eq4 A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
7k3n A 100.0 R1AB_SARS2 Host translation inhibitor nsp1
2gdt A 86.1 R1AB_CVHSA Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
2hsx A 86.1 R1AB_CVHSA Leader protein; p65 homolog; NSP1 (EC 3.4.22.-)
7opl E 88.6 R1A_SARS Non-structural protein 1
7jqc AA 100.0 R1AB_SARS2 Host translation inhibitor nsp1
7jqb AA 100.0 R1AB_SARS2 Host translation inhibitor nsp1
6zlw JA 100.0 R1AB_SARS2 Non-structural protein 1
6zmo JC 100.0 R1AB_SARS2 Non-structural protein 1
6zp4 BB 100.0 R1AB_SARS2 Non-structural protein 1
6zok U 100.0 R1AB_SARS2 Non-structural protein 1
6zoj IA 100.0 R1AB_SARS2 Non-structural protein 1
6zmi HC 100.0 R1AB_SARS2 Non-structural protein 1
6zon VA 100.0 R1AB_SARS2 Host translation inhibitor Nsp1
7k5i JA 100.0 R1AB_SARS2 Host translation inhibitor nsp1
6zmt HA 100.0 R1AB_SARS2 Non-structural protein 1
6zn5 IA 100.0 R1AB_SARS2 Non-structural protein 1
6zme HC 100.0 R1AB_SARS2 Non-structural protein 1
6zm7 HC 100.0 R1AB_SARS2 Non-structural protein 1
8ppk KA 27.0 A0A088DIE1_9BETC Nsp1 
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7jqb I G1T8A2_RABIT eS30[57 aa] AA 100.0
/100.0		 4
/4		 R1AB_SARS2 Host translation inhibitor nsp1
7jqc I G1T8A2_RABIT eS30[57 aa] AA 100.0
/100.0		 4
/4		 R1AB_SARS2 Host translation inhibitor nsp1
7opl A DPOLA_HUMAN DNA polymerase alpha catalytic subunit[1070 aa] E 85.7
/88.6		 14
/14		 R1A_SARS Non-structural protein 1
6zlw C RS2_HUMAN 40S ribosomal protein S2[218 aa] JA 100.0
/100.0		 8
/8		 R1AB_SARS2 Non-structural protein 1
6zm7 SB RS2_HUMAN 40S ribosomal protein S2[222 aa] HC 100.0
/100.0		 6
/6		 R1AB_SARS2 Non-structural protein 1
6zme SB RS2_HUMAN 40S ribosomal protein S2[222 aa] HC 100.0
/100.0		 6
/6		 R1AB_SARS2 Non-structural protein 1
6zmi SB RS2_HUMAN 40S ribosomal protein S2[222 aa] HC 100.0
/100.0		 6
/6		 R1AB_SARS2 Non-structural protein 1
6zmo SB RS2_HUMAN 40S ribosomal protein S2[222 aa] JC 100.0
/100.0		 6
/6		 R1AB_SARS2 Non-structural protein 1
6zmt C RS2_HUMAN 40S ribosomal protein S2[218 aa] HA 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zn5 C RS2_HUMAN 40S ribosomal protein S2[218 aa] IA 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zoj D RS2_HUMAN 40S ribosomal protein S2[218 aa] IA 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zok D RS2_HUMAN 40S ribosomal protein S2[218 aa] U 100.0
/100.0		 6
/6		 R1AB_SARS2 Non-structural protein 1
6zon C RS2_HUMAN 40S ribosomal protein S2[216 aa] VA 100.0
/100.0		 7
/7		 R1AB_SARS2 Host translation inhibitor Nsp1
6zp4 C RS2_HUMAN 40S ribosomal protein S2[216 aa] BB 100.0
/100.0		 8
/8		 R1AB_SARS2 Non-structural protein 1
7jqb F uS5[221 aa] AA 100.0
/100.0		 8
/8		 R1AB_SARS2 Host translation inhibitor nsp1
7jqc F uS5[221 aa] AA 100.0
/100.0		 7
/7		 R1AB_SARS2 Host translation inhibitor nsp1
7k5i S RS2_HUMAN 40S ribosomal protein S2[218 aa] JA 100.0
/100.0		 7
/7		 R1AB_SARS2 Host translation inhibitor nsp1
8ppk E RS2_HUMAN 40S ribosomal protein S2[223 aa] KA 0.0
/27.0		 6
/6		 A0A088DIE1_9BETC Nsp1
6zlw DA RS30_HUMAN 40S ribosomal protein S30[52 aa] JA 100.0
/100.0		 2
/2		 R1AB_SARS2 Non-structural protein 1
6zm7 CC RS30_HUMAN 40S ribosomal protein S30[58 aa] HC 100.0
/100.0		 4
/4		 R1AB_SARS2 Non-structural protein 1
6zme CC RS30_HUMAN 40S ribosomal protein S30[58 aa] HC 100.0
/100.0		 4
/4		 R1AB_SARS2 Non-structural protein 1
6zmi CC RS30_HUMAN 40S ribosomal protein S30[58 aa] HC 100.0
/100.0		 5
/5		 R1AB_SARS2 Non-structural protein 1
6zmo CC RS30_HUMAN 40S ribosomal protein S30[58 aa] JC 100.0
/100.0		 4
/4		 R1AB_SARS2 Non-structural protein 1
6zmt CA RS30_HUMAN 40S ribosomal protein S30[56 aa] HA 100.0
/100.0		 4
/4		 R1AB_SARS2 Non-structural protein 1
6zn5 DA RS30_HUMAN 40S ribosomal protein S30[56 aa] IA 100.0
/100.0		 2
/2		 R1AB_SARS2 Non-structural protein 1
6zoj FA RS30_HUMAN 40S ribosomal protein S30[56 aa] IA 100.0
/100.0		 4
/4		 R1AB_SARS2 Non-structural protein 1
6zok T RS30_HUMAN 40S ribosomal protein S30[56 aa] U 100.0
/100.0		 4
/4		 R1AB_SARS2 Non-structural protein 1
6zon S RS30_HUMAN 40S ribosomal protein S30[44 aa] VA 100.0
/100.0		 1
/1		 R1AB_SARS2 Host translation inhibitor Nsp1
7k5i HA RS30_HUMAN 40S ribosomal protein S30[50 aa] JA 100.0
/100.0		 2
/2		 R1AB_SARS2 Host translation inhibitor nsp1
8ppk GA RS30_HUMAN Small ribosomal subunit protein eS30[59 aa] KA 33.3
/27.0		 6
/8		 A0A088DIE1_9BETC Nsp1
6zlw E RS3_HUMAN 40S ribosomal protein S3[225 aa] JA 100.0
/100.0		 10
/10		 R1AB_SARS2 Non-structural protein 1
6zm7 ZA RS3_HUMAN 40S ribosomal protein S3[227 aa] HC 100.0
/100.0		 6
/6		 R1AB_SARS2 Non-structural protein 1
6zme ZA RS3_HUMAN 40S ribosomal protein S3[227 aa] HC 100.0
/100.0		 5
/5		 R1AB_SARS2 Non-structural protein 1
6zmi ZA RS3_HUMAN 40S ribosomal protein S3[227 aa] HC 100.0
/100.0		 9
/9		 R1AB_SARS2 Non-structural protein 1
6zmo ZA RS3_HUMAN 40S ribosomal protein S3[227 aa] JC 100.0
/100.0		 8
/8		 R1AB_SARS2 Non-structural protein 1
6zmt E RS3_HUMAN 40S ribosomal protein S3[225 aa] HA 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zn5 E RS3_HUMAN 40S ribosomal protein S3[225 aa] IA 100.0
/100.0		 4
/4		 R1AB_SARS2 Non-structural protein 1
6zoj E RS3_HUMAN 40S ribosomal protein S3[225 aa] IA 100.0
/100.0		 10
/10		 R1AB_SARS2 Non-structural protein 1
6zon W RS3_HUMAN 40S ribosomal protein S3[224 aa] VA 100.0
/100.0		 8
/8		 R1AB_SARS2 Host translation inhibitor Nsp1
6zp4 T RS3_HUMAN 40S ribosomal protein S3[224 aa] BB 100.0
/100.0		 9
/9		 R1AB_SARS2 Non-structural protein 1
7jqb H G1TNM3_RABIT Ribosomal protein S3[228 aa] AA 100.0
/100.0		 9
/9		 R1AB_SARS2 Host translation inhibitor nsp1
7jqc H G1TNM3_RABIT Ribosomal protein S3[228 aa] AA 100.0
/100.0		 6
/6		 R1AB_SARS2 Host translation inhibitor nsp1
7k5i D RS3_HUMAN 40S ribosomal protein S3[225 aa] JA 100.0
/100.0		 8
/8		 R1AB_SARS2 Host translation inhibitor nsp1
8ppk F RS3_HUMAN 40S ribosomal protein S3[225 aa] KA 30.0
/27.0		 10
/10		 A0A088DIE1_9BETC Nsp1
8ppk Z A0A4W2DI10_BOBOX 40S ribosomal protein S23[141 aa] KA 100.0
/27.0		 1
/1		 A0A088DIE1_9BETC Nsp1
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
NUCLEOTIDE
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6zlw IA 18S ribosomal RNA JA 100.0
/100.0		 8
/8		 R1AB_SARS2 Non-structural protein 1
7k5i B 40S ribosomal rRNA18S JA 100.0
/100.0		 8
/8		 R1AB_SARS2 Host translation inhibitor nsp1
6zm7 WA 18S ribosomal RNA HC 100.0
/100.0		 9
/9		 R1AB_SARS2 Non-structural protein 1
6zme WA 18S ribosomal RNA HC 100.0
/100.0		 8
/8		 R1AB_SARS2 Non-structural protein 1
6zmi WA 18S ribosomal RNA HC 100.0
/100.0		 8
/8		 R1AB_SARS2 Non-structural protein 1
6zmo WA 18S ribosomal RNA JC 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zmt GA 18S ribosomal RNA HA 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zn5 HA 18S ribosomal RNA IA 100.0
/100.0		 9
/9		 R1AB_SARS2 Non-structural protein 1
6zoj A 18S ribosomal RNA IA 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zok A 18S ribosomal RNA U 100.0
/100.0		 7
/7		 R1AB_SARS2 Non-structural protein 1
6zon T 18S ribosomal RNA VA 100.0
/100.0		 8
/8		 R1AB_SARS2 Host translation inhibitor Nsp1
6zp4 R 18S ribosomal RNA BB 100.0
/100.0		 8
/8		 R1AB_SARS2 Non-structural protein 1
7jqb A rRNA AA 100.0
/100.0		 7
/7		 R1AB_SARS2 Host translation inhibitor nsp1
7jqc A rRNA AA 100.0
/100.0		 7
/7		 R1AB_SARS2 Host translation inhibitor nsp1
8ppk B 18S rRNA KA 40.0
/27.0		 25
/29		 A0A088DIE1_9BETC Nsp1
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
8a4y B QO6
N-(2,3-dihydro-1H-inden-5-yl)acetamide[13 atoms] 		A 100.0
/100.0		 6
/6		 R1AB_SARS2 Host translation inhibitor nsp1
8ays B 92G
4-(2-amino-1,3-thiazol-4-yl)phenol[13 atoms] 		A 100.0
/100.0		 8
/8		 R1AB_SARS2 Host translation inhibitor nsp1
8az8 B OEI
2-[(phenylmethyl)amino]ethanol[11 atoms] 		A 100.0
/100.0		 4
/4		 R1AB_SARS2 Host translation inhibitor nsp1
8crf B NT9
~{N}-methyl-1-(4-thiophen-2-ylphenyl)methanamine[1.. 		A 100.0
/100.0		 7
/7		 R1AB_SARS2 Host translation inhibitor nsp1
8crk B OG3
(1~{R})-1-(4-chlorophenyl)ethanamine[10 atoms] 		A 100.0
/100.0		 3
/3		 R1AB_SARS2 Host translation inhibitor nsp1
8crm B OF6
1-[2-(3-chlorophenyl)-1,3-thiazol-4-yl]-~{N}-methy.. 		A 100.0
/100.0		 8
/8		 R1AB_SARS2 Host translation inhibitor nsp1
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
180 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7k5i KA MG
MAGNESIUM ION[1 atoms] 		JA 100.0
/100.0		 1
/1		 R1AB_SARS2 Host translation inhibitor nsp1
8ppk ZH UNX
UNKNOWN ATOM OR ION[1 atoms] 		KA 100.0
/27.0		 1
/1		 A0A088DIE1_9BETC Nsp1
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.