#WARNING:no index is registered index "YP_009724391.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009724391.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.

Contact Molecules for Homologous Proteins


[Full Bars]

[SiteTable]


Summary Bars[50 %]


[Back to Search Page]

[Back to HOMCOS]

[SupCon3D]

[help]
seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100]
[show] [download] [help]
PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
21131 275 12 YP_009724391.1()
QUERYSEQ
MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWH
TNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [YP_009724391.1()]

275
region name description
1-275 DISORDER predicted by DISOPRED

MONOMER
275
pdb_id a1 identity[%]2 description
7kjr A 100.0 AP3A_SARS2 ORF3a protein
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
275 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
8equ[2] C SAP_HUMAN Saposin-A[80 aa] A 100.0
/100.0
7
/7
AP3A_SARS2 ORF3a protein
8equ[2] F SAP_HUMAN Saposin-A[80 aa] A 100.0
/100.0
1
/1
AP3A_SARS2 ORF3a protein
8equ[2] D Saposin A, polyalanine model[79 aa] A 100.0
/100.0
1
/1
AP3A_SARS2 ORF3a protein
7kjr[4] C APOA1_HUMAN Apolipoprotein A-I[31 aa] A 100.0
/100.0
6
/6
AP3A_SARS2 ORF3a protein
7kjr[4] D APOA1_HUMAN Apolipoprotein A-I[31 aa] A 100.0
/100.0
6
/6
AP3A_SARS2 ORF3a protein
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
275 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7kjr[10] E PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a..
A 100.0
/100.0
4
/4
AP3A_SARS2 ORF3a protein
7kjr[8] F PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a..
A 100.0
/100.0
4
/4
AP3A_SARS2 ORF3a protein
8eqj[6] D PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[22 a..
A 100.0
/100.0
7
/7
AP3A_SARS2 ORF3a protein
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
275 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6xdc[10] B AP3A_SARS2 ORF3a protein[193 aa] A 100.0
/100.0
42
/42
AP3A_SARS2 ORF3a protein
8eqs[2] B AP3A_SARS ORF3a protein[192 aa] A 83.3
/76.6
48
/48
AP3A_SARS ORF3a protein
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.