Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
3207930 | 164 | 29 | P01185(NEU2_HUMAN) | RecName: Full=Vasopressin-neurophysin 2-copeptin;AltName: Full=AVP-NPII;Contains: RecName: Full=Arg-vasopressin; AltName: Full=Arginine-vasopressin;Contains: RecName: Full=Neurophysin 2; AltName: Full=Neurophysin-II;Contains: RecName: Full=Copeptin;Flags: Precursor; |
QUERYSEQ |
MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGFHRRARASDRSNATQLDGPAGALLLRLVQLA GAPEPFEPAQPDAY |
164 | region | name | description |
1-19 | SIGNAL | ||
20-28 | PEPTIDE | /note="Arg-vasopressin" /id="PRO_0000020515" | |
32-124 | CHAIN | /note="Neurophysin 2" /id="PRO_0000020516" | |
126-164 | PEPTIDE | /note="Copeptin" /id="PRO_0000020517" | |
1-164 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
164 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
2bn2 | A | 95.3 | NEU2_BOVIN NEUROPHYSIN II | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
164 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1jk4[2] | B | Lys Vasopressin[6 aa] | A | 100.0 /94.9 |
14 /14 |
NEU2_BOVIN NEUROPHYSIN 2 | |
1npo[5] | B | OXYTOCIN[9 aa] | A | 100.0 /95.1 |
16 /16 |
NEU2_BOVIN NEUROPHYSIN II | |
1npo[2] | B | OXYTOCIN[9 aa] | C | 100.0 /93.7 |
5 /5 |
NEU2_BOVIN NEUROPHYSIN II | |
1npo[2] | C | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 92.3 /95.1 |
13 /13 |
NEU2_BOVIN NEUROPHYSIN II | |
1npo[2] | C | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 100.0 /95.1 |
4 /4 |
NEU2_BOVIN NEUROPHYSIN II | |
1npo[2] | C | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 100.0 /95.1 |
2 /2 |
NEU2_BOVIN NEUROPHYSIN II | |
1npo[2] | A | NEU2_BOVIN NEUROPHYSIN II[81 aa] | C | 100.0 /93.7 |
4 /4 |
NEU2_BOVIN NEUROPHYSIN II | |
1npo[2] | A | NEU2_BOVIN NEUROPHYSIN II[81 aa] | C | 100.0 /93.7 |
4 /4 |
NEU2_BOVIN NEUROPHYSIN II | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
164 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2bn2[4] | E |
PHE
PHENYLALANINE[11 atoms] |
A | 100.0 /95.3 |
7 /7 |
NEU2_BOVIN NEUROPHYSIN II | |
2hnu[12] | F |
PHE
PHENYLALANINE[11 atoms] |
A | 100.0 /82.3 |
7 /7 |
NEU1_BOVIN Oxytocin-neurophysin 1 | |
2bn2[4] | F |
TYR
TYROSINE[12 atoms] |
A | 100.0 /95.3 |
8 /8 |
NEU2_BOVIN NEUROPHYSIN II | |
2hnu[12] | G |
TYR
TYROSINE[13 atoms] |
A | 100.0 /82.3 |
9 /9 |
NEU1_BOVIN Oxytocin-neurophysin 1 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
164 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1jk4[2] | C |
CD
CADMIUM ION[1 atoms] |
A | 100.0 /94.9 |
1 /1 |
NEU2_BOVIN NEUROPHYSIN 2 | |
1jk4[2] | D |
CD
CADMIUM ION[1 atoms] |
A | 100.0 /94.9 |
1 /1 |
NEU2_BOVIN NEUROPHYSIN 2 | |
1jk4[2] | E |
CD
CADMIUM ION[1 atoms] |
A | 100.0 /94.9 |
1 /1 |
NEU2_BOVIN NEUROPHYSIN 2 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
164 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1jk4[4] | A | NEU2_BOVIN NEUROPHYSIN 2[79 aa] | A | 92.3 /94.9 |
13 /13 |
NEU2_BOVIN NEUROPHYSIN 2 | |
1npo[2] | A | NEU2_BOVIN NEUROPHYSIN II[81 aa] | A | 100.0 /95.1 |
7 /7 |
NEU2_BOVIN NEUROPHYSIN II | |
2bn2[4] | B | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 91.7 /95.3 |
12 /12 |
NEU2_BOVIN NEUROPHYSIN II | |
2hnu[18] | B | NEU1_BOVIN Oxytocin-neurophysin 1[81 aa] | A | 66.7 /82.3 |
15 /15 |
NEU1_BOVIN Oxytocin-neurophysin 1 | |
2lbh[2] | B | NEU1_BOVIN Neurophysin 1[92 aa] | A | 66.7 /80.0 |
15 /15 |
NEU1_BOVIN Neurophysin 1 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |