Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
14157 | 529 | 16 | P52292(IMA1_HUMAN) | RecName: Full=Importin subunit alpha-1 ;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha; |
QUERYSEQ |
MSTNENANTPAARLHRFKNKGKDSTEMRRRRIEVNVELRKAKKDDQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASG TSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVK LLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQA AEKLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEEDQNVVPETTSEGYTFQVQDGAPGTFNF |
529 | region | name | description |
2-529 | CHAIN | /note="Importin subunit alpha-1" /id="PRO_0000120722" | |
2-60 | DOMAIN | /note="IBB" | |
71-111 | REPEAT | /note="ARM 1; truncated" | |
112-151 | REPEAT | /note="ARM 2" | |
152-193 | REPEAT | /note="ARM 3" | |
200-244 | REPEAT | /note="ARM 4" | |
246-282 | REPEAT | /note="ARM 5" | |
283-322 | REPEAT | /note="ARM 6" | |
325-364 | REPEAT | /note="ARM 7" | |
367-409 | REPEAT | /note="ARM 8" | |
410-456 | REPEAT | /note="ARM 9" | |
457-496 | REPEAT | /note="ARM 10; atypical" | |
1-27 | REGION | /note="Disordered" | |
43-72 | REGION | /note="Disordered" | |
142-238 | REGION | /note="NLS binding site (major)" | |
315-403 | REGION | /note="NLS binding site (minor)" | |
55-72 | COMPBIAS | /note="Polar residues" | |
1-529 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
529 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
5h43 | A | 100.0 | IMA1_HUMAN Importin subunit alpha-1 | ||||
7cru | B | 100.0 | IMA1_HUMAN Importin subunit alpha-1 | ||||
1qgk | B | 100.0 | IMA2_HUMAN PROTEIN (IMPORTIN ALPHA-2 SUBUNIT) | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
529 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1qgk[3] | A | IMB1_HUMAN PROTEIN (IMPORTIN BETA SUBUNIT)[876 aa] | B | 100.0 /100.0 |
25 /25 |
IMA2_HUMAN PROTEIN (IMPORTIN ALPHA-2 SUBUNIT) | |
3fex[2] | A | NCBP1_HUMAN Nuclear cap-binding protein subunit 1[756 aa] | C | 100.0 /100.0 |
39 /39 |
IMA2_HUMAN Importin subunit alpha-2 | |
4wv6[1] | B | TAF8_HUMAN Transcription initiation factor TFIID subunit 8[9 .. | A | 100.0 /100.0 |
20 /20 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | C | TAF8_HUMAN Transcription initiation factor TFIID subunit 8[3 .. | A | 100.0 /100.0 |
8 /8 |
IMA1_HUMAN Importin subunit alpha-1 | |
5h43[1] | B | KAT8_HUMAN Histone acetyltransferase KAT8[10 aa] | A | 100.0 /100.0 |
21 /21 |
IMA1_HUMAN Importin subunit alpha-1 | |
5h43[1] | C | KAT8_HUMAN Histone acetyltransferase KAT8[15 aa] | A | 100.0 /100.0 |
30 /30 |
IMA1_HUMAN Importin subunit alpha-1 | |
7cru[2] | A | HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K[20 aa] | B | 100.0 /100.0 |
44 /44 |
IMA1_HUMAN Importin subunit alpha-1 | |
7n8j[1] | B | BIMAX2[25 aa] | A | 100.0 /100.0 |
57 /57 |
IMA1_HUMAN Importin subunit alpha-1 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
529 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
8fzk[1] | F |
MG
MAGNESIUM ION[1 atoms] |
C | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
529 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
8fzk[4] | B | IMA1_HUMAN Importin subunit alpha-1[422 aa] | A | 100.0 /100.0 |
42 /42 |
IMA1_HUMAN Importin subunit alpha-1 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
529 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
3wpt[2] | C |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | D |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | E |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
5 /5 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | F |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | G |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | H |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
6 /6 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | I |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | J |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[2] | K |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | L |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[2] | M |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | P |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | R |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
3wpt[1] | S |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[3] | D |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | I |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | K |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | L |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | M |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
4wv6[1] | N |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 | |
7cru[2] | E |
ACT
ACETATE ION[4 atoms] |
B | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 | |
7cru[1] | H |
ACT
ACETATE ION[4 atoms] |
D | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 | |
7cru[1] | I |
ACT
ACETATE ION[4 atoms] |
D | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 | |
7cru[1] | J |
ACT
ACETATE ION[4 atoms] |
D | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 | |
7cru[1] | G |
GOL
GLYCEROL[6 atoms] |
D | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 | |
8fzk[1] | E |
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms] |
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |