HOMCOS(prot_sch_conbars.cgi):

		Contact Molecules for Homologous Proteins
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PID

QueryLength

Homolgous Sequence in PDB

UniProt Query

TITLE

3652451

207

P51149(RAB7A_HUMAN)

RecName: Full=Ras-related protein Rab-7a ; EC=3.6.5.2 ;

QUERYSEQ

MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP
YFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKASAESCSC

[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P51149(RAB7A_HUMAN)]

207
	region	name	description
	2-207	CHAIN	/note="Ras-related protein Rab-7a" /id="PRO_0000121121"
	15-22	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	34-40	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	63-67	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	125-128	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	156-157	BINDING	/ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269\|PubMed:20028791"
	205-205	LIPID	/note="S-geranylgeranyl cysteine"
	207-207	LIPID	/note="S-geranylgeranyl cysteine"
	1-207	DISORDER	predicted by DISOPRED

MONOMER

207

pdb_id a¹ identity[%]² description

1vg8 D 100.0 RAB7_RAT Ras-related protein Rab-7

1vg8 A 100.0 RAB7_RAT Ras-related protein Rab-7

1vg0 B 100.0 RAB7_RAT Ras-related protein Rab-7

1yhn A 99.5 RAB7_HUMAN Ras-related protein Rab-7

1vg8 B 100.0 RAB7_RAT Ras-related protein Rab-7

1vg8 C 100.0 RAB7_RAT Ras-related protein Rab-7

8zq3 A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

3law C 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

3law A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

6wcw A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

3law D 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1t91 B 99.4 RAB7_HUMAN Ras-related protein Rab-7

1t91 A 99.4 RAB7_HUMAN Ras-related protein Rab-7

1t91 D 99.4 RAB7_HUMAN Ras-related protein Rab-7

1t91 C 99.4 RAB7_HUMAN Ras-related protein Rab-7

3law E 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

3law B 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1vg9 H 100.0 RAB7_RAT Ras-related protein Rab-7

1vg9 D 100.0 RAB7_RAT Ras-related protein Rab-7

7f6j B 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

5z2m B 99.4 RAB7A_MOUSE Ras-related protein Rab-7a

8kb8 D 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

8kb8 C 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1vg9 B 100.0 RAB7_RAT Ras-related protein Rab-7

6iyb C 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb A 99.4 RAB7A_HUMAN Ras-related protein Rab-7a

1vg9 F 100.0 RAB7_RAT Ras-related protein Rab-7

5z2m C 99.4 RAB7A_MOUSE Ras-related protein Rab-7a

1vg1 A 100.0 RAB7_RAT Ras-related protein Rab-7

1.a¹:asym_id for the homologue. 2.identity[%]²:sequence identity between the query and the homologue.

HETERO

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1vg0 A RAE1_RAT Rab proteins geranylgeranyltransferase component A.. B 100.0
/100.0 24
/24 RAB7_RAT Ras-related protein Rab-7

1vg9 A RAE1_RAT Rab proteins geranylgeranyltransferase component A.. B 100.0
/100.0 19
/19 RAB7_RAT Ras-related protein Rab-7

1vg9 C RAE1_RAT Rab proteins geranylgeranyltransferase component A.. D 100.0
/100.0 18
/18 RAB7_RAT Ras-related protein Rab-7

1vg9 E RAE1_RAT Rab proteins geranylgeranyltransferase component A.. F 100.0
/100.0 19
/19 RAB7_RAT Ras-related protein Rab-7

1vg9 G RAE1_RAT Rab proteins geranylgeranyltransferase component A.. H 100.0
/100.0 19
/19 RAB7_RAT Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 13
/13 RAB7_HUMAN Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 17
/17 RAB7_HUMAN Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 17
/17 RAB7_HUMAN Ras-related protein Rab-7

1yhn B RILP_HUMAN Rab interacting lysosomal protein[65 aa] A 100.0
/99.5 13
/13 RAB7_HUMAN Ras-related protein Rab-7

6iyb B OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa.. A 100.0
/99.4 12
/12 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb D OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa.. C 100.0
/99.4 11
/11 RAB7A_HUMAN Ras-related protein Rab-7a

8zq3 B OSBL1_HUMAN Oxysterol-binding protein-related protein 1[152 aa.. A 100.0
/99.4 12
/12 RAB7A_HUMAN Ras-related protein Rab-7a

6wcw B RUBIC_HUMAN Run domain Beclin-1-interacting and cysteine-rich .. A 100.0
/99.4 18
/18 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j C PDZD8_HUMAN PDZ domain-containing protein 8[106 aa] A 100.0
/99.4 26
/26 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j C PDZD8_HUMAN PDZ domain-containing protein 8[106 aa] B 100.0
/99.4 19
/19 RAB7A_HUMAN Ras-related protein Rab-7a

8kb8 A WDR91_HUMAN WD repeat-containing protein 91[338 aa] C 100.0
/99.4 17
/17 RAB7A_HUMAN Ras-related protein Rab-7a

8kb8 B WDR91_HUMAN WD repeat-containing protein 91[336 aa] D 100.0
/99.4 15
/15 RAB7A_HUMAN Ras-related protein Rab-7a

5z2m A OSBL1_MOUSE Oxysterol-binding protein-related protein 1[137 aa.. B 88.9
/99.4 9
/9 RAB7A_MOUSE Ras-related protein Rab-7a

5z2m D OSBL1_MOUSE Oxysterol-binding protein-related protein 1[136 aa.. C 100.0
/99.4 7
/7 RAB7A_MOUSE Ras-related protein Rab-7a

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

COMPOUND

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1vg0 F GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] B 100.0
/100.0 17
/17 RAB7_RAT Ras-related protein Rab-7

1vg1 C GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] A 100.0
/100.0 16
/16 RAB7_RAT Ras-related protein Rab-7

1vg9 K GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] B 100.0
/100.0 18
/18 RAB7_RAT Ras-related protein Rab-7

1vg9 O GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] D 100.0
/100.0 16
/16 RAB7_RAT Ras-related protein Rab-7

1vg9 S GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] F 100.0
/100.0 18
/18 RAB7_RAT Ras-related protein Rab-7

1vg9 W GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] H 100.0
/100.0 16
/16 RAB7_RAT Ras-related protein Rab-7

8zq3 C GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] A 100.0
/99.4 17
/17 RAB7A_HUMAN Ras-related protein Rab-7a

1vg8 F GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. A 100.0
/100.0 22
/22 RAB7_RAT Ras-related protein Rab-7

1vg8 H GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. B 100.0
/100.0 24
/24 RAB7_RAT Ras-related protein Rab-7

1vg8 J GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. C 100.0
/100.0 24
/24 RAB7_RAT Ras-related protein Rab-7

1vg8 L GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. D 100.0
/100.0 23
/23 RAB7_RAT Ras-related protein Rab-7

3law G GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. A 95.7
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

3law I GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. B 95.2
/99.4 21
/21 RAB7A_HUMAN Ras-related protein Rab-7a

3law K GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. C 95.7
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

3law M GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. D 96.0
/99.4 25
/25 RAB7A_HUMAN Ras-related protein Rab-7a

3law O GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. E 95.8
/99.4 24
/24 RAB7A_HUMAN Ras-related protein Rab-7a

1t91 F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1t91 H GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] B 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1t91 J GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] C 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1t91 L GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] D 100.0
/99.4 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1yhn D GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.5 23
/23 RAB7_HUMAN Ras-related protein Rab-7

1yhn D GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.5 23
/23 RAB7_HUMAN Ras-related protein Rab-7

5z2m F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] B 100.0
/99.4 23
/23 RAB7A_MOUSE Ras-related protein Rab-7a

5z2m G GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] C 100.0
/99.4 24
/24 RAB7A_MOUSE Ras-related protein Rab-7a

6iyb F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 25
/25 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb H GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] C 100.0
/99.4 22
/22 RAB7A_HUMAN Ras-related protein Rab-7a

6wcw C GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j E GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] A 100.0
/99.4 24
/24 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j G GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] B 100.0
/99.4 23
/23 RAB7A_HUMAN Ras-related protein Rab-7a

8kb8 F GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] C 96.0
/99.4 25
/25 RAB7A_HUMAN Ras-related protein Rab-7a

8kb8 H GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] D 100.0
/99.4 22
/22 RAB7A_HUMAN Ras-related protein Rab-7a

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

METAL

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1vg9 J K
POTASSIUM ION[1 atoms] B 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg9 N K
POTASSIUM ION[1 atoms] D 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg9 R K
POTASSIUM ION[1 atoms] F 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg9 V K
POTASSIUM ION[1 atoms] H 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1t91 E MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1t91 G MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1t91 I MG
MAGNESIUM ION[1 atoms] C 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1t91 K MG
MAGNESIUM ION[1 atoms] D 100.0
/99.4 2
/2 RAB7_HUMAN Ras-related protein Rab-7

1vg0 E MG
MAGNESIUM ION[1 atoms] B 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg1 B MG
MAGNESIUM ION[1 atoms] A 100.0
/100.0 1
/1 RAB7_RAT Ras-related protein Rab-7

1vg8 E MG
MAGNESIUM ION[1 atoms] A 100.0
/100.0 3
/3 RAB7_RAT Ras-related protein Rab-7

1vg8 G MG
MAGNESIUM ION[1 atoms] B 100.0
/100.0 3
/3 RAB7_RAT Ras-related protein Rab-7

1vg8 I MG
MAGNESIUM ION[1 atoms] C 100.0
/100.0 3
/3 RAB7_RAT Ras-related protein Rab-7

1vg8 K MG
MAGNESIUM ION[1 atoms] D 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 I MG
MAGNESIUM ION[1 atoms] B 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 M MG
MAGNESIUM ION[1 atoms] D 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 Q MG
MAGNESIUM ION[1 atoms] F 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1vg9 U MG
MAGNESIUM ION[1 atoms] H 100.0
/100.0 2
/2 RAB7_RAT Ras-related protein Rab-7

1yhn C MG
MAGNESIUM ION[1 atoms] A 100.0
/99.5 5
/5 RAB7_HUMAN Ras-related protein Rab-7

1yhn C MG
MAGNESIUM ION[1 atoms] A 100.0
/99.5 5
/5 RAB7_HUMAN Ras-related protein Rab-7

3law F MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law H MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law J MG
MAGNESIUM ION[1 atoms] C 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law L MG
MAGNESIUM ION[1 atoms] D 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

3law N MG
MAGNESIUM ION[1 atoms] E 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

5z2m E MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 3
/3 RAB7A_MOUSE Ras-related protein Rab-7a

6iyb E MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 2
/2 RAB7A_HUMAN Ras-related protein Rab-7a

6iyb G MG
MAGNESIUM ION[1 atoms] C 100.0
/99.4 3
/3 RAB7A_HUMAN Ras-related protein Rab-7a

6wcw D MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 5
/5 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j D MG
MAGNESIUM ION[1 atoms] A 100.0
/99.4 3
/3 RAB7A_HUMAN Ras-related protein Rab-7a

7f6j F MG
MAGNESIUM ION[1 atoms] B 100.0
/99.4 2
/2 RAB7A_HUMAN Ras-related protein Rab-7a

8kb8 E MG
MAGNESIUM ION[1 atoms] C 100.0
/99.4 4
/4 RAB7A_HUMAN Ras-related protein Rab-7a

8kb8 G MG
MAGNESIUM ION[1 atoms] D 100.0
/99.4 3
/3 RAB7A_HUMAN Ras-related protein Rab-7a

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

PRECIPITANT

207 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

1vg0 G PG4
TETRAETHYLENE GLYCOL[13 atoms] B 100.0
/100.0 4
/4 RAB7_RAT Ras-related protein Rab-7

1vg9 L P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] B 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

1vg9 P P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] D 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

1vg9 T P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] F 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

1vg9 X P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] H 100.0
/100.0 5
/5 RAB7_RAT Ras-related protein Rab-7

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

MONOMER
207
	pdb_id	a¹	identity[%]²	description
	1vg8	D	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg8	A	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg0	B	100.0	RAB7_RAT Ras-related protein Rab-7
	1yhn	A	99.5	RAB7_HUMAN Ras-related protein Rab-7
	1vg8	B	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg8	C	100.0	RAB7_RAT Ras-related protein Rab-7
	8zq3	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	C	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	6wcw	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	D	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1t91	B	99.4	RAB7_HUMAN Ras-related protein Rab-7
	1t91	A	99.4	RAB7_HUMAN Ras-related protein Rab-7
	1t91	D	99.4	RAB7_HUMAN Ras-related protein Rab-7
	1t91	C	99.4	RAB7_HUMAN Ras-related protein Rab-7
	3law	E	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	B	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1vg9	H	100.0	RAB7_RAT Ras-related protein Rab-7
	1vg9	D	100.0	RAB7_RAT Ras-related protein Rab-7
	7f6j	B	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	5z2m	B	99.4	RAB7A_MOUSE Ras-related protein Rab-7a
	8kb8	D	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	8kb8	C	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1vg9	B	100.0	RAB7_RAT Ras-related protein Rab-7
	6iyb	C	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	A	99.4	RAB7A_HUMAN Ras-related protein Rab-7a
	1vg9	F	100.0	RAB7_RAT Ras-related protein Rab-7
	5z2m	C	99.4	RAB7A_MOUSE Ras-related protein Rab-7a
	1vg1	A	100.0	RAB7_RAT Ras-related protein Rab-7
	1.a¹:asym_id for the homologue. 2.identity[%]²:sequence identity between the query and the homologue.

HETERO
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1vg0	A	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	B	100.0 /100.0	24 /24	RAB7_RAT Ras-related protein Rab-7
	1vg9	A	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	B	100.0 /100.0	19 /19	RAB7_RAT Ras-related protein Rab-7
	1vg9	C	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	D	100.0 /100.0	18 /18	RAB7_RAT Ras-related protein Rab-7
	1vg9	E	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	F	100.0 /100.0	19 /19	RAB7_RAT Ras-related protein Rab-7
	1vg9	G	RAE1_RAT Rab proteins geranylgeranyltransferase component A..	H	100.0 /100.0	19 /19	RAB7_RAT Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	13 /13	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	17 /17	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	17 /17	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	B	RILP_HUMAN Rab interacting lysosomal protein[65 aa]	A	100.0 /99.5	13 /13	RAB7_HUMAN Ras-related protein Rab-7
	6iyb	B	OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa..	A	100.0 /99.4	12 /12	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	D	OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa..	C	100.0 /99.4	11 /11	RAB7A_HUMAN Ras-related protein Rab-7a
	8zq3	B	OSBL1_HUMAN Oxysterol-binding protein-related protein 1[152 aa..	A	100.0 /99.4	12 /12	RAB7A_HUMAN Ras-related protein Rab-7a
	6wcw	B	RUBIC_HUMAN Run domain Beclin-1-interacting and cysteine-rich ..	A	100.0 /99.4	18 /18	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	C	PDZD8_HUMAN PDZ domain-containing protein 8[106 aa]	A	100.0 /99.4	26 /26	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	C	PDZD8_HUMAN PDZ domain-containing protein 8[106 aa]	B	100.0 /99.4	19 /19	RAB7A_HUMAN Ras-related protein Rab-7a
	8kb8	A	WDR91_HUMAN WD repeat-containing protein 91[338 aa]	C	100.0 /99.4	17 /17	RAB7A_HUMAN Ras-related protein Rab-7a
	8kb8	B	WDR91_HUMAN WD repeat-containing protein 91[336 aa]	D	100.0 /99.4	15 /15	RAB7A_HUMAN Ras-related protein Rab-7a
	5z2m	A	OSBL1_MOUSE Oxysterol-binding protein-related protein 1[137 aa..	B	88.9 /99.4	9 /9	RAB7A_MOUSE Ras-related protein Rab-7a
	5z2m	D	OSBL1_MOUSE Oxysterol-binding protein-related protein 1[136 aa..	C	100.0 /99.4	7 /7	RAB7A_MOUSE Ras-related protein Rab-7a
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1vg0	F	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	B	100.0 /100.0	17 /17	RAB7_RAT Ras-related protein Rab-7
	1vg1	C	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	A	100.0 /100.0	16 /16	RAB7_RAT Ras-related protein Rab-7
	1vg9	K	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	B	100.0 /100.0	18 /18	RAB7_RAT Ras-related protein Rab-7
	1vg9	O	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	D	100.0 /100.0	16 /16	RAB7_RAT Ras-related protein Rab-7
	1vg9	S	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	F	100.0 /100.0	18 /18	RAB7_RAT Ras-related protein Rab-7
	1vg9	W	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	H	100.0 /100.0	16 /16	RAB7_RAT Ras-related protein Rab-7
	8zq3	C	GDP GUANOSINE-5'-DIPHOSPHATE[28 atoms]	A	100.0 /99.4	17 /17	RAB7A_HUMAN Ras-related protein Rab-7a
	1vg8	F	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	A	100.0 /100.0	22 /22	RAB7_RAT Ras-related protein Rab-7
	1vg8	H	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	B	100.0 /100.0	24 /24	RAB7_RAT Ras-related protein Rab-7
	1vg8	J	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	C	100.0 /100.0	24 /24	RAB7_RAT Ras-related protein Rab-7
	1vg8	L	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	D	100.0 /100.0	23 /23	RAB7_RAT Ras-related protein Rab-7
	3law	G	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	A	95.7 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	I	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	B	95.2 /99.4	21 /21	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	K	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	C	95.7 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	M	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	D	96.0 /99.4	25 /25	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	O	GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato..	E	95.8 /99.4	24 /24	RAB7A_HUMAN Ras-related protein Rab-7a
	1t91	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1t91	H	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	B	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1t91	J	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	C	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1t91	L	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	D	100.0 /99.4	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	D	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.5	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	D	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.5	23 /23	RAB7_HUMAN Ras-related protein Rab-7
	5z2m	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	B	100.0 /99.4	23 /23	RAB7A_MOUSE Ras-related protein Rab-7a
	5z2m	G	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	C	100.0 /99.4	24 /24	RAB7A_MOUSE Ras-related protein Rab-7a
	6iyb	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	25 /25	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	H	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	C	100.0 /99.4	22 /22	RAB7A_HUMAN Ras-related protein Rab-7a
	6wcw	C	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	E	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	A	100.0 /99.4	24 /24	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	G	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	B	100.0 /99.4	23 /23	RAB7A_HUMAN Ras-related protein Rab-7a
	8kb8	F	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	C	96.0 /99.4	25 /25	RAB7A_HUMAN Ras-related protein Rab-7a
	8kb8	H	GTP GUANOSINE-5'-TRIPHOSPHATE[32 atoms]	D	100.0 /99.4	22 /22	RAB7A_HUMAN Ras-related protein Rab-7a
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1vg9	J	K POTASSIUM ION[1 atoms]	B	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg9	N	K POTASSIUM ION[1 atoms]	D	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg9	R	K POTASSIUM ION[1 atoms]	F	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg9	V	K POTASSIUM ION[1 atoms]	H	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1t91	E	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1t91	G	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1t91	I	MG MAGNESIUM ION[1 atoms]	C	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1t91	K	MG MAGNESIUM ION[1 atoms]	D	100.0 /99.4	2 /2	RAB7_HUMAN Ras-related protein Rab-7
	1vg0	E	MG MAGNESIUM ION[1 atoms]	B	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg1	B	MG MAGNESIUM ION[1 atoms]	A	100.0 /100.0	1 /1	RAB7_RAT Ras-related protein Rab-7
	1vg8	E	MG MAGNESIUM ION[1 atoms]	A	100.0 /100.0	3 /3	RAB7_RAT Ras-related protein Rab-7
	1vg8	G	MG MAGNESIUM ION[1 atoms]	B	100.0 /100.0	3 /3	RAB7_RAT Ras-related protein Rab-7
	1vg8	I	MG MAGNESIUM ION[1 atoms]	C	100.0 /100.0	3 /3	RAB7_RAT Ras-related protein Rab-7
	1vg8	K	MG MAGNESIUM ION[1 atoms]	D	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	I	MG MAGNESIUM ION[1 atoms]	B	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	M	MG MAGNESIUM ION[1 atoms]	D	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	Q	MG MAGNESIUM ION[1 atoms]	F	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1vg9	U	MG MAGNESIUM ION[1 atoms]	H	100.0 /100.0	2 /2	RAB7_RAT Ras-related protein Rab-7
	1yhn	C	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.5	5 /5	RAB7_HUMAN Ras-related protein Rab-7
	1yhn	C	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.5	5 /5	RAB7_HUMAN Ras-related protein Rab-7
	3law	F	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	H	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	J	MG MAGNESIUM ION[1 atoms]	C	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	L	MG MAGNESIUM ION[1 atoms]	D	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	3law	N	MG MAGNESIUM ION[1 atoms]	E	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	5z2m	E	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	3 /3	RAB7A_MOUSE Ras-related protein Rab-7a
	6iyb	E	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	2 /2	RAB7A_HUMAN Ras-related protein Rab-7a
	6iyb	G	MG MAGNESIUM ION[1 atoms]	C	100.0 /99.4	3 /3	RAB7A_HUMAN Ras-related protein Rab-7a
	6wcw	D	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	5 /5	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	D	MG MAGNESIUM ION[1 atoms]	A	100.0 /99.4	3 /3	RAB7A_HUMAN Ras-related protein Rab-7a
	7f6j	F	MG MAGNESIUM ION[1 atoms]	B	100.0 /99.4	2 /2	RAB7A_HUMAN Ras-related protein Rab-7a
	8kb8	E	MG MAGNESIUM ION[1 atoms]	C	100.0 /99.4	4 /4	RAB7A_HUMAN Ras-related protein Rab-7a
	8kb8	G	MG MAGNESIUM ION[1 atoms]	D	100.0 /99.4	3 /3	RAB7A_HUMAN Ras-related protein Rab-7a
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
207	pdb_id	contact mol		homologue
	pdb_id	a³	description	a⁴	identity[%]⁵	Ncon⁶	description
	1vg0	G	PG4 TETRAETHYLENE GLYCOL[13 atoms]	B	100.0 /100.0	4 /4	RAB7_RAT Ras-related protein Rab-7
	1vg9	L	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	B	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	1vg9	P	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	D	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	1vg9	T	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	F	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	1vg9	X	P33 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms]	H	100.0 /100.0	5 /5	RAB7_RAT Ras-related protein Rab-7
	3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

Contact Molecules for Homologous Proteins

Full Bars[90 %]

UniProt Feature Tables [P51149(RAB7A_HUMAN)]