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		Contact Molecules for Homologous Proteins
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PID

QueryLength

Homolgous Sequence in PDB

UniProt Query

TITLE

14620

1255

P59594(SPIKE_SARS)

RecName: Full=Spike glycoprotein ; Short=S glycoprotein ;AltName: Full=E2 ;AltName: Full=Peplomer protein ;Contains: RecName: Full=Spike protein S1 ;Contains: RecName: Full=Spike protein S2 ;Contains: RecName: Full=Spike protein S2' ;Flags: Precursor;

QUERYSEQ

MFIFLLFLTLTSGSDLDRCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCDNPFFAVSKPMGTQTHT
MIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIY
QTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRP
FERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQD
VNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALS
GIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYE
NQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYV
PSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWL
GFIAGLIAIVMVTILLCCMTSCCSCLKGACSCGSCCKFDEDDSEPVLKGVKLHYT

[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P59594(SPIKE_SARS)]

1255
	region	name	description
	1-13	SIGNAL
	14-1255	CHAIN	/note="Spike glycoprotein" /id="PRO_0000037208"
	14-667	CHAIN	/note="Spike protein S1" /id="PRO_0000037209"
	668-1255	CHAIN	/note="Spike protein S2" /id="PRO_0000037210"
	798-1255	CHAIN	/note="Spike protein S2'" /id="PRO_0000444082"
	14-1195	TOPO_DOM	/note="Extracellular"
	1196-1216	TRANSMEM	/note="Helical"
	1217-1255	TOPO_DOM	/note="Cytoplasmic"
	14-290	DOMAIN	/note="BetaCoV S1-NTD"
	321-513	DOMAIN	/note="BetaCoV S1-CTD"
	306-527	REGION	/note="Receptor-binding domain (RBD)"
	424-494	REGION	/note="Receptor-binding motif; binding to human ACE2"
	798-819	REGION	/note="Fusion peptide 1" ECO:0000305\|PubMed:29056462"
	817-837	REGION	/note="Fusion peptide 2" ECO:0000305\|PubMed:29056462"
	902-952	REGION	/note="Heptad repeat 1"
	1145-1184	REGION	/note="Heptad repeat 2"
	931-975	COILED
	1157-1185	COILED
	1-1255	DISORDER	predicted by DISOPRED

MONOMER

1255

pdb_id a¹ identity[%]² description

7sg4 B 99.8 SPIKE_SARS Spike glycoprotein

7akj B 99.6 Q5DIC5_CVHSA Spike glycoprotein

1.a¹:asym_id for the homologue. 2.identity[%]²:sequence identity between the query and the homologue.

HETERO

1255 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

7sg4[1] D DH1047 Heavy chain[232 aa] A 100.0
/99.8 18
/18 SPIKE_SARS Spike glycoprotein

7sg4[1] E DH1047 light chain[220 aa] A 100.0
/99.8 14
/14 SPIKE_SARS Spike glycoprotein

6acg[3] D ACE2_HUMAN Angiotensin-converting enzyme 2[597 aa] C 100.0
/100.0 16
/16 SPIKE_CVHSA Spike glycoprotein

6cs2[1] D ACE2_HUMAN Angiotensin-converting enzyme 2[544 aa] B 100.0
/99.7 19
/19 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6nb6[1] E S230 heavy chain[124 aa] B 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb6[1] D S230 heavy chain[123 aa] C 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb6[5] G S230 light chain[109 aa] B 100.0
/99.7 3
/3 SPIKE_CVHSA Spike glycoprotein

7akj[3] C 47D11 neutralizing antibody heavy chain[120 aa] A 100.0
/99.6 10
/10 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] D 47D11 neutralizing antibody light chain[106 aa] A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] I 47D11 neutralizing antibody light chain[106 aa] A 100.0
/99.6 3
/3 Q5DIC5_CVHSA Spike glycoprotein

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

COMPOUND

1255 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

5x58[31] AA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 4
/4 Spike glycoprotein

5x58[41] D NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 Spike glycoprotein

5x58[101] E NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 Spike glycoprotein

5x58[8] F NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 Spike glycoprotein

5x58[25] FA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 Spike glycoprotein

5x58[3] GA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 Spike glycoprotein

5x58[13] H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 Spike glycoprotein

5x58[3] I NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 6
/6 Spike glycoprotein

5x58[15] J NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 Spike glycoprotein

5x58[5] JA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 Spike glycoprotein

5x58[11] K NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 Spike glycoprotein

5x58[12] L NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 Spike glycoprotein

5x58[34] M NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 Spike glycoprotein

5x58[36] N NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 4
/4 Spike glycoprotein

5x58[21] O NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 Spike glycoprotein

5x58[5] Z NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 Spike glycoprotein

6crw[14] Z NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crx[18] HA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.7 5
/5 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6nb6[9] TA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[6] UA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[3] WA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb6[4] XA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.7 3
/3 SPIKE_CVHSA Spike glycoprotein

6nb6[7] ZA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

7akj[3] CA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] DA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.6 2
/2 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] EA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] IA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] JA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.6 2
/2 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] KA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.6 2
/2 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] TA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7sg4[3] F NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 4
/4 SPIKE_SARS Spike glycoprotein

7sg4[3] I NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

7sg4[3] IA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

7sg4[3] J NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 4
/4 SPIKE_SARS Spike glycoprotein

7sg4[3] K NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 4
/4 SPIKE_SARS Spike glycoprotein

7sg4[3] L NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

7sg4[3] M NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

7sg4[3] N NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

7sg4[3] Q NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 9
/9 SPIKE_SARS Spike glycoprotein

7sg4[3] R NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

7sg4[3] S NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

7sg4[2] T NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

7sg4[1] YA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. C 100.0
/99.8 5
/5 SPIKE_SARS Spike glycoprotein

7zh1[3] FA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 2
/2 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 2
/2 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] IA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 1
/1 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] J NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 2
/2 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] K NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 1
/1 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] M NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 1
/1 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] O NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 3
/3 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] P NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 3
/3 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh2[3] GA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.9 2
/2 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh2[2] HA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. B 100.0
/99.9 1
/1 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

8h0x[16] AA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h0x[15] DA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

8h0x[19] E NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h0x[33] G NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

8h0x[21] K NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

8h0x[22] L NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

8h0x[8] M NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

8h0x[15] N NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h0x[20] O NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h0x[23] Q NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 4
/4 SPIKE_SARS Spike glycoprotein

8h0x[18] R NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h0x[12] UA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h0x[16] Y NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

8h0y[9] W NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h12[3] AA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

8h12[3] G NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 4
/4 SPIKE_SARS Spike glycoprotein

8h12[3] N NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h12[6] R NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

8h12[2] SA NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h12[2] Y NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/99.8 1
/1 SPIKE_SARS Spike glycoprotein

8h16[1] R NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. A 100.0
/100.0 1
/1 SPIKE_SARS Spike glycoprotein

8h0x[11] S BLA
BILIVERDINE IX ALPHA[43 atoms] A 100.0
/99.8 11
/11 SPIKE_SARS Spike glycoprotein

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

OTHERPOLY

1255 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

6crw[4] G 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.7 4
/4 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[8] H 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.7 4
/4 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[10] I 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[5] J 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[6] M 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[5] P 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 3
/3 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[6] S 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[6] S 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. C 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crx[2] BA 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crx[4] I 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.7 5
/5 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crx[7] L 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crx[2] W 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. C 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crx[2] Y 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. C 100.0
/99.7 3
/3 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crz[2] P 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. C 100.0
/99.7 4
/4 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs1[2] T 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6nb6[1] U 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb7[1] KA 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb7[2] BA 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb7[2] W 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb7[1] KA 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. C 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb7[1] PA 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. C 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

7akj[3] L 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.6 4
/4 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] M 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] O 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.6 4
/4 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] X 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] Y 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.6 1
/1 Q5DIC5_CVHSA Spike glycoprotein

7zh1[3] D 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.9 1
/1 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] F 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.9 6
/6 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh2[3] F 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.9 3
/3 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

8h0z[7] D 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

8h0z[7] F 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.8 4
/4 SPIKE_SARS Spike glycoprotein

8h12[3] D 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.8 2
/2 SPIKE_SARS Spike glycoprotein

8h12[3] E 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.8 5
/5 SPIKE_SARS Spike glycoprotein

6crw[9] D beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[5] L beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 3
/3 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[9] N beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 5
/5 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[4] W beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. C 100.0
/99.7 5
/5 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crx[7] F beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. C 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crz[3] R beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crz[5] N beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 4
/4 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crz[3] R beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. C 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs2[1] V beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6nb6[6] H beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[4] I beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[1] IA beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[5] J beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb6[6] K beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 3
/3 SPIKE_CVHSA Spike glycoprotein

6nb6[6] L beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[5] N beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[5] Y beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/99.7 3
/3 SPIKE_CVHSA Spike glycoprotein

6nb6[4] CA beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 4
/4 SPIKE_CVHSA Spike glycoprotein

6nb6[2] J beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 1
/1 SPIKE_CVHSA Spike glycoprotein

6nb6[5] W beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[2] Z beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[1] HA beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. C 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[2] IA beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. C 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[2] SA beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. C 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6crw[7] E alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. A 100.0
/99.7 3
/3 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[3] F alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. A 100.0
/99.7 3
/3 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[7] T alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. A 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[6] O alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. B 100.0
/99.7 4
/4 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6crw[1] R alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. C 100.0
/99.7 5
/5 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs2[1] P alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. B 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6nb7[2] T alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. A 100.0
/99.7 4
/4 SPIKE_CVHSA Spike glycoprotein

6cs1[1] G alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 100.0
/99.7 4
/4 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs1[1] H alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 100.0
/99.7 4
/4 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs1[1] S alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. B 100.0
/99.7 1
/1 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs1[1] S alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. C 100.0
/99.7 2
/2 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6nb6[2] M alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6nb6[6] O alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 100.0
/99.7 5
/5 SPIKE_CVHSA Spike glycoprotein

6nb6[2] P alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 100.0
/99.7 4
/4 SPIKE_CVHSA Spike glycoprotein

6nb6[2] Q alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 100.0
/99.7 4
/4 SPIKE_CVHSA Spike glycoprotein

6nb6[3] R alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

6crw[3] U alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(.. C 100.0
/99.7 3
/3 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs2[1] U alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(.. B 100.0
/99.7 3
/3 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6nb6[2] DA alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(.. B 100.0
/99.7 5
/5 SPIKE_CVHSA Spike glycoprotein

6nb7[1] GA alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(.. B 100.0
/99.7 2
/2 SPIKE_CVHSA Spike glycoprotein

7akj[3] K 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. A 100.0
/99.6 5
/5 Q5DIC5_CVHSA Spike glycoprotein

7akj[3] N alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-.. A 100.0
/99.6 3
/3 Q5DIC5_CVHSA Spike glycoprotein

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

HOMO

1255 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

5x58[53] B Spike glycoprotein[1053 aa] A 100.0
/99.8 110
/110 Spike glycoprotein

5x58[50] C Spike glycoprotein[1052 aa] A 100.0
/99.8 93
/93 Spike glycoprotein

5xlr[21] B SPIKE_CVHSA Spike glycoprotein[1022 aa] A 100.0
/100.0 69
/69 SPIKE_CVHSA Spike glycoprotein

5xlr[21] C SPIKE_CVHSA Spike glycoprotein[1022 aa] A 100.0
/100.0 77
/77 SPIKE_CVHSA Spike glycoprotein

6nb6[6] B SPIKE_CVHSA Spike glycoprotein[1026 aa] A 100.0
/99.7 61
/61 SPIKE_CVHSA Spike glycoprotein

6nb6[6] C SPIKE_CVHSA Spike glycoprotein[1055 aa] A 100.0
/99.7 71
/71 SPIKE_CVHSA Spike glycoprotein

7akj[3] B Q5DIC5_CVHSA Spike glycoprotein[1084 aa] A 100.0
/99.6 60
/60 Q5DIC5_CVHSA Spike glycoprotein

7zh1[3] B SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin[1020 aa] A 100.0
/99.9 95
/95 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] C SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin[1020 aa] A 100.0
/99.9 104
/104 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh5[1] C SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin[962 aa] A 100.0
/100.0 76
/76 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh5[1] A SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin[904 aa] C 100.0
/100.0 74
/74 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

8h16[1] B SPIKE_SARS Spike glycoprotein[805 aa] A 100.0
/100.0 60
/60 SPIKE_SARS Spike glycoprotein

8h16[1] B SPIKE_SARS Spike glycoprotein[805 aa] C 100.0
/100.0 77
/77 SPIKE_SARS Spike glycoprotein

8h13[3] B SPIKE_SARS Spike glycoprotein[931 aa] A 98.6
/99.8 72
/72 SPIKE_SARS Spike glycoprotein

8h13[3] C SPIKE_SARS Spike glycoprotein[931 aa] A 98.4
/99.8 62
/62 SPIKE_SARS Spike glycoprotein

6cs2[1] A SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin[891 aa] B 100.0
/99.7 64
/64 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

6cs2[1] C SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin[893 aa] B 98.6
/99.7 72
/72 SPIKE_CVHSA D9IEJ2_BPT4 Spike glycoprotein,Fibritin

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

PRECIPITANT

1255 pdb_id contact mol homologue

a³ description a⁴ identity[%]⁵ Ncon⁶ description

7zh1[3] CA EIC
LINOLEIC ACID[20 atoms] A 100.0
/99.9 3
/3 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh1[3] G EIC
LINOLEIC ACID[20 atoms] A 100.0
/99.9 8
/8 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

7zh2[3] G EIC
LINOLEIC ACID[20 atoms] A 100.0
/99.9 11
/11 SPIKE_SARS WAC_BPT4 Spike glycoprotein,Fibritin

8h0x[15] D EIC
LINOLEIC ACID[20 atoms] A 100.0
/99.8 11
/11 SPIKE_SARS Spike glycoprotein

8h0x[14] T EIC
LINOLEIC ACID[20 atoms] A 100.0
/99.8 3
/3 SPIKE_SARS Spike glycoprotein

3.a³:asym_id for the contact molecule. 4.a⁴:asym_id for the template homologue. 5.identity[%]⁵:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon⁶:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.

MONOMER
1255
	pdb_id	a¹	identity[%]²	description
	7sg4	B	99.8	SPIKE_SARS Spike glycoprotein
	7akj	B	99.6	Q5DIC5_CVHSA Spike glycoprotein
	1.a¹:asym_id for the homologue. 2.identity[%]²:sequence identity between the query and the homologue.

Contact Molecules for Homologous Proteins

Summary Bars[90 %]

UniProt Feature Tables [P59594(SPIKE_SARS)]