Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
19598 4382 499 P0C6U8(R1A_SARS) RecName: Full=Replicase polyprotein 1a; Short=pp1a;AltName: Full=ORF1a polyprotein;Contains: RecName: Full=Host translation inhibitor nsp1; AltName: Full=Leader protein; AltName: Full=Non-structural protein 1; Short=nsp1;Contains: RecName: Full=Non-structural protein 2; Short=nsp2; AltName: Full=p65 homolog;Contains: RecName: Full=Papain-like protease nsp3; Short=PL-PRO; EC=3.4.19.12 ; EC=3.4.22.- ; AltName: Full=Non-structural protein 3; Short=nsp3; AltName: Full=PL2-PRO;Contains: RecName: Full=Non-structural protein 4; Short=nsp4;Contains: RecName: Full=3C-like proteinase nsp5; Short=3CL-PRO; Short=3CLp; EC=3.4.22.69 ; AltName: Full=Main protease; Short=Mpro; AltName: Full=Non-structural protein 5; Short=nsp5; AltName: Full=SARS coronavirus main proteinase;Contains: RecName: Full=Non-structural protein 6; Short=nsp6;Contains: RecName: Full=Non-structural protein 7; Short=nsp7;Contains: RecName: Full=Non-structural protein 8; Short=nsp8;Contains: RecName: Full=RNA-capping enzyme subunit nsp9; AltName: Full=Non-structural protein 9; Short=nsp9; EC=2.7.7.50;Contains: RecName: Full=Non-structural protein 10; Short=nsp10; AltName: Full=Growth factor-like peptide; Short=GFL;Contains: RecName: Full=Non-structural protein 11; Short=nsp11;
QUERYSEQ
MESLVLGVNEKTHVQLSLPVLQVRDVLVRGFGDSVEEALSEAREHLKNGTCGLVELEKGVLPQLEQPYVFIKRSDALSTNHGHKVVELVAEMDGIQYGRSGITLGVLVPHVGETPIAYRNVLLRKNGNKGAGGHSYGIDLKSYDLGDELG
TDPIEDYEQNWNTKHGSGALRELTRELNGGAVTRYVDNNFCGPDGYPLDCIKDFLARAGKSMCTLSEQLDYIESKRGVYCCRDHEHEIAWFTERSDKSYEHQTPFEIKSAKKFDTFKGECPKFVFPLNSKVKVIQPRVEKKKTEGFMGRI
RSVYPVASPQECNNMHLSTLMKCNHCDEVSWQTCDFLKATCEHCGTENLVIEGPTTCGYLPTNAVVKMPCPACQDPEIGPEHSVADYHNHSNIETRLRKGGRTRCFGGCVFAYVGCYNKRAYWVPRASADIGSGHTGITGDNVETLNEDL
LEILSRERVNINIVGDFHLNEEVAIILASFSASTSAFIDTIKSLDYKSFKTIVESCGNYKVTKGKPVKGAWNIGQQRSVLTPLCGFPSQAAGVIRSIFARTLDAANHSIPDLQRAAVTILDGISEQSLRLVDAMVYTSDLLTNSVIIMAY
VTGGLVQQTSQWLSNLLGTTVEKLRPIFEWIEAKLSAGVEFLKDAWEILKFLITGVFDIVKGQIQVASDNIKDCVKCFIDVVNKALEMCIDQVTIAGAKLRSLNLGEVFIAQSKGLYRQCIRGKEQLQLLMPLKAPKEVTFLEGDSHDTV
LTSEEVVLKNGELEALETPVDSFTNGAIVGTPVCVNGLMLLEIKDKEQYCALSPGLLATNNVFRLKGGAPIKGVTFGEDTVWEVQGYKNVRITFELDERVDKVLNEKCSVYTVESGTEVTEFACVVAEAVVKTLQPVSDLLTNMGIDLDE
WSVATFYLFDDAGEENFSSRMYCSFYPPDEEEEDDAECEEEEIDETCEHEYGTEDDYQGLPLEFGASAETVRVEEEEEEDWLDDTTEQSEIEPEPEPTPEEPVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANIHLKHGGGVA
GALNKATNGAMQKESDDYIKLNGPLTVGGSCLLSGHNLAKKCLHVVGPNLNAGEDIQLLKAAYENFNSQDILLAPLLSAGIFGAKPLQSLQVCVQTVRTQVYIAVNDKALYEQVVMDYLDNLKPRVEAPKQEEPPNTEDSKTEEKSVVQK
PVDVKPKIKACIDEVTTTLEETKFLTNKLLLFADINGKLYHDSQNMLRGEDMSFLEKDAPYMVGDVITSGDITCVVIPSKKAGGTTEMLSRALKKVPVDEYITTYPGQGCAGYTLEEAKTALKKCKSAFYVLPSEAPNAKEEILGTVSWN
LREMLAHAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSSSKTSEEHFVETVSLAGSYRDWSYSGQRTELG
VEFLKRGDKIVYHTLESPVEFHLDGEVLSLDKLKSLLSLREVKTIKVFTTVDNTNLHTQLVDMSMTYGQQFGPTYLDGADVTKIKPHVNHEGKTFFVLPSDDTLRSEAFEYYHTLDESFLGRYMSALNHTKKWKFPQVGGLTSIKWADNN
CYLSSVLLALQQLEVKFNAPALQEAYYRARAGDAANFCALILAYSNKTVGELGDVRETMTHLLQHANLESAKRVLNVVCKHCGQKTTTLTGVEAVMYMGTLSYDNLKTGVSIPCVCGRDATQYLVQQESSFVMMSAPPAEYKLQQGTFLC
ANEYTGNYQCGHYTHITAKETLYRIDGAHLTKMSEYKGPVTDVFYKETSYTTTIKPVSYKLDGVTYTEIEPKLDGYYKKDNAYYTEQPIDLVPTQPLPNASFDNFKLTCSNTKFADDLNQMTGFTKPASRELSVTFFPDLNGDVVAIDYR
HYSASFKKGAKLLHKPIVWHINQATTKTTFKPNTWCLRCLWSTKPVDTSNSFEVLAVEDTQGMDNLACESQQPTSEEVVENPTIQKEVIECDVKTTEVVGNVILKPSDEGVKVTQELGHEDLMAAYVENTSITIKKPNELSLALGLKTIA
THGIAAINSVPWSKILAYVKPFLGQAAITTSNCAKRLAQRVFNNYMPYVFTLLFQLCTFTKSTNSRIRASLPTTIAKNSVKSVAKLCLDAGINYVKSPKFSKLFTIAMWLLLLSICLGSLICVTAAFGVLLSNFGAPSYCNGVRELYLNS
SNVTTMDFCEGSFPCSICLSGLDSLDSYPALETIQVTISSYKLDLTILGLAAEWVLAYMLFTKFFYLLGLSAIMQVFFGYFASHFISNSWLMWFIISIVQMAPVSAMVRMYIFFASFYYIWKSYVHIMDGCTSSTCMMCYKRNRATRVEC
TTIVNGMKRSFYVYANGGRGFCKTHNWNCLNCDTFCTGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVAVKNGALHLYFDKAGQKTYERHPLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCDESASKSASVYYSQLMCQPILLLD
QALVSDVGDSTEVSVKMFDAYVDTFSATFSVPMEKLKALVATAHSELAKGVALDGVLSTFVSAARQGVVDTDVDTKDVIECLKLSHHSDLEVTGDSCNNFMLTYNKVENMTPRDLGACIDCNARHINAQVAKSHNVSLIWNVKDYMSLSE
QLRKQIRSAAKKNNIPFRLTCATTRQVVNVITTKISLKGGKIVSTCFKLMLKATLLCVLAALVCYIVMPVHTLSIHDGYTNEIIGYKAIQDGVTRDIISTDDCFANKHAGFDAWFSQRGGSYKNDKSCPVVAAIITREIGFIVPGLPGTV
LRAINGDFLHFLPRVFSAVGNICYTPSKLIEYSDFATSACVLAAECTIFKDAMGKPVPYCYDTNLLEGSISYSELRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDAEYCRHGTCERSEVGICLSTSGRWVLNNEHYRALSGVFCGVDA
MNLIANIFTPLVQPVGALDVSASVVAGGIIAILVTCAAYYFMKFRRVFGEYNHVVAANALLFLMSFTILCLVPAYSFLPGVYSVFYLYLTFYFTNDVSFLAHLQWFAMFSPIVPFWITAIYVFCISLKHCHWFFNNYLRKRVMFNGVTFS
TFEEAALCTFLLNKEMYLKLRSETLLPLTQYNRYLALYNKYKYFSGALDTTSYREAACCHLAKALNDFSNSGADVLYQPPQTSITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDTVYCPRHVICTAEDMLNPNYEDLLIR
KSNHSFLVQAGNVQLRVIGHSMQNCLLRLKVDTSNPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNHTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGKFYGPFVDRQTAQAAGTDTTITLNVLAWLYA
AVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCAALKELLQNGMNGRTILGSTILEDEFTPFDVVRQCSGVTFQGKFKKIVKGTHHWMLLTFLTSLLILVQSTQWSLFFFVYENAFLPFTLGIMAIAA
CAMLLVKHKHAFLCLFLLPSLATVAYFNMVYMPASWVMRIMTWLELADTSLSGYRLKDCVMYASALVLLILMTARTVYDDAARRVWTLMNVITLVYKVYYGNALDQAISMWALVISVTSNYSGVVTTIMFLARAIVFVCVEYYPLLFITG
NTLQCIMLVYCFLGYCCCCYFGLFCLLNRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKSSIDAFKLNIKLLGIGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQG
AVDINRLCEEMLDNRATLQAIASEFSSLPSYAAYATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVV
VPDYGTYKNTCDGNTFTYASALWEIQQVVDADSKIVQLSEINMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGP
KVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDPAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVGFTLRNTVCTVC
GMWKGYGCSCDQLREPLMQSADASTFLNGFAV
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P0C6U8(R1A_SARS)]

4382
region name description
1-4382 CHAIN /note="Replicase polyprotein 1a" /id="PRO_0000338254"
1-180 CHAIN /note="Host translation inhibitor nsp1" /id="PRO_0000338255"
181-818 CHAIN /note="Non-structural protein 2" /id="PRO_0000338256"
819-2740 CHAIN /note="Papain-like protease nsp3" /id="PRO_0000338257"
2741-3240 CHAIN /note="Non-structural protein 4" /id="PRO_0000338258"
3241-3546 CHAIN /note="3C-like proteinase nsp5" /id="PRO_0000338259"
3547-3836 CHAIN /note="Non-structural protein 6" /id="PRO_0000338260"
3837-3919 CHAIN /note="Non-structural protein 7" /id="PRO_0000338261"
3920-4117 CHAIN /note="Non-structural protein 8" /id="PRO_0000338262"
4118-4230 CHAIN /note="RNA-capping enzyme subunit nsp9" /id="PRO_0000338263"
4231-4369 CHAIN /note="Non-structural protein 10" /id="PRO_0000338264"
4370-4382 CHAIN /note="Non-structural protein 11" /id="PRO_0000338265"
1-2202 TOPO_DOM /note="Cytoplasmic"
2203-2223 TRANSMEM /note="Helical"
2224-2303 TOPO_DOM /note="Lumenal"
2304-2324 TRANSMEM /note="Helical"
2325-2754 TOPO_DOM /note="Cytoplasmic"
2755-2775 TRANSMEM /note="Helical"
2776-3021 TOPO_DOM /note="Lumenal"
3022-3042 TRANSMEM /note="Helical"
3043-3076 TOPO_DOM /note="Cytoplasmic"
3077-3097 TRANSMEM /note="Helical"
3098-3104 TOPO_DOM /note="Lumenal"
3105-3125 TRANSMEM /note="Helical"
3126-3563 TOPO_DOM /note="Cytoplasmic"
3564-3584 TRANSMEM /note="Helical"
3585-3585 TOPO_DOM /note="Lumenal"
3586-3606 TRANSMEM /note="Helical"
3607-3611 TOPO_DOM /note="Cytoplasmic"
3612-3632 TRANSMEM /note="Helical"
3633-3657 TOPO_DOM /note="Lumenal"
3658-3678 TRANSMEM /note="Helical"
3679-3727 TOPO_DOM /note="Cytoplasmic"
3728-3748 TRANSMEM /note="Helical"
3749-3755 TOPO_DOM /note="Lumenal"
3756-3776 TRANSMEM /note="Helical"
3777-4382 TOPO_DOM /note="Cytoplasmic"
12-127 DOMAIN /note="CoV Nsp1 globular"
148-179 DOMAIN /note="BetaCoV Nsp1 C-terminal"
183-456 DOMAIN /note="CoV Nsp2 N-terminal"
458-688 DOMAIN /note="CoV Nsp2 middle"
690-818 DOMAIN /note="CoV Nsp2 C-terminal"
822-930 DOMAIN /note="Ubiquitin-like 1"
1003-1169 DOMAIN /note="Macro 1"
1207-1335 DOMAIN /note="Macro 2"
1343-1470 DOMAIN /note="Macro 3"
1472-1538 DOMAIN /note="DPUP"
1542-1597 DOMAIN /note="Ubiquitin-like 2"
1611-1875 DOMAIN /note="Peptidase C16"
1888-1998 DOMAIN /note="Nucleic acid-binding"
2023-2132 DOMAIN /note="G2M"
2224-2294 DOMAIN /note="3Ecto"
2372-2740 DOMAIN /note="CoV Nsp3 Y"
3142-3240 DOMAIN /note="Nsp4C"
3241-3546 DOMAIN /note="Peptidase C30"
3837-3919 DOMAIN /note="RdRp Nsp7 cofactor"
3920-4117 DOMAIN /note="RdRp Nsp8 cofactor"
4118-4230 DOMAIN /note="Nsp9 ssRNA-binding"
4231-4369 DOMAIN /note="ExoN/MTase coactivator"
1729-1766 ZN_FING /note="C4-type" ECO:0000269|PubMed:16306590"
4304-4320 ZN_FING
4347-4360 ZN_FING
200-236 REGION /note="C2H2"
323-344 REGION /note="C4"
370-416 REGION /note="C2HC"
972-1003 REGION /note="Disordered"
1175-1198 REGION /note="Disordered"
2203-2324 REGION /note="HD1"
2372-2462 REGION /note="Y1"
2376-2389 REGION /note="ZF1"
2422-2432 REGION /note="ZF2"
2463-2740 REGION /note="CoV-Y"
2463-2557 REGION /note="Y2"
2558-2639 REGION /note="Y3"
2640-2740 REGION /note="Y4"
2755-3125 REGION /note="HD2"
3564-3776 REGION /note="HD3"
972-997 COMPBIAS /note="Acidic residues"
1651-1651 ACT_SITE /note="For PL-PRO activity"
1812-1812 ACT_SITE /note="For PL-PRO activity" ECO:0000269|PubMed:16306590"
1826-1826 ACT_SITE /note="For PL-PRO activity" ECO:0000269|PubMed:16306590"
3281-3281 ACT_SITE /note="For 3CL-PRO activity" ECO:0000269|PubMed:16306590"
3385-3385 ACT_SITE /note="For 3CL-PRO activity"
200-200 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="1"
231-231 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="1"
234-234 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="1"
236-236 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="1"
323-323 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="2"
326-326 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="2"
341-341 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="2"
344-344 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="2"
370-370 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="3"
373-373 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="3"
382-382 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="3"
416-416 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="3"
1729-1729 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="4"
1732-1732 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="4"
1764-1764 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="4"
1766-1766 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="4"
2376-2376 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="5"
2381-2381 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="5"
2386-2386 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="5"
2389-2389 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="5"
2422-2422 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="6"
2425-2425 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="6"
2429-2429 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="6"
2432-2432 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="6"
4304-4304 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="7"
4307-4307 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="7"
4313-4313 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="7"
4320-4320 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="7"
4347-4347 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="8"
4350-4350 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="8"
4358-4358 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="8"
4360-4360 BINDING /ligand="Zn(2+)" /ligand_id="ChEBI:CHEBI:29105" /ligand_label="8"
1-4382 DISORDER predicted by DISOPRED

MONOMER
4382
pdb_id a1 identity[%]2 description
7fac A 100.0 R1A_SARS Non-structural protein 2
7msx A 71.8 R1AB_SARS2 Non-structural protein 2
4m0w A 99.7 R1A_CVHSA Replicase polyprotein 1a
5b6o A 99.7 R1AB_CVHSA 3C-like proteinase
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
4382 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1uk4[2] C 5-mer peptide of inhibitor[6 aa] A 100.0
/100.0
18
/18
R1AB_SARS 3C-like proteinase nsp5
1uk4[1] E 5-mer peptide of inhibitor[5 aa] B 100.0
/100.0
2
/2
R1AB_SARS 3C-like proteinase nsp5
2z3c[4] B inhibitor[5 aa] A 100.0
/100.0
19
/19
R1AB_CVHSA Replicase polyprotein 1ab (pp1ab)
2z3d[2] B Inhibitor[5 aa] A 100.0
/100.0
18
/18
R1AB_CVHSA Replicase polyprotein 1ab (pp1ab)
3sna[2] B Peptide aldehyde inhibitor Ac-NSFSQ-H[6 aa] A 100.0
/100.0
17
/17
R1A_CVHSA 3C-like proteinase
3snb[2] B Peptide aldehyde inhibitor Ac-DSFDQ-H[6 aa] A 100.0
/100.0
19
/19
R1A_CVHSA 3C-like proteinase
3snc[2] B Peptide aldehyde inhibitor Ac-NSTSQ-H[6 aa] A 100.0
/100.0
18
/18
R1A_CVHSA 3C-like proteinase
3snd[2] C Peptide aldehyde inhibitor Ac-ESTLQ-H[2 aa] A 100.0
/100.0
12
/12
R1A_CVHSA 3C-like proteinase
3sne[2] B Peptide aldehyde inhibitor Ac-ESTLQ-H[6 aa] A 100.0
/100.0
21
/21
R1A_CVHSA 3C-like proteinase
3vb4[4] C B4Z inhibitor[5 aa] A 100.0
/100.0
21
/21
R1A_CVHSA 3C-like proteinase
3vb4[1] C B4Z inhibitor[5 aa] B 100.0
/100.0
1
/1
R1A_CVHSA 3C-like proteinase
3vb6[2] C C6Z inhibitor[4 aa] A 100.0
/100.0
18
/18
R1A_CVHSA 3C-like proteinase
3vb6[1] D C6Z inhibitor[4 aa] A 100.0
/100.0
1
/1
R1A_CVHSA 3C-like proteinase
3vb7[2] C M4Z inhibitor[4 aa] A 100.0
/100.0
20
/20
R1A_CVHSA 3C-like proteinase
3vb7[1] C M4Z inhibitor[4 aa] B 100.0
/100.0
1
/1
R1A_CVHSA 3C-like proteinase
4m0w[4] B RS27A_BOVIN Ubiquitin[76 aa] A 96.2
/99.7
26
/26
R1A_CVHSA Replicase polyprotein 1a
5e6j[2] C UBB_HUMAN Polyubiquitin-B[75 aa] A 100.0
/99.1
11
/11
R1AB_CVHSA Replicase polyprotein 1ab
5tl6[2] D ISG15_HUMAN Ubiquitin-like protein ISG15[78 aa] A 100.0
/100.0
21
/21
R1AB_CVHSA Replicase polyprotein 1ab
5tl7[2] A ISG15_MOUSE Ubiquitin-like protein ISG15[77 aa] B 100.0
/100.0
27
/27
R1AB_CVHSA Replicase polyprotein 1ab
7lfu[3] B Papain-like protease peptide inhibitor VIR250[5 aa.. A 100.0
/100.0
16
/16
R1A_SARS papain-like protease
3aw0[2] B peptide ACE-SER-ALA-VAL-LEU-HIS-H[6 aa] A 100.0
/99.7
18
/18
R1A_CVHSA 3C-Like Proteinase
2q6g[1] C Polypeptide chain[11 aa] A 100.0
/99.7
24
/24
R1AB_CVHSA severe acute respiratory syndrome coronavirus (SAR..
2q6g[1] D Polypeptide chain[8 aa] B 96.0
/99.7
25
/25
R1AB_CVHSA severe acute respiratory syndrome coronavirus (SAR..
3atw[2] C peptide ACE-THR-VAL-ALC-HIS-H[5 aa] A 95.2
/99.7
21
/21
R1A_CVHSA 3C-Like Proteinase
3avz[1] B peptide ACE-SER-ALA-VAL-ALC-HIS-H[6 aa] A 94.7
/99.7
19
/19
R1A_CVHSA 3C-Like Proteinase
2amq[2] C N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-.. A 100.0
/100.0
24
/24
R1AB_CVHSA 3C-like proteinase
2hob[12] B N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-.. A 100.0
/100.0
23
/23
R1AB_CVHSA Replicase polyprotein 1ab
3iwm[6] H N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]ALANYL-L-VALYL-.. C 100.0
/100.0
1
/1
R1A_CVHSA 3C-like proteinase
6xbi[1] C inhibitor UAW248[5 aa] A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
6xch[4] B Leupeptin[4 aa] A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
8gvd[3] B 3-PYRIDIN-4-YL-2,4-DIHYDRO-INDENO[1,2-.C.]PYRAZOLE.. A 91.7
/96.1
12
/12
R1A_SARS2 3C-like proteinase nsp5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
4382 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1wof[2] C I12
N-[(5-METHYLISOXAZOL-3-YL)CARBONYL]-L-ALANYL-L-VAL..
A 100.0
/100.0
23
/23
R1AB_CVHSA 3C-like proteinase
2a5i[6] B AZP
(5S,8S,14R)-ETHYL 11-(3-AMINO-3-OXOPROPYL)-8-BENZY..
A 100.0
/100.0
23
/23
R1AB_CVHSA 3C-like peptidase
2alv[2] B CY6
N-((3S,6R)-6-((S,E)-4-ETHOXYCARBONYL-1-((S)-2-OXOP..
A 100.0
/100.0
24
/24
R1AB_CVHSA Replicase polyprotein 1ab
2amd[2] C 9IN
N-(3-FUROYL)-D-VALYL-L-VALYL-N~1~-((1R,2Z)-4-ETHOX..
A 100.0
/100.0
23
/23
R1AB_CVHSA 3C-like proteinase
2d2d[2] C ENB
ETHYL (2E,4S)-4-[((2R)-2-{[N-(TERT-BUTOXYCARBONYL)..
A 100.0
/100.0
21
/21
R1AB_CVHSA 3C-like proteinase
2gx4[2] B NOL
N-[(BENZYLOXY)CARBONYL]-O-(TERT-BUTYL)-L-THREONYL-..
A 100.0
/100.0
22
/22
R1AB_CVHSA 3C-like proteinase
2gx4[2] B NOL
N-[(BENZYLOXY)CARBONYL]-O-(TERT-BUTYL)-L-THREONYL-..
A 100.0
/100.0
1
/1
R1AB_CVHSA 3C-like proteinase
2gz7[2] B D3F
2-[(2,4-DICHLORO-5-METHYLPHENYL)SULFONYL]-1,3-DINI..
A 100.0
/100.0
13
/13
R1AB_CVHSA Replicase polyprotein 1ab
2gz8[2] B F3F
S-[5-(TRIFLUOROMETHYL)-4H-1,2,4-TRIAZOL-3-YL] 5-(P..
A 100.0
/100.0
14
/14
R1AB_CVHSA Replicase polyprotein 1ab
2op9[2] C WR1
NALPHA-[(BENZYLOXY)CARBONYL]-N-[(1R)-4-HYDROXY-1-M..
A 100.0
/100.0
13
/13
R1AB_CVHSA Replicase polyprotein 1ab (pp1ab, ORF1AB) 3C-like ..
2v6n[2] B XP1
4-(DIMETHYLAMINO)BENZOIC ACID[11 atoms]
A 100.0
/100.0
10
/10
R1AB_CVHSA REPLICASE POLYPROTEIN 1AB
2vj1[1] G XP1
4-(DIMETHYLAMINO)BENZOIC ACID[8 atoms]
B 100.0
/100.0
6
/6
A7J8L3_CVHSA SARS CORONAVIRUS MAIN PROTEINASE
2vj1[1] D BEZ
BENZOIC ACID[9 atoms]
A 100.0
/100.0
8
/8
A7J8L3_CVHSA SARS CORONAVIRUS MAIN PROTEINASE
2z94[2] C TLD
4-methylbenzene-1,2-dithiol[9 atoms]
A 100.0
/100.0
3
/3
R1AB_CVHSA Replicase polyprotein 1ab
2zu4[2] B ZU3
N-[(benzyloxy)carbonyl]-3-[(2,2-dimethylpropanoyl)..
A 100.0
/100.0
22
/22
R1A_CVHSA 3C-like proteinase
2zu4[2] B ZU3
N-[(benzyloxy)carbonyl]-3-[(2,2-dimethylpropanoyl)..
A 100.0
/100.0
1
/1
R1A_CVHSA 3C-like proteinase
2zu5[2] B ZU5
N-[(benzyloxy)carbonyl]-O-tert-butyl-L-threonyl-N-..
A 100.0
/100.0
22
/22
R1A_CVHSA 3C-like proteinase
2zu5[2] B ZU5
N-[(benzyloxy)carbonyl]-O-tert-butyl-L-threonyl-N-..
A 100.0
/100.0
1
/1
R1A_CVHSA 3C-like proteinase
3d62[2] B 959
benzyl (2-oxopropyl)carbamate[15 atoms]
A 100.0
/100.0
10
/10
R1AB_CVHSA 3C-like proteinase
3mj5[1] C GRM
N-(1,3-benzodioxol-5-ylmethyl)-1-[(1R)-1-naphthale..
A 100.0
/100.0
9
/9
R1A_CVHSA Replicase polyprotein 1a
3mj5[1] E GRM
N-(1,3-benzodioxol-5-ylmethyl)-1-[(1R)-1-naphthale..
A 100.0
/100.0
4
/4
R1A_CVHSA Replicase polyprotein 1a
3sn8[2] B S89
N-[(2S)-1-hydroxy-3-phenylpropan-2-yl]-Nalpha-[(2E..
A 100.0
/100.0
15
/15
R1A_CVHSA 3C-like proteinase
3szn[2] B G75
ETHYL (4R)-4-({N-[(BENZYLOXY)CARBONYL]-L-PHENYLALA..
A 100.0
/100.0
17
/17
R1A_CVHSA 3C-like proteinase
3tit[2] B G81
ETHYL (4R)-4-{[N-(TERT-BUTOXYCARBONYL)-L-PHENYLALA..
A 100.0
/100.0
15
/15
R1A_CVHSA SARS coronavirus main protease
3tiu[2] C G82
ETHYL (5S,8S,11R)-8-BENZYL-5-(3-TERT-BUTOXY-3-OXOP..
A 100.0
/100.0
23
/23
R1A_CVHSA SARS coronavirus main protease
3tns[2] B G83
ETHYL (5S,8S,11R)-8-BENZYL-5-(2-TERT-BUTOXY-2-OXOE..
A 100.0
/100.0
24
/24
R1A_CVHSA SARS coronavirus main protease
3tns[2] B G83
ETHYL (5S,8S,11R)-8-BENZYL-5-(2-TERT-BUTOXY-2-OXOE..
A 100.0
/100.0
1
/1
R1A_CVHSA SARS coronavirus main protease
3tnt[2] B G85
N-[(benzyloxy)carbonyl]-O-tert-butyl-L-seryl-N-{(2..
A 100.0
/100.0
22
/22
R1A_CVHSA SARS coronavirus main protease
3v3m[2] B 0EN
N-[(1R)-2-(tert-butylamino)-2-oxo-1-(pyridin-3-yl)..
A 100.0
/100.0
15
/15
R1A_CVHSA 3C-like proteinase
4mds[2] B 23H
N-[4-(acetylamino)phenyl]-2-(1H-benzotriazol-1-yl)..
A 100.0
/100.0
18
/18
R1A_CVHSA 3C-like proteinase
4ovz[1] D P85
N-[(4-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-..
A 100.0
/100.0
11
/11
R1A_CVHSA Papain-like proteinase
4ow0[1] D S88
N-[(3-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-..
A 100.0
/100.0
10
/10
R1A_CVHSA papain-like protease
5n19[2] B D03
(S)-N-benzyl-3-((S)-2-cinnamamido-3-phenylpropanam..
A 100.0
/100.0
21
/21
R1AB_CVHSA SARS coronavirus main protease
5n5o[2] B 8O5
(2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})..
A 100.0
/100.0
17
/17
R1AB_CVHSA Replicase polyprotein 1ab
6lnq[1] B EJF
N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene..
A 100.0
/100.0
19
/19
Severe Acute Respiratory Syndrome Coronavirus 3c L..
6lny[1] B EOC
(2~{S})-4-methyl-~{N}-[(2~{S})-1-oxidanylidene-3-[..
A 100.0
/100.0
16
/16
R1A_CVHSA Replicase polyprotein 1a
6lo0[1] B EOF
(2~{S})-4-methyl-~{N}-[(2~{S})-1-oxidanylidene-3-[..
A 100.0
/100.0
18
/18
R1A_CVHSA Replicase polyprotein 1a
6m2n[4] E 3WL
5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one[20 atom..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
6wco[2] D X47
N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclopentylamino..
A 100.0
/100.0
17
/17
A0A3G5BIY8_CVHSA Main protease
6wtk[6] B UED
N~2~-[(benzyloxy)carbonyl]-N-{(2S)-1-hydroxy-3-[(3..
A 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase
6xhn[2] C V3D
(3S)-3-{[N-(4-methoxy-1H-indole-2-carbonyl)-L-leuc..
A 100.0
/100.0
17
/17
R1A_CVHSA 3C-like proteinase
6xho[1] D V34
ethyl (2E,4S)-4-{[N-(4-methoxy-1H-indole-2-carbony..
A 100.0
/100.0
19
/19
R1A_CVHSA 3C-like proteinase
6y7m[2] B OEW
~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclohexyl-1-[[(2..
A 100.0
/100.0
20
/20
R1A_SARS 3C-like proteinase
7en8[3] C J7R
~{N}-[(1~{S},2~{R})-2-[[4-bromanyl-2-(methylcarbam..
A 100.0
/96.1
17
/17
R1A_SARS2 3C-like proteinase
7en8[3] D J7R
~{N}-[(1~{S},2~{R})-2-[[4-bromanyl-2-(methylcarbam..
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
7eo8[1] C FNO
2-[(1R)-4-methyl-1-oxidanyl-pent-3-enyl]-5,8-bis(o..
A 100.0
/100.0
8
/8
R1A_CVHSA 3C-like proteinase
7k0h[2] E VR4
N-{(2S,3R)-4-(benzylamino)-3-hydroxy-4-oxo-1-[(3S)..
A 100.0
/100.0
18
/18
R1A_CVHSA Replicase polyprotein 1a
7lmg[2] C Y6G
2-(benzotriazol-1-yl)-~{N}-[4-(1~{H}-imidazol-4-yl..
A 100.0
/100.0
17
/17
R1A_SARS 3C-like proteinase
7lmh[2] B Y6D
2-(benzotriazol-1-yl)-~{N}-(4-pyridin-3-ylphenyl)-..
A 100.0
/100.0
19
/19
R1A_SARS 3C-like proteinase
7lmi[2] C Y6A
2-(benzotriazol-1-yl)-~{N}-[4-(1~{H}-pyrazol-4-yl)..
A 100.0
/100.0
16
/16
R1A_SARS 3C-like proteinase
7lmj[2] E Y67
2-(benzotriazol-1-yl)-~{N}-[(3-chlorophenyl)methyl..
A 100.0
/100.0
18
/18
R1A_SARS 3C-like proteinase
7rc1[2] B 4IO
5-chloropyridin-3-yl 1-(3-nitrobenzene-1-sulfonyl)..
A 100.0
/100.0
14
/14
R1A_SARS 3C-like proteinase
7wqi[2] C 80I
[(3~{S})-3-[[(2~{S})-2-[(4-methoxy-1~{H}-indol-2-y..
A 100.0
/100.0
14
/14
R1A_SARS 3C-like proteinase
7ygq[2] C HUR
N-[(2S)-1-[[(2S)-1-(1,3-benzothiazol-2-yl)-1-oxida..
A 100.0
/100.0
20
/20
R1A_SARS 3C-like proteinase nsp5
7zqw[2] B XNV
ethyl (4R)-4-({(2S)-2-[3-{[(5-methyl-1,2-oxazol-3-..
A 100.0
/100.0
19
/19
R1A_SARS 3C-like proteinase nsp5
8dz0[1] E 7YY
6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1..
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8dz0[3] G 7YY
6-[(6-chloranyl-2-methyl-indazol-5-yl)amino]-3-[(1..
B 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase nsp5
8uld[2] B WYR
N-[(benzyloxy)carbonyl]-4-fluoro-L-phenylalanyl-N-..
A 100.0
/100.0
19
/19
R1A_SARS Replicase polyprotein 1a
4m0w[1] E NHE
2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID[13 atoms..
A 100.0
/99.7
7
/7
R1A_CVHSA Replicase polyprotein 1a
4m0w[1] F NHE
2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID[13 atoms..
A 100.0
/99.7
6
/6
R1A_CVHSA Replicase polyprotein 1a
4tww[2] C 3A7
(2S)-2-({[(3S,4aR,8aS)-2-(4-bromobenzoyl)decahydro..
A 93.3
/99.7
15
/15
R1AB_CVHSA 3C-like proteinase
4twy[2] B 3BL
(2S)-2-({[(3S,4aR,8aS)-2-(biphenyl-4-ylcarbonyl)de..
A 94.4
/99.7
18
/18
R1AB_CVHSA 3C-like proteinase
4wy3[1] B 3X5
(2S)-2-({[(3R,4aS,8aR)-2-(biphenyl-4-ylcarbonyl)de..
A 93.8
/99.7
16
/16
R1AB_CVHSA 3C-like proteinase
5c5n[2] B SLH
(2S)-3-(1H-imidazol-5-yl)-2-({[(3R,4aS,8aR)-2-(N-p..
A 93.3
/99.7
15
/15
R1AB_CVHSA 3C-like proteinase
6w2a[1] E QYS
(1S,2S)-2-[(N-{[(4,4-difluorocyclohexyl)methoxy]ca..
B 100.0
/99.7
18
/18
R1A_CVHSA Replicase polyprotein 1a
6w2a[1] C VDJ
[4,4-bis(fluoranyl)cyclohexyl]methyl ~{N}-[(2~{S})..
A 100.0
/99.7
16
/16
R1A_CVHSA Replicase polyprotein 1a
2qiq[2] B CYV
ETHYL (4R)-4-{[(2R,5S)-5-{[N-(TERT-BUTOXYCARBONYL)..
A 100.0
/99.7
23
/23
R1AB_CVHSA Replicase polyprotein 1ab
5c5o[2] C SDJ
(2S)-3-(1H-imidazol-5-yl)-2-({[(3S,4aR,8aS)-2-(N-p..
A 94.1
/99.7
17
/17
R1AB_CVHSA 3C-like proteinase
7skr[2] B 9OZ
N-[(2-methoxypyridin-4-yl)methyl]-2-[(1R)-1-(napht..
A 100.0
/97.8
10
/10
Q0QDZ2_SARS 3C-like proteinase
3e9s[1] B TTT
5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]be..
A 100.0
/100.0
10
/10
R1A_CVHSA Non-structural protein 3
7skq[1] E TTT
5-amino-2-methyl-N-[(1R)-1-naphthalen-1-ylethyl]be..
A 100.0
/97.8
10
/10
Q0QDZ2_SARS 3C-like proteinase
7mpb[1] E ASC
ASCORBIC ACID[12 atoms]
B 100.0
/96.1
10
/10
R1AB_SARS2 3C-like proteinase
6w79[3] C X77
N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)..
A 100.0
/100.0
17
/17
Main protease
6wnp[6] B U5G
boceprevir (bound form)[37 atoms]
A 100.0
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
6wtj[5] B K36
(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
6wtj[2] B K36
(1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
6xb2[2] B NEN
1-ETHYL-PYRROLIDINE-2,5-DIONE[9 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
6xb2[2] C NEN
1-ETHYL-PYRROLIDINE-2,5-DIONE[9 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
6xqs[4] B SV6
(1S,3aR,6aS)-2-[(2S)-2-({(2S)-2-cyclohexyl-2-[(pyr..
A 100.0
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
6xqt[4] C NNA
(1R,2S,5S)-3-[N-({1-[(tert-butylsulfonyl)methyl]cy..
A 100.0
/96.1
25
/25
R1AB_SARS2 3C-like proteinase
6ynq[2] B P6N
(2~{S})-2-methyl-3,4-dihydro-2~{H}-naphthalen-1-on..
A 100.0
/96.1
8
/8
R1AB_SARS2 3C-like proteinase
6ynq[2] B P6N
(2~{S})-2-methyl-3,4-dihydro-2~{H}-naphthalen-1-on..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
6yvf[2] B A82
2-[[(1R)-1-(7-methyl-2-morpholin-4-yl-4-oxidanylid..
A 85.7
/96.1
7
/7
R1AB_SARS2 3C-like proteinase
6z2e[2] B Q5T
(4~{S})-4-[[(2~{S})-2-[[(2~{S})-2-[[(2~{S})-2-[3-[..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase
7abu[2] B R6Q
1'-[2-[4-(trifluoromethyl)phenyl]ethyl]spiro[1~{H}..
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7abu[2] B R6Q
1'-[2-[4-(trifluoromethyl)phenyl]ethyl]spiro[1~{H}..
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7ak4[2] B CB1
5-(AZIRIDIN-1-YL)-2,4-DINITROBENZAMIDE[18 atoms]
A 100.0
/96.1
11
/11
R1AB_SARS2 3C-like proteinase
7ans[2] F RNW
2-[(diphenylmethyl)-oxidanyl-$l^{3}-sulfanyl]-~{N}..
A 92.3
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7aph[2] B RT2
Tofogliflozin[28 atoms]
A 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase
7aqe[2] E RV5
N-1,2,3-Benzothiadiazol-6-yl-N'-[2-oxo-2-(1-piperi..
A 90.9
/96.1
11
/11
R1AB_SARS2 3C-like proteinase
7avd[1] D S1W
3-[[5-[3-(dimethylamino)phenoxy]pyrimidin-2-yl]ami..
B 88.9
/96.1
9
/9
R1AB_SARS2 3C-like proteinase
7aww[2] B CLU
2,6-DICHLORO-N-IMIDAZOLIDIN-2-YLIDENEANILINE[14 at..
A 80.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase
7ax6[2] B S8H
(2~{S})-2-azanyl-5-oxidanylidene-5-[[(2~{S})-1-oxi..
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7axm[2] C 93J
(2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-3-cyano..
A 100.0
/96.1
8
/8
R1AB_SARS2 3C-like proteinase
7axm[2] C 93J
(2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-3-cyano..
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7axo[2] G QCP
AR-42[23 atoms]
A 88.9
/96.1
9
/9
R1AB_SARS2 3C-like proteinase
7ay7[2] B S8T
9-fluoranyl-3-propan-2-yl-5,6-dihydrobenzo[b][1]be..
A 92.9
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7ay7[2] B S8T
9-fluoranyl-3-propan-2-yl-5,6-dihydrobenzo[b][1]be..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7buy[2] B JRY
hexylcarbamic acid[9 atoms]
A 100.0
/96.1
8
/8
R1AB_SARS2 3C-like proteinase
7cuu[3] D ALD
N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S)-1-hydroxy..
A 100.0
/96.1
19
/19
R1AB_SARS2 3C protein
7dgh[2] B H6F
~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxid..
A 100.0
/96.1
23
/23
R1A_SARS2 3C-like proteinase
7dgh[2] B H6F
~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxid..
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
7dgi[2] C H6L
~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxid..
A 100.0
/96.1
20
/20
R1A_SARS2 3C-like proteinase
7dgi[1] D H6L
~{N}-[(2~{S})-3-methyl-1-[[(2~{S})-4-methyl-1-oxid..
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
7dpu[1] D HER
7-methoxy-3,5-bis(oxidanyl)-2-[3,4,5-tris(oxidanyl..
B 100.0
/96.1
16
/16
R1A_SARS2 3C-like proteinase
7en9[2] B J7O
5-bromanyl-~{N}-methyl-3-nitro-2-[(4~{R},5~{S})-2-..
A 100.0
/96.1
17
/17
R1A_SARS2 3C-like proteinase
7gav[1] I KFU
(3S)-5-chloro-N-(isoquinolin-4-yl)-2,3-dihydro-1-b..
A 100.0
/96.1
12
/12
R1AB_SARS2 3C-like proteinase
7ghm[1] N Q99
N-[2-(3-chloro-5-{[(2S)-4-oxoazetidin-2-yl]oxy}phe..
B 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7ghp[1] M OYF
(4R)-6-chloro-N-(2,7-naphthyridin-4-yl)-3,4-dihydr..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7ghq[2] E OYX
N-(2-cyclohexylethyl)-2-(isoquinolin-4-yl)-N-[(thi..
A 94.1
/96.1
17
/17
R1AB_SARS2 3C-like proteinase
7ghz[1] E PJX
(4R)-6-chloro-N-(isoquinolin-4-yl)-1-methyl-1,2,3,..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gi6[1] D QD4
(4R)-6-chloro-N~4~-(isoquinolin-4-yl)-3,4-dihydroq..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gi7[1] E QD9
N-[(3-chlorophenyl)methyl]-N-[5-(dimethylamino)pyr..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7gij[1] F QGO
(4S)-6-chloro-4-[2-(dimethylamino)-2-oxoethyl]-N-(..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gij[1] G QGO
(4S)-6-chloro-4-[2-(dimethylamino)-2-oxoethyl]-N-(..
A 92.3
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gjd[1] F QM9
(4S)-4-amino-6-chloro-N-(isoquinolin-4-yl)-3,4-dih..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gjf[1] F QMX
(4R)-6-chloro-N-(isoquinolin-4-yl)-4-({[(1-methyl-..
A 94.1
/96.1
17
/17
R1AB_SARS2 3C-like proteinase
7gjj[1] E QOO
2-{3-chloro-5-[4-(ethanesulfonyl)piperazin-1-yl]ph..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7gl8[1] I KG9
(4S)-6-chloro-2-[(1-cyanocyclopropyl)methanesulfon..
A 100.0
/96.1
15
/15
R1AB_SARS2 3C-like proteinase
7gnj[2] I RZU
1-[(3'S)-6-chloro-1'-(isoquinolin-4-yl)-1,2'-dioxo..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gnk[1] I S0X
2-[(3'S)-6-chloro-1'-(isoquinolin-4-yl)-2'-oxo-1H-..
A 100.0
/96.1
15
/15
R1AB_SARS2 3C-like proteinase
7gnl[2] I S1U
(4S)-6-chloro-2-{2-[4-(4-ethylpiperazin-1-yl)anili..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7gnl[2] N S1U
(4S)-6-chloro-2-{2-[4-(4-ethylpiperazin-1-yl)anili..
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7gno[1] H S3X
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-(2-{[(1S)-1-(..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gno[1] P S3X
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-(2-{[(1S)-1-(..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7gnp[1] H S4X
(4S)-6-chloro-2-(2-{[(1r,3R,5R,7S)-3-hydroxyadaman..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gnq[1] G S5L
(4S)-2-[2-(4-acetamidoanilino)-2-oxoethyl]-6-chlor..
A 100.0
/96.1
15
/15
R1AB_SARS2 3C-like proteinase
7gnq[1] T S5L
(4S)-2-[2-(4-acetamidoanilino)-2-oxoethyl]-6-chlor..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7gns[1] H S6K
1-{[(3'S,4'R)-6-chloro-1'-(isoquinolin-4-yl)-4'-me..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7gnt[1] J S7C
1-{[(3'S,4'R)-6-chloro-4'-ethyl-1'-(isoquinolin-4-..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7gnu[1] I S7U
1-{[(3'S)-6-chloro-1'-(isoquinolin-4-yl)-2'-oxo-1H..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7gre[1] C XWH
4-[3-(trifluoromethyl)-1H-pyrazol-5-yl]pyridine[15..
A 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase nsp5
7grh[1] K Y25
5-chloropyridin-3-ol[8 atoms]
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
7grh[1] W Y25
5-chloropyridin-3-ol[8 atoms]
B 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase nsp5
7gro[1] C Y3N
N-[4-cyano-2-(trifluoromethyl)phenyl]acetamide[16 ..
A 100.0
/96.1
6
/6
R1AB_SARS2 3C-like proteinase nsp5
7grs[1] Q NT9
~{N}-methyl-1-(4-thiophen-2-ylphenyl)methanamine[1..
B 100.0
/96.1
10
/10
R1AB_SARS2 3C-like proteinase nsp5
7grs[1] R NT9
~{N}-methyl-1-(4-thiophen-2-ylphenyl)methanamine[1..
B 100.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase nsp5
7gru[1] J Y0H
3-(4-chlorophenyl)-1-methyl-1H-pyrazol-5-amine[14 ..
B 85.7
/96.1
7
/7
R1AB_SARS2 3C-like proteinase nsp5
7grx[1] N XZT
1-(2,4-difluorophenyl)pyrrolidine-2,5-dione[15 ato..
B 100.0
/96.1
8
/8
R1AB_SARS2 3C-like proteinase nsp5
7gry[1] N XZO
1-(3,5-dichlorophenyl)pyrrolidine-2,5-dione[15 ato..
B 100.0
/96.1
9
/9
R1AB_SARS2 3C-like proteinase nsp5
7jt7[4] B TG3
ethyl (4R)-4-[[(2S)-4-methyl-2-[[(2S,3R)-3-[(2-met..
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7jw8[2] F BTB
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PR..
A 100.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase
7l11[1] C XF1
2-[3-(3-chloro-5-propoxyphenyl)-2-oxo[2H-[1,3'-bip..
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7l14[1] C XFD
2-{3-[3-chloro-5-(cyclopropylmethoxy)phenyl]-2-oxo..
A 100.0
/96.1
22
/22
R1AB_SARS2 3C-like proteinase
7lco[2] B XTJ
(3-fluorophenyl)methyl [(2S)-3-cyclopropyl-1-oxo-1..
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7lco[2] B XTJ
(3-fluorophenyl)methyl [(2S)-3-cyclopropyl-1-oxo-1..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7lcr[2] C XTM
N~2~-{[(3-fluorophenyl)methoxy]carbonyl}-N-{(2S)-1..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7lcr[1] D XTM
N~2~-{[(3-fluorophenyl)methoxy]carbonyl}-N-{(2S)-1..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7lcs[2] B XTP
benzyl [(2S)-3-cyclopropyl-1-({(2S)-1-hydroxy-3-[(..
A 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase
7lcs[2] B XTP
benzyl [(2S)-3-cyclopropyl-1-({(2S)-1-hydroxy-3-[(..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7lct[2] B XU4
N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]pro..
A 100.0
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
7ldl[2] C XV4
N-[(2S)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7ltj[4] B YD1
6-[4-(3,4-dichlorophenyl)piperazin-1-yl]carbonyl-1..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7n8c[2] B YD1
6-[4-(3,4-dichlorophenyl)piperazin-1-yl]carbonyl-1..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7ltn[2] B YCV
2-[4-(1~{H}-indazol-4-yl)-2-methanoyl-6-methoxy-ph..
A 92.3
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7ltn[2] B YCV
2-[4-(1~{H}-indazol-4-yl)-2-methanoyl-6-methoxy-ph..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7mbi[2] F YWJ
4-methoxy-N-[(2S)-4-methyl-1-oxo-1-({(2S)-3-oxo-1-..
B 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7mbi[2] H YWJ
4-methoxy-N-[(2S)-4-methyl-1-oxo-1-({(2S)-3-oxo-1-..
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7mbi[1] G FN7
2,4,6-trimethylpyridine-3-carboxylic acid[12 atoms..
B 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7mng[2] B ZL7
(2R,3S)-N-cyclopropyl-3-{[(2R)-3-(cyclopropylmetha..
A 93.8
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7q5e[1] C 90I
benzyl (S)-2-(((S)-3,4-dioxo-1-((S)-2-oxopyrrolidi..
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7q5f[1] C 90X
(S)-1-(2-(2,4-dichlorophenoxy)acetyl)-N-((S)-3,4-d..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7r7h[2] C 4IT
N-[(2S)-1-({(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidi..
A 100.0
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
7rfr[1] D 4W8
(1R,2S,5S)-N-{(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-..
B 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7rls[2] B 5YN
6-[4-(3,4,5-trichlorophenyl)piperazine-1-carbonyl]..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7rm2[2] B 5YJ
6-[4-(3,5-dichloro-4-methylphenyl)piperazine-1-car..
A 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase
7rmb[2] B 5Z7
6-[4-(4-bromo-3-chlorophenyl)piperazine-1-carbonyl..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7rme[2] B 5Z3
6-{4-[4-chloro-3-(trifluoromethyl)phenyl]piperazin..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7rmt[2] B 5ZN
2-chloro-4-[4-(2,6-dioxo-1,2,5,6-tetrahydropyrimid..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7rmz[2] B 5ZJ
6-{4-[3-chloro-4-(trifluoromethyl)phenyl]piperazin..
A 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase
7rn4[2] B H69
6-[4-(3,4-dichlorophenyl)piperidine-1-carbonyl]pyr..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7rnh[2] B 5ZW
6-[4-(4-chlorophenyl)piperazine-1-carbonyl]pyrimid..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7rnk[2] B 5ZT
6-{4-[3-chloro-4-(hydroxymethyl)phenyl]piperazine-..
A 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase
7s3k[2] B Z26
2-(5-chloro-2-methoxyphenyl)-N-(isoquinolin-4-yl)a..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7s3k[2] B Z26
2-(5-chloro-2-methoxyphenyl)-N-(isoquinolin-4-yl)a..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7s3s[2] B 860
2-(3-chlorophenyl)-N-(isoquinolin-4-yl)acetamide[2..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7s3s[2] B 860
2-(3-chlorophenyl)-N-(isoquinolin-4-yl)acetamide[2..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7s4b[2] B 87H
(2R)-2-(3-fluorophenyl)-N-(isoquinolin-4-yl)propan..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7s4b[2] B 87H
(2R)-2-(3-fluorophenyl)-N-(isoquinolin-4-yl)propan..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7set[2] B I70
(1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase
7sf1[2] B 8ZI
(1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase
7sfh[2] B 91I
(1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(..
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7sfi[2] B 91Z
(1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(..
A 100.0
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
7sgh[1] F 99W
(S)-N-((S)-1-imino-3-((S)-2-oxopyrrolidin-3-yl)pro..
B 100.0
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
7tdu[2] B I1W
(1R,2S,5S)-N-{(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-..
A 100.0
/96.1
24
/24
R1AB_SARS2 3C-like proteinase
7tdu[2] B I1W
(1R,2S,5S)-N-{(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7teh[2] B I1Z
(1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-v..
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7tfr[2] B NB2
(1R,2S,5S)-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrroli..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7tuu[2] B U88
5-nitro-1,3-thiazole[8 atoms]
A 100.0
/96.1
5
/5
R1A_SARS2 3C-like proteinase nsp5
7tuu[2] C U88
5-nitro-1,3-thiazole[8 atoms]
A 100.0
/96.1
3
/3
R1A_SARS2 3C-like proteinase nsp5
7tuu[2] D U88
5-nitro-1,3-thiazole[8 atoms]
A 100.0
/96.1
4
/4
R1A_SARS2 3C-like proteinase nsp5
7tuu[2] D U88
5-nitro-1,3-thiazole[8 atoms]
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase nsp5
7ur9[2] C O5F
(2P)-2-(isoquinolin-4-yl)-1-[4-(methylamino)-4-oxo..
A 94.7
/96.1
19
/19
R1AB_SARS2 3C-like proteinase nsp5
7wo1[2] B 3XI
N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene..
A 100.0
/96.1
19
/19
R1A_SARS2 3C-like proteinase
7wo1[2] B 3XI
N-[(2S)-3-methyl-1-[[(2S)-4-methyl-1-oxidanylidene..
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
7xar[2] H BOV
4-fluoranyl-~{N}-[(2~{S})-1-[2-(2-fluoranylethanoy..
A 100.0
/96.1
16
/16
R1A_SARS2 3C-like proteinase
8a4q[2] B V9R
~{tert}-butyl ~{N}-[1-[(2~{R})-3-cyclopropyl-1-oxi..
A 91.7
/96.1
12
/12
R1AB_SARS2 3C-like proteinase nsp5
8a4q[2] B V9R
~{tert}-butyl ~{N}-[1-[(2~{R})-3-cyclopropyl-1-oxi..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8aiq[2] C MXU
~{tert}-butyl ~{N}-[1-[(2~{S})-1-[[(2~{S},3~{R})-4..
A 100.0
/96.1
18
/18
R1AB_SARS2 Replicase polyprotein 1ab
8aiq[1] E MXU
~{tert}-butyl ~{N}-[1-[(2~{S})-1-[[(2~{S},3~{R})-4..
A 100.0
/96.1
1
/1
R1AB_SARS2 Replicase polyprotein 1ab
8aiv[2] C MFL
tert-butyl N-[1-[(2S)-3-cyclopropyl-1-[[(2S,3R)-4-..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase nsp5
8aiv[2] E MFL
tert-butyl N-[1-[(2S)-3-cyclopropyl-1-[[(2S,3R)-4-..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8aiz[1] B MIJ
(2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[2-oxida..
A 100.0
/96.1
18
/18
R1AB_SARS2 Replicase polyprotein 1ab
8bgd[2] B QH0
(phenylmethyl) ~{N}-[(2~{S})-4-methyl-1-[[(2~{S})-..
A 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase nsp5
8cyu[2] F P5X
N-[(4-chlorothiophen-2-yl)methyl]-N-[4-(dimethylam..
B 94.7
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
8cz4[2] G P6R
N-(4-tert-butylphenyl)-N-[(4-chlorothiophen-2-yl)m..
C 94.7
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
8cz4[1] F P6R
N-(4-tert-butylphenyl)-N-[(4-chlorothiophen-2-yl)m..
D 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
8cz7[2] G P7L
N-[(4-chlorothiophen-2-yl)methyl]-2-(isoquinolin-4..
C 94.7
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
8dl9[2] B T4V
1-{4-[(naphthalen-1-yl)methyl]piperazin-1-yl}ethan..
A 100.0
/96.1
11
/11
R1AB_SARS2 3C-like proteinase
8dlb[2] B SRU
1-[(5S)-5-(3,4-dimethoxyphenyl)-3-phenyl-4,5-dihyd..
A 100.0
/96.1
11
/11
R1AB_SARS2 3C-like proteinase
8dmd[2] B SVL
1-[(3R)-4-[(3-chlorophenyl)methyl]-3-(2-methylprop..
A 100.0
/96.1
10
/10
R1AB_SARS2 3C-like proteinase
8ezv[2] B X6O
(1R,2S,5S)-N-{(2S,3R)-4-(azetidin-1-yl)-3-hydroxy-..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase nsp5
8ezz[2] B X70
(1R,2S,5S)-N-{(2S,3R)-4-(3,3-difluoroazetidin-1-yl..
A 100.0
/96.1
22
/22
R1AB_SARS2 3C-like proteinase nsp5
8f02[2] B X6T
(1R,2S,5S)-N-{(2S,3R)-4-(3,3-dimethylazetidin-1-yl..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase nsp5
8f02[2] B X6T
(1R,2S,5S)-N-{(2S,3R)-4-(3,3-dimethylazetidin-1-yl..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8f2c[2] B X9Z
(1R,2S,5S)-N-[(2S,3R)-4-(azetidin-1-yl)-3-hydroxy-..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase nsp5
8f2d[2] B XA8
(1R,2S,5S)-N-[(2S,3R)-4-(azetidin-1-yl)-3-hydroxy-..
A 100.0
/96.1
22
/22
R1AB_SARS2 3C-like proteinase nsp5
8ftc[2] B Y8O
(1R,2S,5S)-3-[N-(difluoroacetyl)-3-methyl-L-valyl]..
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase nsp5
8ftc[2] B Y8O
(1R,2S,5S)-3-[N-(difluoroacetyl)-3-methyl-L-valyl]..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8gtw[1] C K9U
(2S)-4-(3,4-dichlorophenyl)-1-[(2-oxidanylidene-1H..
A 100.0
/96.1
17
/17
R1A_SARS2 3C-like proteinase
8ift[2] B OZB
(8S)-N-[(1S)-1-cyano-2-[(3S)-2-oxidanylidenepyrrol..
A 100.0
/96.1
22
/22
R1A_SARS2 3C-like proteinase nsp5
8okb[2] B VQR
methyl (4~{S})-4-[[(2~{S})-4-methyl-2-(phenylmetho..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase nsp5
8okc[2] B VQN
(phenylmethyl) ~{N}-[(2~{R})-1-[[(~{Z},2~{S})-5-[4..
A 100.0
/96.1
15
/15
R1AB_SARS2 3C-like proteinase nsp5
8okc[2] B VQN
(phenylmethyl) ~{N}-[(2~{R})-1-[[(~{Z},2~{S})-5-[4..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8okk[1] O 83F
tert-butyl-N-[(2S)-3-methyl-1-[(2S,4S)-4-methyl-2-..
B 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase nsp5
8okl[1] I 83N
tert-butyl-N-[(2S)-1-[(2S,4S)-4-methoxy-2-[[(2S)-1..
B 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase nsp5
8okn[1] H 83W
tert-butyl-N-[(2S,3R)-3-[(2-methylpropan-2-yl)oxy]..
B 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase nsp5
8r11[1] C XI0
1-[(2~{S})-2-(3-chlorophenyl)pyrrolidin-1-yl]-2-(5..
A 100.0
/96.1
15
/15
R1A_SARS2 3C-like proteinase
8r12[1] C XH9
2-[[4-(5-chloranylpyridin-3-yl)carbonyl-1,4-diazep..
A 100.0
/96.1
16
/16
R1A_SARS2 3C-like proteinase
8r12[1] E XH9
2-[[4-(5-chloranylpyridin-3-yl)carbonyl-1,4-diazep..
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
8r14[1] C XHW
(5-chloranylpyridin-3-yl)-[4-[(2-chlorophenyl)meth..
A 100.0
/96.1
16
/16
R1A_SARS2 3C-like proteinase
8r14[1] H XHW
(5-chloranylpyridin-3-yl)-[4-[(2-chlorophenyl)meth..
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
8r16[1] C XJ9
1-[6,7-bis(chloranyl)-3,4-dihydro-1H-isoquinolin-2..
A 100.0
/96.1
14
/14
R1A_SARS2 3C-like proteinase
8skh[2] B A1W
2-chloro-1-[(4R,5R)-3,4,5-triphenyl-4,5-dihydro-1H..
A 93.8
/96.1
16
/16
R1AB_SARS2 3C-like proteinase nsp5
8sty[2] B WGE
benzyl (3S)-3-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrol..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase nsp5
8tbe[1] C ZQB
Pomotrelvir bound form[32 atoms]
A 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase nsp5
8tbe[1] D ZQB
Pomotrelvir bound form[32 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8uab[2] B W28
N-[(2S)-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin..
A 100.0
/96.1
17
/17
R1AB_SARS2 3C-like proteinase nsp5
8uh5[2] B WOK
(1R,2S,5S)-N-{(1S,2S)-1-(5-fluoro-1,3-benzothiazol..
A 96.0
/96.1
25
/25
R1AB_SARS2 3C-like proteinase nsp5
6xhl[3] C V2M
N-[(2S)-1-({(2S,3S)-3,4-dihydroxy-1-[(3S)-2-oxopyr..
A 100.0
/100.0
18
/18
R1A_CVHSA 3C-like proteinase
6xr3[2] B V7G
N-[(2S)-1-({(1S,2S)-1-(1,3-benzothiazol-2-yl)-1-hy..
A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7e6k[2] B HYR
N-(2-phenoxyethyl)methanethioamide[12 atoms]
A 100.0
/96.1
6
/6
R1AB_SARS2 3C-like proteinase
7e6k[2] C HYR
N-(2-phenoxyethyl)methanethioamide[12 atoms]
A 100.0
/96.1
11
/11
R1AB_SARS2 3C-like proteinase
7e6k[2] D HYR
N-(2-phenoxyethyl)methanethioamide[12 atoms]
A 100.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase
7ghs[1] N OVX
1-(3-chlorophenyl)-4-(isoquinoline-4-carbonyl)pipe..
B 100.0
/96.1
15
/15
R1AB_SARS2 3C-like proteinase
7ghw[1] S P3L
(4R)-6-chloro-N-[(4R)-2-oxopiperidin-4-yl]-3,4-dih..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gi8[1] R QDF
(4R)-6-chloro-N-(isoquinolin-4-yl)-2-oxo-1,2,3,4-t..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gib[1] M QER
2-(3-fluorophenyl)-N-(isoquinolin-4-yl)acetamide[2..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gih[2] F QG3
2-(3,5-difluorophenyl)-N-(isoquinolin-4-yl)acetami..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gj1[1] N QJR
2-(3,4-dichlorophenyl)-N-(2,7-naphthyridin-4-yl)ac..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gj7[1] N Q0I
(4R)-6-chloro-N-(isoquinolin-4-yl)-N-propanoyl-3,4..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gje[1] M QML
(3S)-5-chloro-N-(isoquinolin-4-yl)-N-propanoyl-2,3..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gl9[1] M QM3
(1'P,3'S)-6-chloro-1'-(isoquinolin-4-yl)-2,3-dihyd..
B 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7glb[1] I R76
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-[2-(methylami..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gld[1] H R8I
(4S)-6-chloro-2-{2-[(cyanomethyl)amino]-2-oxoethyl..
A 100.0
/96.1
15
/15
R1AB_SARS2 3C-like proteinase
7glh[1] I R9E
2-(3-chlorophenyl)-N-(7-fluoro-6-methoxyisoquinoli..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gll[1] H RAQ
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-[(oxan-4-yl)m..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gll[1] L RAQ
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-[(oxan-4-yl)m..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7gls[1] I OE6
N-(1H-benzotriazol-1-yl)-2-(3-chlorophenyl)acetami..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7glu[1] J RD5
2-(5-chloro-2-{[(methanesulfonyl)amino]methyl}phen..
A 92.9
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gm0[1] I RFF
(4S)-6-chloro-2-[(1-cyanocyclopropyl)methanesulfon..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7gm1[1] I RFR
(4S)-6-chloro-N-{6-[(methanesulfonyl)amino]isoquin..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gm5[1] I RGX
(4S)-6-chloro-2-(cyclopropylsulfamoyl)-N-(isoquino..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gm7[1] I RI1
(4S)-6-chloro-N-(isoquinolin-4-yl)-1,1-dioxo-1,2,3..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gme[1] I RJ3
4-[2-(3-chlorophenyl)acetamido]isoquinoline-7-carb..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gme[1] O RJ3
4-[2-(3-chlorophenyl)acetamido]isoquinoline-7-carb..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7gmg[1] I RJO
(4S)-6-chloro-N-(6-fluoroisoquinolin-4-yl)-2-[2-(m..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gmi[1] I RK6
4-[2-(3-chlorophenyl)acetamido]-N-methylisoquinoli..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gmi[1] O RK6
4-[2-(3-chlorophenyl)acetamido]-N-methylisoquinoli..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7gml[1] J RL0
2-(3-chlorophenyl)-N-{6-[(methanesulfonyl)(methyl)..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gmm[1] J RL8
4-[2-(3-chlorophenyl)acetamido]-N-methylisoquinoli..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gmp[1] I RM3
2-(3-chlorophenyl)-N-[7-(dimethylamino)isoquinolin..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gms[1] I RNI
(4S)-6-chloro-2-[(1-cyanocyclopropyl)methanesulfon..
A 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7gmu[1] I RPK
N-(6-acetamidoisoquinolin-4-yl)-2-(3-chlorophenyl)..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gn0[1] I RRD
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-{2-[(oxetan-3..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gn2[1] J RS6
(4S)-6-chloro-N-(7-fluoroisoquinolin-4-yl)-1-oxo-2..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gn3[1] I RSL
4-[2-(3-chlorophenyl)acetamido]isoquinolin-7-yl me..
A 100.0
/96.1
15
/15
R1AB_SARS2 3C-like proteinase
7gn5[1] N RT9
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-[(1-methoxycy..
B 100.0
/96.1
16
/16
R1AB_SARS2 3C-like proteinase
7gn9[1] H RVL
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-[1-(methylcar..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gn9[1] O RVL
(4S)-6-chloro-N-(isoquinolin-4-yl)-2-[1-(methylcar..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7gnc[2] J RW9
2-[(3'S)-6-chloro-1'-(isoquinolin-4-yl)-1,2'-dioxo..
A 100.0
/96.1
14
/14
R1AB_SARS2 3C-like proteinase
7gng[1] J RXU
2-[(3'S)-6-chloro-2'-oxo-1'-(5,6,7,8-tetrahydroiso..
A 100.0
/96.1
13
/13
R1AB_SARS2 3C-like proteinase
7gng[1] Q RXU
2-[(3'S)-6-chloro-2'-oxo-1'-(5,6,7,8-tetrahydroiso..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7grf[1] C XWZ
5-bromopyridin-3-amine[8 atoms]
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
7grf[1] I XWZ
5-bromopyridin-3-amine[8 atoms]
B 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase nsp5
7grg[2] C Y2C
3,5-dichloropyridin-4-amine[9 atoms]
A 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase nsp5
7grg[2] G Y2C
3,5-dichloropyridin-4-amine[9 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
7grj[1] K Y1L
(5-chloro-1-benzothiophen-3-yl)methanol[12 atoms]
B 100.0
/96.1
8
/8
R1AB_SARS2 3C-like proteinase nsp5
7grp[1] C VXQ
1-(2,3-dihydro-1-benzofuran-5-yl)methanamine[11 at..
A 100.0
/96.1
10
/10
R1AB_SARS2 3C-like proteinase nsp5
7gs0[1] D XZE
(pyridin-2-yl)(quinolin-2-yl)methanone[18 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
7gs3[1] D JAH
(6-phenylpyridin-3-yl)methanamine[14 atoms]
A 100.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase nsp5
7gs6[1] I XXN
(3S)-4,7-dichloro-3-hydroxy-1,3-dihydro-2H-indol-2..
B 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase nsp5
7gs6[1] J XXN
(3S)-4,7-dichloro-3-hydroxy-1,3-dihydro-2H-indol-2..
B 100.0
/96.1
12
/12
R1AB_SARS2 3C-like proteinase nsp5
7l8i[1] C AG7
4-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXA..
A 100.0
/96.1
19
/19
R1AB_SARS2 3C-like proteinase
7maw[1] C YVA
ethyl (4R)-4-({3-cyclopropyl-N-[(2E)-3-(4-ethynylp..
A 100.0
/96.1
22
/22
R1AB_SARS2 3C-like proteinase
7maw[1] D YVA
ethyl (4R)-4-({3-cyclopropyl-N-[(2E)-3-(4-ethynylp..
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7mb3[1] H YVV
N-{3-[(prop-2-yn-1-yl)oxy]propanoyl}-D-phenylalany..
C 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7mb3[1] I YVV
N-{3-[(prop-2-yn-1-yl)oxy]propanoyl}-D-phenylalany..
C 100.0
/96.1
20
/20
R1AB_SARS2 3C-like proteinase
7sf3[2] B 90H
(1R,2S,5S)-N-{(2S,3R)-3-hydroxy-4-(methylamino)-4-..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase
8ifp[2] B OZ6
(1R,2S,5S)-3-[(2S)-2-(tert-butylcarbamoylamino)-3,..
A 100.0
/96.1
20
/20
R1A_SARS2 3C-like proteinase nsp5
8igx[2] B PQL
(8~{S})-~{N}-[(1~{S})-1-cyano-2-[(3~{S})-2-oxidany..
A 100.0
/96.1
23
/23
R1A_SARS2 3C-like proteinase nsp5
8tpe[1] D JK0
N-[(1R)-2-(benzylamino)-2-oxo-1-(pyridin-3-yl)ethy..
B 100.0
/96.1
16
/16
R1AB_SARS2 Non-structural protein 7
8tpf[2] B JWI
N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)..
A 100.0
/96.1
15
/15
R1AB_SARS2 Non-structural protein 7
8tpg[4] B JKL
(3R)-N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexyla..
A 100.0
/96.1
15
/15
R1AB_SARS2 Non-structural protein 7
8tpi[2] B JWO
N-(4-tert-butylphenyl)-N-[(1R)-2-(cyclohexylamino)..
A 100.0
/96.1
14
/14
R1AB_SARS2 Non-structural protein 7
7rfs[17] B 4WI
(1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrroli..
A 100.0
/96.1
21
/21
R1AB_SARS2 3C-like proteinase
7u92[4] B M0C
(1R,2S,5S)-N-{(2S,3R)-4-(azetidin-1-yl)-3-hydroxy-..
A 100.0
/96.1
23
/23
R1AB_SARS2 3C-like proteinase
8c9o[1] D O6K
~{tert}-butyl ~{N}-[1-[(2~{S})-3-cyclopropyl-1-oxi..
B 94.4
/95.8
18
/18
R1A_SARS2 3C-like proteinase nsp5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
4382 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2z9g[2] B HG
MERCURY (II) ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA 3C-like proteinase
7lfv[1] DA NH4
AMMONIUM ION[1 atoms]
B 100.0
/100.0
2
/2
R1A_SARS papain-like protease
2fe8[16] D ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA Replicase polyprotein 1ab
2z94[30] B ZN
ZINC ION[1 atoms]
A 100.0
/100.0
2
/2
R1AB_CVHSA Replicase polyprotein 1ab
3e9s[1] C ZN
ZINC ION[1 atoms]
A 100.0
/100.0
5
/5
R1A_CVHSA Non-structural protein 3
5tl6[7] E ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA Replicase polyprotein 1ab
7fac[1] B ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1A_SARS Non-structural protein 2
7fac[1] C ZN
ZINC ION[1 atoms]
A 100.0
/100.0
7
/7
R1A_SARS Non-structural protein 2
7msx[1] B ZN
ZINC ION[1 atoms]
A 100.0
/71.8
4
/4
R1AB_SARS2 Non-structural protein 2
7msx[1] D ZN
ZINC ION[1 atoms]
A 100.0
/71.8
4
/4
R1AB_SARS2 Non-structural protein 2
7skq[1] D ZN
ZINC ION[1 atoms]
A 100.0
/97.8
3
/3
Q0QDZ2_SARS 3C-like proteinase
7skq[1] H ZN
ZINC ION[1 atoms]
A 100.0
/97.8
2
/2
Q0QDZ2_SARS 3C-like proteinase
7skr[2] E ZN
ZINC ION[1 atoms]
A 66.7
/97.8
3
/3
Q0QDZ2_SARS 3C-like proteinase
2a5a[2] B CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
2
/2
R1AB_CVHSA 3C-like peptidase
3e9s[1] D CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
2
/2
R1A_CVHSA Non-structural protein 3
3e9s[1] E CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
4
/4
R1A_CVHSA Non-structural protein 3
6ynq[14] D CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
6yvf[2] C CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase
6yvf[2] D CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
6yvf[2] D CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
6z2e[70] C CL
CHLORIDE ION[1 atoms]
A 33.3
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
6z2e[2] D CL
CHLORIDE ION[1 atoms]
A 80.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase
7af0[2] D CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7avd[2] C CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase
7bb2[46] L CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7ghw[2] Y CL
CHLORIDE ION[1 atoms]
B 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7glb[1] K CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7gnp[2] P CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7gnq[1] O CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7gre[5] O CL
CHLORIDE ION[1 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
7k0h[1] C CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
3
/3
R1A_CVHSA Replicase polyprotein 1a
7k0h[1] D CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
1
/1
R1A_CVHSA Replicase polyprotein 1a
7lfv[1] FA CL
CHLORIDE ION[1 atoms]
B 100.0
/100.0
1
/1
R1A_SARS papain-like protease
7q5e[1] E CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7xar[1] F CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
7xar[1] G CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
2
/2
R1A_SARS2 3C-like proteinase
8r11[2] G CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
3
/3
R1A_SARS2 3C-like proteinase
8r14[2] G CL
CHLORIDE ION[1 atoms]
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
2fe8[6] E BR
BROMIDE ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA Replicase polyprotein 1ab
2fe8[6] F BR
BROMIDE ION[1 atoms]
A 100.0
/100.0
3
/3
R1AB_CVHSA Replicase polyprotein 1ab
2fe8[6] G BR
BROMIDE ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA Replicase polyprotein 1ab
8r11[3] E BR
BROMIDE ION[1 atoms]
A 33.3
/96.1
3
/3
R1A_SARS2 3C-like proteinase
8r11[1] F BR
BROMIDE ION[1 atoms]
A 100.0
/96.1
3
/3
R1A_SARS2 3C-like proteinase
4m0w[1] D NA
SODIUM ION[1 atoms]
A 80.0
/99.7
5
/5
R1A_CVHSA Replicase polyprotein 1a
5y3e[2] C NA
SODIUM ION[1 atoms]
A 100.0
/100.0
4
/4
R1A_CVHSA Replicase polyprotein 1a
5y3e[2] D NA
SODIUM ION[1 atoms]
A 100.0
/100.0
5
/5
R1A_CVHSA Replicase polyprotein 1a
5y3e[2] E NA
SODIUM ION[1 atoms]
A 100.0
/100.0
6
/6
R1A_CVHSA Replicase polyprotein 1a
5y3e[2] F NA
SODIUM ION[1 atoms]
A 100.0
/100.0
3
/3
R1A_CVHSA Replicase polyprotein 1a
5y3e[2] G NA
SODIUM ION[1 atoms]
A 100.0
/100.0
7
/7
R1A_CVHSA Replicase polyprotein 1a
6xbi[1] G NA
SODIUM ION[1 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
6z2e[2] E NA
SODIUM ION[1 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7gnp[1] O NA
SODIUM ION[1 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7gre[2] H NA
SODIUM ION[1 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
7gre[4] H NA
SODIUM ION[1 atoms]
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
7gre[21] N NA
SODIUM ION[1 atoms]
B 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase nsp5
7jyc[4] G NA
SODIUM ION[1 atoms]
A 33.3
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7ntt[1] C NA
SODIUM ION[1 atoms]
A 100.0
/96.1
6
/6
R1A_SARS2 3C-like proteinase
7ntt[1] C NA
SODIUM ION[1 atoms]
B 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
5e6j[1] H NI
NICKEL (II) ION[1 atoms]
A 50.0
/99.1
2
/2
R1AB_CVHSA Replicase polyprotein 1ab
7xar[1] C NI
NICKEL (II) ION[1 atoms]
A 100.0
/96.1
2
/2
R1A_SARS2 3C-like proteinase
7xar[2] D NI
NICKEL (II) ION[1 atoms]
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
7xar[2] E NI
NICKEL (II) ION[1 atoms]
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
7xar[2] J NI
NICKEL (II) ION[1 atoms]
A 100.0
/96.1
1
/1
R1A_SARS2 3C-like proteinase
6yvf[2] L CA
CALCIUM ION[1 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7lcp[2] D CA
CALCIUM ION[1 atoms]
A 100.0
/100.0
3
/3
R1AB_SARS 3C-like proteinase
7lcp[2] E CA
CALCIUM ION[1 atoms]
A 100.0
/100.0
3
/3
R1AB_SARS 3C-like proteinase
7sfh[4] C CA
CALCIUM ION[1 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7gs6[1] M MG
MAGNESIUM ION[1 atoms]
B 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase nsp5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
4382 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1uj1[641] B R1AB_CVHSA 3C-like proteinase[302 aa] A 100.0
/100.0
29
/29
R1AB_CVHSA 3C-like proteinase
2gtb[2] A R1AB_CVHSA 3C-like proteinase[299 aa] A 100.0
/100.0
2
/2
R1AB_CVHSA 3C-like proteinase
2z3e[3] A R1AB_CVHSA Replicase polyprotein 1ab (pp1ab)[306 aa] A 100.0
/100.0
5
/5
R1AB_CVHSA Replicase polyprotein 1ab (pp1ab)
3iwm[4] A R1A_CVHSA 3C-like proteinase[301 aa] A 100.0
/100.0
4
/4
R1A_CVHSA 3C-like proteinase
3iwm[8] B R1A_CVHSA 3C-like proteinase[301 aa] A 100.0
/100.0
1
/1
R1A_CVHSA 3C-like proteinase
3iwm[8] C R1A_CVHSA 3C-like proteinase[300 aa] A 100.0
/100.0
72
/72
R1A_CVHSA 3C-like proteinase
3iwm[8] D R1A_CVHSA 3C-like proteinase[300 aa] A 100.0
/100.0
3
/3
R1A_CVHSA 3C-like proteinase
3iwm[8] D R1A_CVHSA 3C-like proteinase[300 aa] A 100.0
/100.0
5
/5
R1A_CVHSA 3C-like proteinase
7e5x[1] C R1AB_SARS2 3C-like proteinase[306 aa] A 100.0
/96.1
18
/18
R1AB_SARS2 3C-like proteinase
7e5x[1] C R1AB_SARS2 3C-like proteinase[306 aa] B 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7e5x[1] A R1AB_SARS2 3C-like proteinase[306 aa] C 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase
7rm2[8] A R1AB_SARS2 3C-like proteinase[306 aa] A 90.9
/96.1
11
/11
R1AB_SARS2 3C-like proteinase
8uld[2] A R1A_SARS Replicase polyprotein 1a[305 aa] A 100.0
/100.0
31
/31
R1A_SARS Replicase polyprotein 1a
2fe8[6] B R1AB_CVHSA Replicase polyprotein 1ab[314 aa] A 100.0
/100.0
23
/23
R1AB_CVHSA Replicase polyprotein 1ab
2fe8[6] B R1AB_CVHSA Replicase polyprotein 1ab[314 aa] A 100.0
/100.0
8
/9
R1AB_CVHSA Replicase polyprotein 1ab
2fe8[7] C R1AB_CVHSA Replicase polyprotein 1ab[313 aa] A 100.0
/100.0
18
/18
R1AB_CVHSA Replicase polyprotein 1ab
7skq[1] B Q0QDZ2_SARS 3C-like proteinase[304 aa] A 100.0
/97.8
20
/20
Q0QDZ2_SARS 3C-like proteinase
7skr[2] A Q0QDZ2_SARS 3C-like proteinase[314 aa] A 100.0
/97.8
27
/27
Q0QDZ2_SARS 3C-like proteinase
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
4382 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2a5a[17] D EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
5
/5
R1AB_CVHSA 3C-like peptidase
3vb3[1] D EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
5
/5
R1A_CVHSA 3C-like proteinase
3vb3[5] E EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
4
/4
R1A_CVHSA 3C-like proteinase
3vb3[1] F EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
6
/6
R1A_CVHSA 3C-like proteinase
3vb3[3] G EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
5
/5
R1A_CVHSA 3C-like proteinase
3vb3[5] H EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
6
/6
R1A_CVHSA 3C-like proteinase
3vb3[1] I EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
3
/3
R1A_CVHSA 3C-like proteinase
3vb4[2] G EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
2
/2
R1A_CVHSA 3C-like proteinase
3vb4[11] J EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
2
/2
R1A_CVHSA 3C-like proteinase
3vb4[3] I EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1A_CVHSA 3C-like proteinase
3vb4[1] L EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
5
/5
R1A_CVHSA 3C-like proteinase
3vb7[1] G EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
5
/5
R1A_CVHSA 3C-like proteinase
7bb2[1] I EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/96.1
8
/8
R1AB_SARS2 3C-like proteinase
7bb2[1] J EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7bb2[5] K EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7lcq[2] B EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
7
/7
R1AB_SARS 3C-like proteinase
7lcq[3] C EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
1
/1
R1AB_SARS 3C-like proteinase
7lfv[1] F EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
4
/4
R1A_SARS papain-like protease
7lfv[1] H EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
4
/4
R1A_SARS papain-like protease
7lfv[5] I EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
3
/3
R1A_SARS papain-like protease
7lfv[1] J EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
4
/4
R1A_SARS papain-like protease
7lfv[1] K EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
4
/4
R1A_SARS papain-like protease
7lfv[1] L EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
3
/3
R1A_SARS papain-like protease
7lfv[1] M EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
5
/5
R1A_SARS papain-like protease
7lfv[1] N EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
4
/4
R1A_SARS papain-like protease
7lfv[2] O EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
4
/4
R1A_SARS papain-like protease
7lfv[2] Q EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/100.0
5
/5
R1A_SARS papain-like protease
7lfv[1] BA EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
4
/4
R1A_SARS papain-like protease
7lfv[1] T EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1A_SARS papain-like protease
7lfv[1] V EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
2
/2
R1A_SARS papain-like protease
7lfv[1] X EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
3
/3
R1A_SARS papain-like protease
8okk[1] F EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8okk[1] V EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
8okn[3] J EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
2gt7[1] C MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms]
B 100.0
/100.0
1
/1
R1AB_CVHSA 3C-like proteinase
2v6n[8] C MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms]
A 100.0
/100.0
5
/5
R1AB_CVHSA REPLICASE POLYPROTEIN 1AB
6w79[4] E MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms]
A 100.0
/100.0
3
/3
Main protease
2gtb[2] C ACY
ACETIC ACID[4 atoms]
A 100.0
/100.0
5
/5
R1AB_CVHSA 3C-like proteinase
2z9g[2] C BNZ
BENZENE[6 atoms]
A 100.0
/100.0
7
/7
R1AB_CVHSA 3C-like proteinase
2z9j[2] E DTZ
zinc(II)hydrogensulfide[3 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA 3C-like proteinase
2z9k[2] E DOZ
(dimethylamino)(hydroxy)zinc'[5 atoms]
A 100.0
/100.0
5
/5
R1AB_CVHSA 3C-like proteinase
2z9l[2] E DAZ
diaminozinc[3 atoms]
A 100.0
/100.0
2
/2
R1AB_CVHSA 3C-like proteinase
3snd[1] E MRD
(4R)-2-METHYLPENTANE-2,4-DIOL[8 atoms]
A 100.0
/100.0
6
/6
R1A_CVHSA 3C-like proteinase
5y3q[1] C BME
BETA-MERCAPTOETHANOL[4 atoms]
A 100.0
/100.0
6
/6
R1A_CVHSA Replicase polyprotein 1a
7k0h[1] G PG4
TETRAETHYLENE GLYCOL[13 atoms]
B 100.0
/100.0
10
/10
R1A_CVHSA Replicase polyprotein 1a
7mpb[1] F ETF
TRIFLUOROETHANOL[6 atoms]
B 100.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase
2a5i[14] D GOL
GLYCEROL[6 atoms]
A 100.0
/100.0
5
/5
R1AB_CVHSA 3C-like peptidase
2z3e[2] D GOL
GLYCEROL[6 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA Replicase polyprotein 1ab (pp1ab)
3vb4[1] K GOL
GLYCEROL[6 atoms]
B 100.0
/100.0
4
/4
R1A_CVHSA 3C-like proteinase
3vb7[8] H GOL
GLYCEROL[6 atoms]
B 100.0
/100.0
6
/6
R1A_CVHSA 3C-like proteinase
4m0w[1] G GOL
GLYCEROL[6 atoms]
A 100.0
/99.7
5
/5
R1A_CVHSA Replicase polyprotein 1a
4m0w[3] H GOL
GLYCEROL[6 atoms]
A 100.0
/99.7
6
/6
R1A_CVHSA Replicase polyprotein 1a
4ow0[1] F GOL
GLYCEROL[6 atoms]
A 100.0
/100.0
3
/3
R1A_CVHSA papain-like protease
5y3e[2] I GOL
GLYCEROL[6 atoms]
A 100.0
/100.0
6
/6
R1A_CVHSA Replicase polyprotein 1a
5y3e[1] J GOL
GLYCEROL[6 atoms]
A 100.0
/100.0
5
/5
R1A_CVHSA Replicase polyprotein 1a
6xbi[1] E GOL
GLYCEROL[6 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
6xbi[1] F GOL
GLYCEROL[6 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7cuu[1] H GOL
GLYCEROL[6 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C protein
7cuu[1] F GOL
GLYCEROL[6 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C protein
7cuu[1] H GOL
GLYCEROL[6 atoms]
B 100.0
/96.1
4
/4
R1AB_SARS2 3C protein
7dpu[1] E GOL
GLYCEROL[6 atoms]
B 100.0
/96.1
4
/4
R1A_SARS2 3C-like proteinase
7lmg[13] B GOL
GLYCEROL[6 atoms]
A 100.0
/100.0
8
/8
R1A_SARS 3C-like proteinase
7zb7[2] E GOL
GLYCEROL[6 atoms]
A 100.0
/95.8
7
/7
R1AB_SARS2 3C-like proteinase nsp5
8dsu[1] C GOL
GLYCEROL[6 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
8r11[1] D GOL
GLYCEROL[6 atoms]
A 100.0
/96.1
3
/3
R1A_SARS2 3C-like proteinase
2fe8[7] H SO4
SULFATE ION[5 atoms]
A 100.0
/100.0
4
/4
R1AB_CVHSA Replicase polyprotein 1ab
2v6n[2] D SO4
SULFATE ION[5 atoms]
A 100.0
/100.0
2
/2
R1AB_CVHSA REPLICASE POLYPROTEIN 1AB
5tl6[1] F SO4
SULFATE ION[5 atoms]
A 100.0
/100.0
3
/3
R1AB_CVHSA Replicase polyprotein 1ab
7e6k[3] G SO4
SULFATE ION[5 atoms]
A 100.0
/96.1
8
/8
R1AB_SARS2 3C-like proteinase
7e6k[6] H SO4
SULFATE ION[5 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7lfv[1] R SO4
SULFATE ION[5 atoms]
A 100.0
/100.0
2
/2
R1A_SARS papain-like protease
7lfv[1] S SO4
SULFATE ION[5 atoms]
A 100.0
/100.0
4
/4
R1A_SARS papain-like protease
2vj1[825] C DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/100.0
1
/1
A7J8L3_CVHSA SARS CORONAVIRUS MAIN PROTEINASE
2vj1[1] F DMS
DIMETHYL SULFOXIDE[4 atoms]
B 100.0
/100.0
3
/3
A7J8L3_CVHSA SARS CORONAVIRUS MAIN PROTEINASE
3tiu[37] B DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/100.0
6
/6
R1A_CVHSA SARS coronavirus main protease
4ovz[2] E DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/100.0
4
/4
R1A_CVHSA Papain-like proteinase
4ow0[1] G DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/100.0
5
/5
R1A_CVHSA papain-like protease
6ynq[44] C DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
6yvf[10] G DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
6yvf[38] H DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7abu[2] I DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7awr[5] E DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7aww[18] I DMS
DIMETHYL SULFOXIDE[4 atoms]
A 66.7
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7ax6[2] C DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7ax6[2] D DMS
DIMETHYL SULFOXIDE[4 atoms]
A 50.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7buy[29] E DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7cuu[1] C DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C protein
7ghm[15] R DMS
DIMETHYL SULFOXIDE[4 atoms]
B 50.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7ghq[4] F DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7ghs[6] Q DMS
DIMETHYL SULFOXIDE[4 atoms]
B 100.0
/96.1
5
/5
R1AB_SARS2 3C-like proteinase
7ghz[3] M DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7gj7[3] Q DMS
DIMETHYL SULFOXIDE[4 atoms]
B 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7gnp[1] L DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7grh[6] Q DMS
DIMETHYL SULFOXIDE[4 atoms]
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
7grh[1] S DMS
DIMETHYL SULFOXIDE[4 atoms]
B 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase nsp5
7grh[2] V DMS
DIMETHYL SULFOXIDE[4 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
7mhl[2] C DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7mhl[2] E DMS
DIMETHYL SULFOXIDE[4 atoms]
A 75.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7rc1[2] G DMS
DIMETHYL SULFOXIDE[4 atoms]
A 100.0
/100.0
1
/1
R1A_SARS 3C-like proteinase
3vb3[6] C PEG
DI(HYDROXYETHYL)ETHER[7 atoms]
A 100.0
/100.0
4
/4
R1A_CVHSA 3C-like proteinase
6yvf[2] I PEG
DI(HYDROXYETHYL)ETHER[7 atoms]
A 75.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
6yvf[2] J PEG
DI(HYDROXYETHYL)ETHER[7 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
6yvf[2] K PEG
DI(HYDROXYETHYL)ETHER[6 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7lmg[4] E PEG
DI(HYDROXYETHYL)ETHER[7 atoms]
A 100.0
/100.0
2
/2
R1A_SARS 3C-like proteinase
7lmg[4] E PEG
DI(HYDROXYETHYL)ETHER[7 atoms]
A 100.0
/100.0
1
/1
R1A_SARS 3C-like proteinase
7lmj[2] G PEG
DI(HYDROXYETHYL)ETHER[7 atoms]
A 100.0
/100.0
3
/3
R1A_SARS 3C-like proteinase
8uh5[2] C PEG
DI(HYDROXYETHYL)ETHER[7 atoms]
A 75.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase nsp5
5e6j[1] G ACT
ACETATE ION[4 atoms]
A 100.0
/99.1
6
/6
R1AB_CVHSA Replicase polyprotein 1ab
8okk[1] P ACT
ACETATE ION[4 atoms]
B 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase nsp5
8okk[1] Q ACT
ACETATE ION[4 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
8okk[1] T ACT
ACETATE ION[4 atoms]
B 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase nsp5
7abu[4] C IMD
IMIDAZOLE[5 atoms]
A 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase
7aqi[2] E IMD
IMIDAZOLE[5 atoms]
A 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase
7aqi[2] E IMD
IMIDAZOLE[5 atoms]
A 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase
7ax6[2] E IMD
IMIDAZOLE[5 atoms]
A 100.0
/96.1
7
/7
R1AB_SARS2 3C-like proteinase
7axm[4] G IMD
IMIDAZOLE[5 atoms]
A 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase
7ntt[1] D FMT
FORMIC ACID[3 atoms]
B 100.0
/96.1
5
/5
R1A_SARS2 3C-like proteinase
8okk[1] I FMT
FORMIC ACID[3 atoms]
B 100.0
/96.1
1
/1
R1AB_SARS2 3C-like proteinase nsp5
8okk[1] U FMT
FORMIC ACID[3 atoms]
B 100.0
/96.1
2
/2
R1AB_SARS2 3C-like proteinase nsp5
8okl[1] F FMT
FORMIC ACID[3 atoms]
B 100.0
/96.1
3
/3
R1AB_SARS2 3C-like proteinase nsp5
8okk[3] S MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms]
B 100.0
/96.1
4
/4
R1AB_SARS2 3C-like proteinase nsp5
8r14[1] D PGE
TRIETHYLENE GLYCOL[10 atoms]
A 100.0
/96.1
3
/3
R1A_SARS2 3C-like proteinase
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.