Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
8994 97 20 P0DTD2(ORF9B_SARS2) RecName: Full=ORF9b protein; Short=ORF9b;AltName: Full=Accessory protein 9b;AltName: Full=ORF-9b;AltName: Full=Protein 9b;
QUERYSEQ
MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P0DTD2(ORF9B_SARS2)]

97
region name description
1-97 CHAIN /note="ORF9b protein" /id="PRO_0000449657"
8-97 DOMAIN /note="9b"
1-4 DISORDER predicted by DISOPRED

MONOMER
97
pdb_id a1 identity[%]2 description
7ye8 B 100.0 ORF9B_SARS2 ORF9b protein
6z4u A 100.0 ORF9B_SARS2 Protein 9b
6z4u B 100.0 ORF9B_SARS2 Protein 9b
7ye8 A 100.0 ORF9B_SARS2 ORF9b protein
7ye7 B 100.0 ORF9B_SARS2 ORF9b protein
7ye8 D 100.0 ORF9B_SARS2 ORF9b protein
7ye8 C 100.0 ORF9B_SARS2 ORF9b protein
7ye7 D 100.0 ORF9B_SARS2 ORF9b protein
7ye7 A 100.0 ORF9B_SARS2 ORF9b protein
7ye7 C 100.0 ORF9B_SARS2 ORF9b protein
2cme B 80.5 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme A 80.3 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme F 81.3 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme D 81.3 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme H 81.3 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme C 81.3 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme E 81.3 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme G 81.3 Y5_CVHSA HYPOTHETICAL PROTEIN 5
7kdt B 100.0 ORF9B_SARS2 ORF9b protein
7dhg B 100.0 ORF9B_SARS2 ORF9b protein
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
97 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7dhg A TOM70_HUMAN Mitochondrial import receptor subunit TOM70[470 aa.. B 100.0
/100.0
29
/29
ORF9B_SARS2 ORF9b protein
7kdt A TOM70_HUMAN Mitochondrial import receptor subunit TOM70[467 aa.. B 100.0
/100.0
28
/28
ORF9B_SARS2 ORF9b protein
2cme B Y5_CVHSA HYPOTHETICAL PROTEIN 5[79 aa] A 84.4
/80.3
32
/32
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme A Y5_CVHSA HYPOTHETICAL PROTEIN 5[78 aa] B 84.4
/80.5
32
/32
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme F Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] E 83.9
/81.3
31
/31
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme E Y5_CVHSA HYPOTHETICAL PROTEIN 5[77 aa] F 83.9
/81.3
31
/31
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme H Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] G 84.4
/81.3
32
/32
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme G Y5_CVHSA HYPOTHETICAL PROTEIN 5[77 aa] H 84.4
/81.3
32
/32
Y5_CVHSA HYPOTHETICAL PROTEIN 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
97 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6z4u C 15P
POLYETHYLENE GLYCOL (N=34)[14 atoms]
B 100.0
/100.0
7
/7
ORF9B_SARS2 Protein 9b
7ye7 E DD9
nonane[9 atoms]
A 100.0
/100.0
1
/1
ORF9B_SARS2 ORF9b protein
7ye7 E DD9
nonane[9 atoms]
B 100.0
/100.0
2
/2
ORF9B_SARS2 ORF9b protein
7ye7 F OCT
N-OCTANE[8 atoms]
C 100.0
/100.0
3
/3
ORF9B_SARS2 ORF9b protein
7ye7 F OCT
N-OCTANE[8 atoms]
D 100.0
/100.0
1
/1
ORF9B_SARS2 ORF9b protein
7ye8 E OCT
N-OCTANE[8 atoms]
A 100.0
/100.0
2
/2
ORF9B_SARS2 ORF9b protein
7ye8 E OCT
N-OCTANE[8 atoms]
B 100.0
/100.0
2
/2
ORF9B_SARS2 ORF9b protein
7ye8 F OCT
N-OCTANE[8 atoms]
C 100.0
/100.0
2
/2
ORF9B_SARS2 ORF9b protein
7ye8 F OCT
N-OCTANE[8 atoms]
D 100.0
/100.0
1
/1
ORF9B_SARS2 ORF9b protein
2cme I D10
DECANE[10 atoms]
A 100.0
/80.3
2
/2
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme I D10
DECANE[10 atoms]
B 100.0
/80.5
2
/2
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme J D10
DECANE[10 atoms]
C 100.0
/81.3
3
/3
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme J D10
DECANE[10 atoms]
D 100.0
/81.3
2
/2
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme K D10
DECANE[10 atoms]
E 100.0
/81.3
2
/2
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme K D10
DECANE[10 atoms]
F 100.0
/81.3
3
/3
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme L D10
DECANE[10 atoms]
H 100.0
/81.3
2
/2
Y5_CVHSA HYPOTHETICAL PROTEIN 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
97 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6z4u B ORF9B_SARS2 Protein 9b[82 aa] A 100.0
/100.0
33
/33
ORF9B_SARS2 Protein 9b
6z4u A ORF9B_SARS2 Protein 9b[84 aa] B 100.0
/100.0
34
/34
ORF9B_SARS2 Protein 9b
7ye7 A ORF9B_SARS2 ORF9b protein[74 aa] B 100.0
/100.0
31
/31
ORF9B_SARS2 ORF9b protein
7ye7 D ORF9B_SARS2 ORF9b protein[74 aa] C 100.0
/100.0
33
/33
ORF9B_SARS2 ORF9b protein
7ye7 C ORF9B_SARS2 ORF9b protein[72 aa] D 100.0
/100.0
31
/31
ORF9B_SARS2 ORF9b protein
7ye8 A ORF9B_SARS2 ORF9b protein[79 aa] B 100.0
/100.0
39
/39
ORF9B_SARS2 ORF9b protein
7ye8 D ORF9B_SARS2 ORF9b protein[78 aa] C 100.0
/100.0
34
/34
ORF9B_SARS2 ORF9b protein
7ye8 C ORF9B_SARS2 ORF9b protein[75 aa] D 100.0
/100.0
34
/34
ORF9B_SARS2 ORF9b protein
7ye7 B ORF9B_SARS2 ORF9b protein[78 aa] A 100.0
/100.0
32
/32
ORF9B_SARS2 ORF9b protein
7ye8 B ORF9B_SARS2 ORF9b protein[88 aa] A 100.0
/100.0
34
/34
ORF9B_SARS2 ORF9b protein
2cme D Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] C 84.4
/81.3
32
/32
Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme C Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] D 84.4
/81.3
32
/32
Y5_CVHSA HYPOTHETICAL PROTEIN 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.