Contact Molecules for Homologous Proteins

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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
25525 98 20 P59636(ORF9B_SARS) RecName: Full=ORF9b protein;AltName: Full=Accessory protein 9b;AltName: Full=ORF-9b;AltName: Full=Protein 9b;
QUERYSEQ 
MDPNQTNVVPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P59636(ORF9B_SARS)]

98
region name description
1-98 CHAIN /note="ORF9b protein" /id="PRO_0000106137"
9-98 DOMAIN /note="9b"
1-4 DISORDER predicted by DISOPRED

MONOMER
98
pdb_id a1 identity[%]2 description
2cme B 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme A 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme G 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme E 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme F 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme D 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme H 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme C 98.7 Y5_CVHSA HYPOTHETICAL PROTEIN 5
7ye8 B 77.3 ORF9B_SARS2 ORF9b protein
7ye8 A 80.8 ORF9B_SARS2 ORF9b protein
7ye7 B 79.2 ORF9B_SARS2 ORF9b protein
6z4u A 77.4 ORF9B_SARS2 Protein 9b
7ye8 D 81.6 ORF9B_SARS2 ORF9b protein
7ye7 D 82.2 ORF9B_SARS2 ORF9b protein
6z4u B 82.4 ORF9B_SARS2 Protein 9b
7ye7 A 82.4 ORF9B_SARS2 ORF9b protein
7ye8 C 80.0 ORF9B_SARS2 ORF9b protein
7ye7 C 83.1 ORF9B_SARS2 ORF9b protein
7kdt B 76.3 ORF9B_SARS2 ORF9b protein
7dhg B 75.0 ORF9B_SARS2 ORF9b protein 
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
98 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2cme B Y5_CVHSA HYPOTHETICAL PROTEIN 5[79 aa] A 96.9
/98.7		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme A Y5_CVHSA HYPOTHETICAL PROTEIN 5[78 aa] B 96.9
/98.7		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme F Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] E 96.8
/98.7		 31
/31		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme E Y5_CVHSA HYPOTHETICAL PROTEIN 5[77 aa] F 96.8
/98.7		 31
/31		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme H Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] G 96.9
/98.7		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme G Y5_CVHSA HYPOTHETICAL PROTEIN 5[77 aa] H 96.9
/98.7		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
7dhg A TOM70_HUMAN Mitochondrial import receptor subunit TOM70[470 aa.. B 75.9
/75.0		 29
/29		 ORF9B_SARS2 ORF9b protein
7kdt A TOM70_HUMAN Mitochondrial import receptor subunit TOM70[467 aa.. B 82.1
/76.3		 28
/28		 ORF9B_SARS2 ORF9b protein
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
98 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2cme I D10
DECANE[10 atoms] 		A 100.0
/98.7		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme I D10
DECANE[10 atoms] 		B 100.0
/98.7		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme J D10
DECANE[10 atoms] 		C 100.0
/98.7		 3
/3		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme J D10
DECANE[10 atoms] 		D 100.0
/98.7		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme K D10
DECANE[10 atoms] 		E 100.0
/98.7		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme K D10
DECANE[10 atoms] 		F 100.0
/98.7		 3
/3		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme L D10
DECANE[10 atoms] 		H 100.0
/98.7		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
6z4u C 15P
POLYETHYLENE GLYCOL (N=34)[14 atoms] 		B 100.0
/82.4		 7
/7		 ORF9B_SARS2 Protein 9b
7ye7 F OCT
N-OCTANE[8 atoms] 		C 100.0
/83.1		 3
/3		 ORF9B_SARS2 ORF9b protein
7ye7 F OCT
N-OCTANE[8 atoms] 		D 100.0
/82.2		 1
/1		 ORF9B_SARS2 ORF9b protein
7ye8 E OCT
N-OCTANE[8 atoms] 		A 100.0
/80.8		 2
/2		 ORF9B_SARS2 ORF9b protein
7ye8 E OCT
N-OCTANE[8 atoms] 		B 100.0
/77.3		 2
/2		 ORF9B_SARS2 ORF9b protein
7ye8 F OCT
N-OCTANE[8 atoms] 		C 100.0
/80.0		 2
/2		 ORF9B_SARS2 ORF9b protein
7ye8 F OCT
N-OCTANE[8 atoms] 		D 100.0
/81.6		 1
/1		 ORF9B_SARS2 ORF9b protein
7ye7 E DD9
nonane[9 atoms] 		A 100.0
/82.4		 1
/1		 ORF9B_SARS2 ORF9b protein
7ye7 E DD9
nonane[9 atoms] 		B 100.0
/79.2		 2
/2		 ORF9B_SARS2 ORF9b protein
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
98 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2cme D Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] C 96.9
/98.7		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme C Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] D 96.9
/98.7		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
7ye7 B ORF9B_SARS2 ORF9b protein[78 aa] A 81.2
/82.4		 32
/32		 ORF9B_SARS2 ORF9b protein
6z4u B ORF9B_SARS2 Protein 9b[82 aa] A 78.8
/77.4		 33
/33		 ORF9B_SARS2 Protein 9b
6z4u A ORF9B_SARS2 Protein 9b[84 aa] B 76.5
/82.4		 34
/34		 ORF9B_SARS2 Protein 9b
7ye7 A ORF9B_SARS2 ORF9b protein[74 aa] B 83.3
/79.2		 30
/31		 ORF9B_SARS2 ORF9b protein
7ye7 D ORF9B_SARS2 ORF9b protein[74 aa] C 78.1
/83.1		 32
/33		 ORF9B_SARS2 ORF9b protein
7ye7 C ORF9B_SARS2 ORF9b protein[72 aa] D 80.0
/82.2		 30
/31		 ORF9B_SARS2 ORF9b protein
7ye8 A ORF9B_SARS2 ORF9b protein[79 aa] B 79.5
/77.3		 39
/39		 ORF9B_SARS2 ORF9b protein
7ye8 D ORF9B_SARS2 ORF9b protein[78 aa] C 79.4
/80.0		 34
/34		 ORF9B_SARS2 ORF9b protein
7ye8 C ORF9B_SARS2 ORF9b protein[75 aa] D 81.8
/81.6		 33
/34		 ORF9B_SARS2 ORF9b protein
7ye8 B ORF9B_SARS2 ORF9b protein[88 aa] A 79.4
/80.8		 34
/34		 ORF9B_SARS2 ORF9b protein
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.