Contact Molecules for Homologous Proteins


[Full Bars]

[SiteTable]


Summary Bars[50 %]


[Back to Search Page]

[Back to HOMCOS]

[SupCon3D]

[help]
seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100]
[show] [download] [help]
PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
10770 675 26 Q8N3R9(PALS1_HUMAN) RecName: Full=Protein PALS1 ;AltName: Full=MAGUK p55 subfamily member 5;AltName: Full=Membrane protein, palmitoylated 5 ;AltName: Full=Protein associated with Lin-7 1 ;
QUERYSEQ
MTTSHMNGHVTEESDSEVKNVDLASPEEHQKHREMAVDCPGDLGTRMMPIRRSAQLERIRQQQEDMRRRREEEGKKQELDLNSSMRLKKLAQIPPKTGIDNPMFDTEEGIVLESPHYAVKILEIEDLFSSLKHIQHTLVDSQSQEDISLL
LQLVQNKDFQNAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQTVLKPVHHKEGQELTALLNTPHIQALLLAHDKVAEQEMQLEPITDERVYESIGQYGGETVKIVRIEKARDIPLGATVRNEMDSVIISRIVKGGAAEKSGLLHEGDE
VLEINGIEIRGKDVNEVFDLLSDMHGTLTFVLIPSQQIKPPPAKETVIHVKAHFDYDPSDDPYVPCRELGLSFQKGDILHVISQEDPNWWQAYREGDEDNQPLAGLVPGKSFQQQREAMKQTIEEDKEPEKSGKLWCAKKNKKKRKKVLY
NANKNDDYDNEEILTYEEMSLYHQPANRKRPIILIGPQNCGQNELRQRLMNKEKDRFASAVPHTTRSRRDQEVAGRDYHFVSRQAFEADIAAGKFIEHGEFEKNLYGTSIDSVRQVINSGKICLLSLRTQSLKTLRNSDLKPYIIFIAPP
SQERLRALLAKEGKNPKPEELREIIEKTREMEQNNGHYFDTAIVNSDLDKAYQELLRLINKLDTEPQWVPSTWLR
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [Q8N3R9(PALS1_HUMAN)]

675
region name description
1-675 CHAIN /note="Protein PALS1" /id="PRO_0000094580"
120-177 DOMAIN /note="L27 1"
179-235 DOMAIN /note="L27 2"
256-336 DOMAIN /note="PDZ"
345-417 DOMAIN /note="SH3"
479-660 DOMAIN /note="Guanylate kinase-like"
1-345 REGION /note="Required for the correct localization of PALS1 and PATJ at cell-cell contacts and the normal formation of tight junctions and adherens junctions"
1-34 REGION /note="Disordered"
21-140 REGION /note="Interaction with PARD6B"
51-78 REGION /note="Disordered"
181-243 REGION /note="Interaction with LIN7C"
10-34 COMPBIAS /note="Basic and acidic residues"
57-78 COMPBIAS /note="Basic and acidic residues"
486-493 BINDING /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616"
1-469 DISORDER predicted by DISOPRED

MONOMER
675
pdb_id a1 identity[%]2 description
4wsi A 100.0 MPP5_HUMAN MPP5_HUMAN MAGUK p55 subfamily member 5
3uit D 100.0 INADL_MOUSE MPP5_HUMAN LIN7B_RAT InaD-like protein, MAGUK p55 subfamily member 5, Protein lin-7 homolog B
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
675 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1y76[2] A MPDZ_RAT protein associated to tight junctions[62 aa] B 100.0
/100.0
4
/4
MPP5_HUMAN MAGUK p55 subfamily member 5
1y76[2] C MPDZ_RAT protein associated to tight junctions[62 aa] B 100.0
/100.0
26
/26
MPP5_HUMAN MAGUK p55 subfamily member 5
4uu5[1] B CRUM1_HUMAN PROTEIN CRUMBS HOMOLOG 1[14 aa] A 100.0
/100.0
13
/13
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
4wsi[2] C CRB_DROME Protein crumbs[18 aa] A 100.0
/100.0
37
/37
MPP5_HUMAN MPP5_HUMAN MAGUK p55 subfamily member 5
7m4r[1] C VEMP_SARS2 Envelope small membrane protein[9 aa] A 100.0
/100.0
11
/11
MPP5_HUMAN MPP5_HUMAN MAGUK p55 subfamily member 5
7ntj[1] B VEMP_SARS Envelope small membrane protein[4 aa] A 100.0
/100.0
13
/13
MPP5_HUMAN MAGUK p55 subfamily member 5
7ntj[1] D VEMP_SARS Envelope small membrane protein[7 aa] C 100.0
/100.0
13
/13
MPP5_HUMAN MAGUK p55 subfamily member 5
7ntk[3] C VEMP_SARS2 Envelope small membrane protein[7 aa] A 100.0
/100.0
12
/12
MPP5_HUMAN MAGUK p55 subfamily member 5
7ntk[1] H VEMP_SARS2 Envelope small membrane protein[6 aa] F 100.0
/100.0
14
/14
MPP5_HUMAN MAGUK p55 subfamily member 5
7qcs[2] C VEMP_SARS2 Envelope small membrane protein[5 aa] A 100.0
/100.0
14
/14
PALS1_HUMAN Protein PALS1
1vf6[4] A INADL_HUMAN PALS1-associated tight junction protein[58 aa] C 100.0
/91.7
20
/20
MPP5_MOUSE MAGUK p55 subfamily member 5
1vf6[4] B INADL_HUMAN PALS1-associated tight junction protein[60 aa] C 50.0
/91.7
2
/2
MPP5_MOUSE MAGUK p55 subfamily member 5
2vwf[1] B GAB2_HUMAN GRB2-ASSOCIATED-BINDING PROTEIN 2[14 aa] A 71.4
/51.2
7
/10
GRB2_HUMAN GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
2w0z[1] B GAB2_HUMAN GRB2-ASSOCIATED-BINDING PROTEIN 2[9 aa] A 71.4
/51.2
7
/10
GRB2_HUMAN GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
675 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
4uu5[1] K PUN
2,2,4,4,6,6,8-heptamethylnonane[16 atoms]
A 100.0
/100.0
2
/2
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
675 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
4uu5[3] F CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
1
/1
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
4uu5[1] G CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
2
/2
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
4uu5[1] I CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
1
/1
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
4uu5[1] L CL
CHLORIDE ION[1 atoms]
A 100.0
/100.0
1
/1
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
4uu5[1] J NA
SODIUM ION[1 atoms]
A 100.0
/100.0
3
/3
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
675 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1y76[2] D MPP5_HUMAN MAGUK p55 subfamily member 5[60 aa] B 100.0
/100.0
6
/6
MPP5_HUMAN MAGUK p55 subfamily member 5
7m4r[1] B MPP5_HUMAN MPP5_HUMAN MAGUK p55 subfamily member 5[270 aa] A 100.0
/100.0
20
/20
MPP5_HUMAN MPP5_HUMAN MAGUK p55 subfamily member 5
7m4r[1] A MPP5_HUMAN MPP5_HUMAN MAGUK p55 subfamily member 5[360 aa] B 100.0
/100.0
19
/19
MPP5_HUMAN MPP5_HUMAN MAGUK p55 subfamily member 5
7qcs[2] B PALS1_HUMAN Protein PALS1[98 aa] A 100.0
/100.0
9
/9
PALS1_HUMAN Protein PALS1
7qcs[1] E PALS1_HUMAN Protein PALS1[82 aa] A 100.0
/100.0
2
/2
PALS1_HUMAN Protein PALS1
7qcs[1] A PALS1_HUMAN Protein PALS1[97 aa] E 100.0
/100.0
1
/1
PALS1_HUMAN Protein PALS1
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
675 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3uit[2] E ACT
ACETATE ION[4 atoms]
A 100.0
/100.0
2
/3
INADL_MOUSE MPP5_HUMAN LIN7B_RAT InaD-like protein, MAGUK p55 subfamily member 5, P..
3uit[4] G ACT
ACETATE ION[4 atoms]
A 100.0
/100.0
1
/2
INADL_MOUSE MPP5_HUMAN LIN7B_RAT InaD-like protein, MAGUK p55 subfamily member 5, P..
3uit[2] H ACT
ACETATE ION[4 atoms]
A 100.0
/100.0
2
/5
INADL_MOUSE MPP5_HUMAN LIN7B_RAT InaD-like protein, MAGUK p55 subfamily member 5, P..
3uit[2] J ACT
ACETATE ION[4 atoms]
A 100.0
/100.0
3
/3
INADL_MOUSE MPP5_HUMAN LIN7B_RAT InaD-like protein, MAGUK p55 subfamily member 5, P..
3uit[1] K ACT
ACETATE ION[4 atoms]
A 100.0
/100.0
1
/5
INADL_MOUSE MPP5_HUMAN LIN7B_RAT InaD-like protein, MAGUK p55 subfamily member 5, P..
3uit[1] O ACT
ACETATE ION[4 atoms]
B 100.0
/100.0
1
/3
INADL_MOUSE MPP5_HUMAN LIN7B_RAT InaD-like protein, MAGUK p55 subfamily member 5, P..
4uu6[1] D ACT
ACETATE ION[4 atoms]
A 100.0
/100.0
1
/1
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
4uu6[1] B GOL
GLYCEROL[6 atoms]
A 100.0
/100.0
6
/6
MPP5_HUMAN MAGUK P55 SUBFAMILY MEMBER 5
7ntk[1] I FLC
CITRATE ANION[13 atoms]
B 100.0
/100.0
2
/2
MPP5_HUMAN MAGUK p55 subfamily member 5
7ntk[2] J EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
1
/2
MPP5_HUMAN MAGUK p55 subfamily member 5
7ntk[1] K EDO
1,2-ETHANEDIOL[4 atoms]
B 100.0
/100.0
1
/1
MPP5_HUMAN MAGUK p55 subfamily member 5
7ntk[1] M EDO
1,2-ETHANEDIOL[4 atoms]
D 100.0
/100.0
5
/5
MPP5_HUMAN MAGUK p55 subfamily member 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.