Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
11352 740 500 Q92499(DDX1_HUMAN) RecName: Full=ATP-dependent RNA helicase DDX1; EC=3.6.4.13 ;AltName: Full=DEAD box protein 1;AltName: Full=DEAD box protein retinoblastoma; Short=DBP-RB;
QUERYSEQ
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWS
TMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAE
QTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNP
KTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAAGGGSYKGHVDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [Q92499(DDX1_HUMAN)]

740
region name description
1-740 CHAIN /note="ATP-dependent RNA helicase DDX1" /id="PRO_0000054986"
2-428 DOMAIN /note="Helicase ATP-binding"
70-247 DOMAIN /note="B30.2/SPRY"
493-681 DOMAIN /note="Helicase C-terminal"
1-525 REGION /note="Necessary for interaction with RELA"
1-448 REGION /note="Interaction with dsRNA"
1-295 REGION /note="Necessary for interaction with HNRNPK"
525-740 REGION /note="Necessary for interaction with HNRNPK"
536-631 REGION /note="Necessary for interaction with replicase polyprotein 1ab nsp14 of IBV"
46-53 BINDING /ligand="ATP" /ligand_id="ChEBI:CHEBI:30616"
1-718 DISORDER predicted by DISOPRED

MONOMER
740
pdb_id a1 identity[%]2 description
8tbx A 100.0 DDX1_HUMAN DDX1_HUMAN ATP-dependent RNA helicase DDX1
4xw3 B 100.0 A3RJH1_HUMAN ATP-dependent RNA helicase DDX1
4kbf B 37.1 Q72GF3_THET2 Heat resistant RNA dependent ATPase
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
740 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6elz[2] FA CIC1_YEAST Proteasome-interacting protein CIC1[257 aa] HA 0.0
/44.3
1
/15
HAS1_YEAST ATP-dependent RNA helicase HAS1
5nt7[2] B OSKA_DROME Maternal effect protein oskar[92 aa] A 34.8
/40.2
23
/23
VASA1_DROME ATP-dependent RNA helicase vasa, isoform A
6f9s[2] B Q9XW17_CAEEL Cytokinesis, Apoptosis, RNA-associated[43 aa] A 25.0
/39.6
8
/28
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6
6f9s[2] B Q9XW17_CAEEL Cytokinesis, Apoptosis, RNA-associated[43 aa] A 33.3
/39.6
3
/3
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6
8esq[4] AB NOP16_SCHPO Nucleolar protein 16[161 aa] J 0.0
/38.9
2
/8
HAS1_SCHPO ATP-dependent RNA helicase has1
8esq[7] NA RL36B_SCHPO 60S ribosomal protein L36-B[85 aa] J 14.3
/38.9
7
/8
HAS1_SCHPO ATP-dependent RNA helicase has1
8euy[1] Q RL13_SCHPO 60S ribosomal protein L13[116 aa] J 0.0
/39.4
1
/1
HAS1_SCHPO ATP-dependent RNA helicase has1
8c6j[1] IA DHX8_HUMAN ATP-dependent RNA helicase DHX8[934 aa] L 33.3
/38.9
3
/3
DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41
8fkp[10] LA RL1D1_HUMAN Ribosomal L1 domain-containing protein 1[243 aa] TA 0.0
/38.7
1
/14
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fkp[10] T RL36_HUMAN 60S ribosomal protein L36[102 aa] TA 25.0
/38.7
8
/9
DDX18_HUMAN ATP-dependent RNA helicase DDX18
2wax[5] B EDC3_HUMAN ENHANCER OF MRNA-DECAPPING PROTEIN 3[30 aa] A 0.0
/39.6
1
/20
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
2yjt[1] A D8AM26_ECOLX REGULATOR OF RIBONUCLEASE ACTIVITY A[158 aa] D 50.0
/38.1
14
/17
SRMB_ECOLI ATP-DEPENDENT RNA HELICASE SRMB
8i9x[4] E ERB1_CHATD Ribosome biogenesis protein ERB1[658 aa] G 0.0
/33.9
3
/33
G0RYU9_CHATD RNA helicase
8ia0[1] E ERB1_CHATD Ribosome biogenesis protein ERB1[658 aa] Y 0.0
/37.7
1
/2
G0RYG4_CHATD ATP-dependent RNA helicase
8i9z[2] PA G0S9T3_CHATD Ribosomal protein L19[148 aa] Y 12.5
/36.9
8
/9
G0RYG4_CHATD ATP-dependent RNA helicase
8i9z[2] U G0SGD8_CHATD AdoMet-dependent rRNA methyltransferase SPB1[625 a.. Y 0.0
/36.9
1
/11
G0RYG4_CHATD ATP-dependent RNA helicase
8i9z[2] XA G0SEI0_CHATD 60S ribosomal protein l30-like protein[98 aa] Y 18.2
/36.9
11
/11
G0RYG4_CHATD ATP-dependent RNA helicase
8ia0[1] CA G0S7E9_CHATD Nucleolar protein 12[117 aa] Y 28.6
/37.7
14
/14
G0RYG4_CHATD ATP-dependent RNA helicase
2vso[4] C IF4F1_YEAST EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150[239 a.. A 35.0
/36.5
20
/30
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A
2vsx[2] D IF4F1_YEAST EUKARYOTIC INITIATION FACTOR 4F SUBUNIT P150[237 a.. A 0.0
/36.5
3
/3
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A
7ymf[1] B DDX3X_HUMAN ATP-dependent RNA helicase DDX3X[154 aa] A 0.0
/36.1
3
/9
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
3peu[2] B GLE1_YEAST Nucleoporin GLE1[295 aa] A 36.4
/46.0
11
/24
DBP5_YEAST ATP-dependent RNA helicase DBP5
3peu[2] B GLE1_YEAST Nucleoporin GLE1[295 aa] A 40.0
/46.0
10
/14
DBP5_YEAST ATP-dependent RNA helicase DBP5
3rrm[2] B GLE1_YEAST Nucleoporin GLE1[295 aa] A 33.3
/34.5
21
/27
DBP5_YEAST ATP-dependent RNA helicase DBP5
4crw[1] A CNOT1_HUMAN CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1[226 aa] B 30.0
/39.6
10
/14
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
4ct4[2] A CNOT1_HUMAN CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1[236 aa] B 29.2
/36.0
24
/25
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
5anr[2] A CNOT1_HUMAN CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1[245 aa] B 50.0
/35.7
14
/17
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
5anr[2] C 4ET_HUMAN EUKARYOTIC TRANSLATION INITIATION FACTOR 4E TRANSP.. B 23.8
/35.7
21
/24
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
6yxx[2] K D0A1K1_TRYB9 bL35m[133 aa] Q 66.7
/34.4
3
/7
D0A9G9_TRYB9 DEAD-box helicase, putative
7aoi[1] E A0A3L6L070_9TRYP bL33m[142 aa] NB 50.0
/35.6
2
/5
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2
6yxx[2] N Q57TZ4_TRYB2 mt-EngA[532 aa] Q 0.0
/34.4
3
/21
D0A9G9_TRYB9 DEAD-box helicase, putative
7aoi[1] WB C9ZS56_TRYB9 GTP-binding protein, putative,mt-EngA[521 aa] NB 0.0
/35.6
2
/21
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2
6yxx[2] XA Q586A6_TRYB2 mL84[196 aa] Q 0.0
/34.4
4
/6
D0A9G9_TRYB9 DEAD-box helicase, putative
7aoi[1] OA A0A3L6L538_9TRYP mL84[195 aa] NB 20.0
/35.6
5
/8
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2
7aoi[1] LB UNK11[47 aa] NB 0.0
/35.6
1
/1
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2
7aoi[1] TB mt-LAF8[402 aa] NB 0.0
/35.6
4
/9
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2
4brw[1] B PAT1_YEAST DNA TOPOISOMERASE 2-ASSOCIATED PROTEIN PAT1[30 aa].. A 12.5
/35.5
24
/24
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1
8i9t[4] J NOG1_CHATD Nucleolar GTP-binding protein 1[476 aa] Y 16.7
/35.4
6
/29
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
8i9t[4] PA G0SI44_CHATD 60S ribosomal protein l23-like protein[135 aa] Y 0.0
/35.4
6
/7
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
8i9v[1] R G0SHQ0_CHATD RNA methyltransferase nop2-like protein[324 aa] AA 0.0
/35.4
1
/13
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
8i9v[1] V G0S5L0_CHATD Nucleolar complex-associated protein 3[458 aa] AA 0.0
/35.4
3
/3
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
4bru[1] B EDC3_YEAST ENHANCER OF MRNA-DECAPPING PROTEIN 3[29 aa] A 23.5
/35.4
17
/20
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1
6qx9[1] QA RUXG_HUMAN Small nuclear ribonucleoprotein G[73 aa] AA 0.0
/35.3
2
/2
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
7oi6[1] QA MRM3_HUMAN rRNA methyltransferase 3, mitochondrial[253 aa] OA 33.3
/35.1
3
/3
DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28
7oi6[1] UA RM38_HUMAN 39S ribosomal protein L38, mitochondrial[325 aa] OA 60.0
/35.1
5
/5
DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28
7evn[1] B SF3B1_HUMAN Splicing factor 3B subunit 1[815 aa] E 0.0
/35.0
6
/33
DDX42_HUMAN ATP-dependent RNA helicase DDX42
8fkt[6] N RL23_HUMAN 60S ribosomal protein L23[134 aa] AA 0.0
/34.9
7
/9
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fkt[6] UA GTPB4_HUMAN GTP-binding protein 4[449 aa] AA 33.3
/34.9
6
/35
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fkv[2] CB NOP2_HUMAN Probable 28S rRNA (cytosine(4447)-C(5))-methyltran.. CA 0.0
/34.9
1
/13
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fkv[2] ZA NOC3L_HUMAN Nucleolar complex protein 3 homolog[561 aa] CA 37.5
/34.9
8
/19
DDX54_HUMAN ATP-dependent RNA helicase DDX54
6s8r[1] B GGYF1_DROME GIGYF family protein CG11148[27 aa] A 11.1
/34.9
9
/21
DDX6_DROME ATP-dependent RNA helicase me31b
6b4i[4] C GLE1_HUMAN Nucleoporin GLE1[314 aa] E 27.3
/34.7
22
/24
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3rrm[1] C NU159_YEAST Nucleoporin NUP159[370 aa] A 47.6
/34.5
21
/21
DBP5_YEAST ATP-dependent RNA helicase DBP5
7znk[2] BA THOC4_HUMAN THO complex subunit 4[16 aa] FA 0.0
/34.4
2
/2
DX39B_HUMAN Spliceosome RNA helicase DDX39B
2hyi[17] C MGN_HUMAN Protein mago nashi homolog[144 aa] E 9.7
/34.4
31
/33
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48
6qdv[7] F MGN2_HUMAN Protein mago nashi homolog 2[144 aa] D 9.7
/34.4
31
/33
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
2hyi[9] D RBM8A_HUMAN RNA-binding protein 8A[91 aa] E 0.0
/34.4
1
/1
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48
2j0q[3] D RBM8A_HUMAN RNA-BINDING PROTEIN 8A[89 aa] A 0.0
/34.4
3
/3
DDX48_HUMAN ATP-DEPENDENT RNA HELICASE DDX48
6qdv[1] E RBM8A_HUMAN RNA-binding protein 8A[91 aa] D 0.0
/34.4
1
/1
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
7znj[6] C RBM8A_HUMAN RNA-binding protein 8A[91 aa] A 0.0
/33.7
2
/2
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally ..
7znj[6] H RBM8A_HUMAN RNA-binding protein 8A[91 aa] A 12.5
/33.7
8
/8
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally ..
2hyi[9] F CASC3_HUMAN Protein CASC3[56 aa] E 20.5
/34.4
39
/41
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48
2xb2[1] F REN3B_HUMAN REGULATOR OF NONSENSE TRANSCRIPTS 3B[15 aa] A 57.1
/34.4
7
/11
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
2xb2[1] J REN3B_HUMAN REGULATOR OF NONSENSE TRANSCRIPTS 3B[17 aa] K 50.0
/34.4
6
/9
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4c9b[1] B CWC22_HUMAN PRE-MRNA-SPLICING FACTOR CWC22 HOMOLOG[277 aa] A 44.1
/34.0
34
/39
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
6yvh[4] A CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[274 aa] F 42.9
/40.6
7
/23
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6yvh[1] E CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[272 aa] F 50.0
/40.6
12
/12
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
7a5p[1] S CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[253 aa] UA 50.0
/34.4
2
/2
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
5xjc[5] C U5S1_HUMAN 116 kDa U5 small nuclear ribonucleoprotein compone.. UA 0.0
/34.4
6
/9
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
5xjc[3] V CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[452 aa] UA 30.0
/34.4
10
/11
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6icz[4] V CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[452 aa] C 100.0
/34.4
1
/1
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6qdv[1] N CWC22_HUMAN Pre-mRNA-splicing factor CWC22 homolog[459 aa] D 30.0
/34.4
10
/11
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
5xjc[6] XA CASC3_HUMAN Protein CASC3[25 aa] UA 22.2
/34.4
18
/18
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6qdv[1] G PRP8_HUMAN Pre-mRNA-processing-splicing factor 8[2250 aa] D 0.0
/34.4
1
/1
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6qw6[2] R PRP8_HUMAN Pre-mRNA-processing-splicing factor 8[2212 aa] X 0.0
/35.3
1
/59
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
8c6j[1] H PRP8_HUMAN Pre-mRNA-processing-splicing factor 8[2261 aa] E 0.0
/34.4
1
/1
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6yxx[2] CA A0A1G4IEQ9_TRYEQ mt-LAF8[443 aa] Q 0.0
/34.4
4
/10
D0A9G9_TRYB9 DEAD-box helicase, putative
6yxx[2] CC mL52[184 aa] Q 0.0
/34.4
2
/2
D0A9G9_TRYB9 DEAD-box helicase, putative
6yxx[1] R Q38FJ3_TRYB2 Pseudouridylate synthase, putative[373 aa] Q 0.0
/34.4
1
/13
D0A9G9_TRYB9 DEAD-box helicase, putative
6zmw[1] EB IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1.. DB 33.3
/33.9
15
/22
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
6zmw[1] F EIF3E_HUMAN Eukaryotic translation initiation factor 3 subunit.. DB 0.0
/33.9
1
/1
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
6zmw[1] U EIF3L_HUMAN Eukaryotic translation initiation factor 3 subunit.. DB 40.0
/33.9
5
/5
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
7ppz[2] A Q63UP7_BURPS Burkholderia Lethal Factor 1 (BLF1)[209 aa] B 47.1
/33.3
34
/34
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
8huj[1] B IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1.. A 43.8
/33.9
16
/22
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
8oz0[1] EB IF4G1_HUMAN Eukaryotic translation initiation factor 4 gamma 1.. DB 0.0
/33.9
3
/3
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
8oz0[1] Q RS7_HUMAN 40S ribosomal protein S7[178 aa] DB 0.0
/33.9
1
/2
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
8i9p[9] CA G0SBN1_CHATD 60S ribosomal protein L36[88 aa] F 0.0
/33.9
2
/2
G0RYU9_CHATD RNA helicase
8i9p[9] D G0S7X0_CHATD Ribosome biogenesis protein C8F11.04[269 aa] F 0.0
/33.9
4
/12
G0RYU9_CHATD RNA helicase
8i9p[2] E ERB1_CHATD Ribosome biogenesis protein ERB1[258 aa] F 0.0
/33.9
3
/32
G0RYU9_CHATD RNA helicase
8i9p[9] J G0S832_CHATD Nucleolar protein 16[167 aa] F 33.3
/33.9
9
/14
G0RYU9_CHATD RNA helicase
8i9p[1] P G0S992_CHATD 60S ribosomal protein L13[117 aa] F 0.0
/33.9
1
/1
G0RYU9_CHATD RNA helicase
8i9t[3] F ERB1_CHATD Ribosome biogenesis protein ERB1[289 aa] G 0.0
/33.9
3
/28
G0RYU9_CHATD RNA helicase
7znj[6] D MALE_ECO57 THOC4_HUMAN Maltose/maltodextrin-binding periplasmic protein,T.. A 20.0
/33.7
10
/10
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally ..
7znj[6] X MALE_ECO57 THOC4_HUMAN Maltose/maltodextrin-binding periplasmic protein,T.. A 0.0
/33.7
4
/4
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally ..
8enk[2] C THO1_YEAST Protein THO1[53 aa] A 45.5
/33.8
11
/11
DX39B_HUMAN Spliceosome RNA helicase DDX39B
2zu6[4] B PDCD4_HUMAN Programmed cell death protein 4[284 aa] A 42.1
/33.5
38
/38
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
3eiq[2] B PDCD4_MOUSE Programmed cell death protein 4[278 aa] A 40.6
/32.7
32
/32
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
2j0u[1] C CASC3_HUMAN PROTEIN CASC3[9 aa] A 27.3
/33.5
11
/11
DDX48_HUMAN ATP-DEPENDENT RNA HELICASE DDX48
7ddx[1] A E9Q238_MOUSE KN motif and ankyrin repeat domains 1[246 aa] B 22.2
/32.8
9
/10
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
7nac[2] DA ERB1_YEAST Ribosome biogenesis protein ERB1[666 aa] FB 100.0
/32.1
2
/2
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7nac[2] EB A0A6A5Q2X9_YEASX RRP17 isoform 1[141 aa] FB 9.1
/32.1
11
/13
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7nac[4] PA RL19A_YEAST 60S ribosomal protein L19-A[134 aa] FB 0.0
/32.1
4
/9
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7nac[3] RA RL27A_YEAST 60S ribosomal protein L27-A[135 aa] FB 100.0
/32.1
1
/1
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7nac[4] TA RL30_YEAST 60S ribosomal protein L30[97 aa] FB 0.0
/32.1
5
/5
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7nad[2] S Ribosome biogenesis protein ERB1[412 aa] Z 100.0
/32.1
2
/2
A0A8H8UL81_YEASX SPB4 isoform 1
7r72[1] W SPB1_YEAST 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransfer.. X 0.0
/32.1
1
/3
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7r7a[1] CB SPB1_YEAST 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransfer.. EB 0.0
/32.1
1
/2
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
5suq[1] E Tho2, Hpr1, Mft1, and Thp2[2231 aa] A 15.4
/32.0
13
/13
SUB2_YEAST ATP-dependent RNA helicase SUB2
5suq[1] E Tho2, Hpr1, Mft1, and Thp2[2231 aa] C 0.0
/32.0
1
/1
SUB2_YEAST ATP-dependent RNA helicase SUB2
5suq[1] F Tho2, Hpr1, Mft1, and Thp2[2230 aa] A 0.0
/32.0
1
/1
SUB2_YEAST ATP-dependent RNA helicase SUB2
5suq[1] F Tho2, Hpr1, Mft1, and Thp2[2230 aa] C 25.0
/32.0
16
/16
SUB2_YEAST ATP-dependent RNA helicase SUB2
7apx[3] A THO2_YEAST THO complex subunit 2,Tho2[1165 aa] F 10.0
/34.6
10
/17
SUB2_YEAST ATP-dependent RNA helicase SUB2
7v2y[1] B THO2_YEAST THO complex subunit 2[1226 aa] F 20.0
/32.0
40
/42
SUB2_YEAST ATP-dependent RNA helicase SUB2
7luv[1] C THO2_YEAST THO complex subunit 2[911 aa] F 27.8
/32.0
18
/20
SUB2_YEAST ATP-dependent RNA helicase SUB2
5sup[2] E YRA1_YEAST RNA annealing protein YRA1[17 aa] A 23.1
/31.8
13
/13
SUB2_YEAST ATP-dependent RNA helicase SUB2
5sup[1] F YRA1_YEAST RNA annealing protein YRA1[15 aa] C 23.1
/31.8
13
/13
SUB2_YEAST ATP-dependent RNA helicase SUB2
7apk[4] X THOC2_HUMAN THO complex subunit 2[707 aa] CA 23.1
/31.5
13
/20
DX39B_HUMAN Spliceosome RNA helicase DDX39B
7znk[8] Z THOC2_HUMAN THO complex subunit 2[914 aa] FA 29.4
/34.4
17
/19
DX39B_HUMAN Spliceosome RNA helicase DDX39B
8uxl[2] J CALM1_HUMAN Calmodulin-1[143 aa] H 0.0
/25.1
1
/1
RYR2_HUMAN Ryanodine receptor 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
NUCLEOTIDE
740 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6elz[1] A 25S ribosomal RNA HA 0.0
/44.3
1
/5
HAS1_YEAST ATP-dependent RNA helicase HAS1
8eti[1] A RNA (1564-MER) J 20.0
/41.9
5
/6
HAS1_SCHPO ATP-dependent RNA helicase has1
8eup[1] A RNA (1422-MER) J 28.6
/41.8
7
/10
S6CCW7_SCHPM RNA helicase
8esr[1] A RNA (2142-MER) I 16.7
/39.5
6
/10
HAS1_SCHPO ATP-dependent RNA helicase has1
8ev3[1] A RNA (1452-MER) J 18.2
/39.5
11
/16
S6CCW7_SCHPM RNA helicase
8euy[1] A RNA (1095-MER) J 16.7
/39.4
6
/11
HAS1_SCHPO ATP-dependent RNA helicase has1
8esq[1] B RNA (2231-MER) J 14.3
/38.9
7
/12
HAS1_SCHPO ATP-dependent RNA helicase has1
8eth[1] A RNA (1263-MER) J 12.5
/38.9
8
/12
HAS1_SCHPO ATP-dependent RNA helicase has1
4db2[2] E 5'-R(*GP*GP*GP*CP*GP*GP*GP*CP*CP*CP*GP*CP*CP*C)-3'.. A 0.0
/38.7
1
/4
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4db2[3] F 5'-R(*GP*GP*GP*CP*GP*GP*GP*CP*CP*CP*GP*CP*CP*C)-3'.. A 85.7
/38.7
7
/13
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
8fkp[1] C 28S rRNA TA 0.0
/38.7
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fkq[1] C 28S rRNA PA 0.0
/38.7
1
/5
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fkr[1] D 28S rRNA XA 0.0
/38.7
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fks[1] D 28S rRNA TA 0.0
/38.7
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fkt[1] E 28S rRNA AA 25.0
/34.9
4
/22
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fkt[1] E 28S rRNA YA 0.0
/38.7
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fku[1] E 28S rRNA BA 16.7
/34.9
6
/26
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fku[1] E 28S rRNA VA 0.0
/38.7
2
/5
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fkw[1] E 28S rRNA DA 28.6
/34.9
7
/47
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fkw[1] E 28S rRNA YA 0.0
/38.7
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fkx[1] E 28S rRNA DA 42.9
/34.9
7
/35
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fkx[1] E 28S rRNA YA 0.0
/38.7
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
2db3[3] A 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' E 76.2
/33.8
21
/21
VASA_DROME ATP-dependent RNA helicase vasa
6uv1[2] C RNA rU10 A 73.9
/38.0
23
/23
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv2[1] B RNA 125a_oligo1 A 72.0
/38.0
25
/25
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv3[1] B 125a-oligo2 A 72.0
/38.0
25
/25
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv4[1] B 18a_oligo1 A 68.0
/38.0
25
/25
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
8ia0[1] A RNA (3341-MER) G 25.0
/33.9
8
/18
G0RYU9_CHATD RNA helicase
8ia0[1] A RNA (3341-MER) Y 53.3
/37.7
30
/58
G0RYG4_CHATD ATP-dependent RNA helicase
8i9z[1] A RNA (3341-MER) G 22.2
/33.9
9
/19
G0RYU9_CHATD RNA helicase
8i9z[1] A RNA (3341-MER) Y 48.5
/36.9
33
/56
G0RYG4_CHATD ATP-dependent RNA helicase
4d25[2] B 5'-R(*UP*GP*AP*CP*AP*UP)-3' A 70.8
/36.5
24
/24
O01378_BOMMO BMVLG PROTEIN
7pmm[1] C RNA (45mer) containing HP92 of the 23S rRNA A 63.0
/36.5
27
/27
DBPA_ECOLI ATP-dependent RNA helicase DbpA
7pmm[1] C RNA (45mer) containing HP92 of the 23S rRNA B 25.0
/36.5
8
/21
DBPA_ECOLI ATP-dependent RNA helicase DbpA
7pmm[1] D RNA (45mer) containing HP92 of the 23S rRNA A 25.0
/36.5
8
/28
DBPA_ECOLI ATP-dependent RNA helicase DbpA
7pmm[1] D RNA (45mer) containing HP92 of the 23S rRNA B 57.1
/36.5
28
/28
DBPA_ECOLI ATP-dependent RNA helicase DbpA
7pmq[4] E RNA (42-MER) A 60.7
/36.5
28
/28
W8TF60_ECOLX ATP-dependent RNA helicase DbpA
7pmq[4] H RNA (42-MER) A 30.0
/36.5
10
/31
W8TF60_ECOLX ATP-dependent RNA helicase DbpA
7pli[5] B RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. A 20.0
/36.5
10
/30
DBPA_ECOLI ATP-dependent RNA helicase DbpA
7pli[5] D RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. A 75.0
/36.5
20
/20
DBPA_ECOLI ATP-dependent RNA helicase DbpA
7pli[1] F RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. E 22.2
/36.5
9
/29
DBPA_ECOLI ATP-dependent RNA helicase DbpA
7pli[1] F RNA (5'-D(*(POP))-R(P*GP*GP*AP*CP*AP*UP*AP*UP*GP*G.. K 72.7
/36.2
22
/22
DBPA_ECOLI ATP-dependent RNA helicase DbpA
3i5x[3] B 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' A 77.3
/36.0
22
/35
MS116_YEAST ATP-dependent RNA helicase MSS116
3i5y[1] B 5'-R(*UP*UP*UP*(5BU)P*UP*UP*UP*UP*UP*U)-3' A 73.9
/36.0
23
/35
MS116_YEAST ATP-dependent RNA helicase MSS116
3sqw[2] B RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') A 80.0
/36.0
20
/26
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4tyn[1] A DNA (5'-D(P*AP*AP*AP*AP*AP*AP*A)-3') B 73.9
/36.0
23
/29
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4tyw[3] B RNA (5'-R(P*AP*AP*AP*AP*AP*AP*A)-3') A 81.0
/36.0
21
/27
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4tyy[1] A RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') B 78.9
/36.0
19
/26
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
3fht[2] C RNA (5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3') A 41.7
/35.0
24
/25
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
7aoi[1] F mt-LSU rRNA NB 34.6
/35.6
26
/152
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2
8i9t[1] A RNA (3341-MER) G 22.2
/33.9
9
/19
G0RYU9_CHATD RNA helicase
8i9t[1] A RNA (3341-MER) Y 63.6
/35.4
11
/29
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
8i9w[1] A RNA (3341-MER) F 20.0
/33.9
10
/21
G0RYU9_CHATD RNA helicase
8i9w[1] A RNA (3341-MER) Z 38.5
/35.4
13
/53
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
6qx9[1] A U1 snRNA AA 64.7
/35.3
17
/17
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
6qx9[1] H AdML pre-mRNA AA 0.0
/35.3
2
/2
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
7oi6[1] NA 16S rRNA OA 33.3
/35.1
21
/28
DDX28_HUMAN Probable ATP-dependent RNA helicase DDX28
3g0h[1] B 5'-R(P*UP*UP*UP*UP*UP*UP*U)-3' A 44.0
/35.0
25
/26
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
8fkv[1] E 28S rRNA BB 0.0
/38.7
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fkv[1] E 28S rRNA CA 33.3
/34.9
9
/47
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8fky[1] F 28S rRNA EB 0.0
/38.6
1
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
8fky[1] F 28S rRNA IA 42.9
/34.9
7
/36
DDX54_HUMAN ATP-dependent RNA helicase DDX54
2xb2[1] G RNA POLY-U-RIBONUCLEOTIDE K 78.3
/34.4
23
/23
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
6l5n[2] C poly(U)-15mer A 69.6
/34.5
23
/23
DDX21_HUMAN Nucleolar RNA helicase 2
6o5f[1] C RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. A 61.5
/34.4
13
/15
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
6o5f[1] C RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. B 0.0
/34.4
4
/5
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
6o5f[1] D RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. A 0.0
/34.4
4
/5
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
6o5f[1] D RNA (5'-R(P*CP*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*GP*CP.. B 61.5
/34.4
13
/16
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
7znk[2] B RNA FA 63.6
/34.4
11
/11
DX39B_HUMAN Spliceosome RNA helicase DDX39B
2xb2[1] D RNA POLY-U-RIBONUCLEOTIDE A 66.7
/34.4
27
/27
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
5xjc[1] G pre-mRNA UA 66.7
/34.4
27
/27
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
5yzg[1] G Pre-mRNA FA 66.7
/34.4
27
/27
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
8c6j[1] S PM5 5' Exon E 58.6
/34.4
29
/29
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6yxx[1] L 12S ribosomal RNA Q 36.0
/34.4
25
/148
D0A9G9_TRYB9 DEAD-box helicase, putative
6yxy[1] F 12S ribosomal RNA J 37.5
/34.4
24
/181
D0A9G9_TRYB9 mt-LAF2
5zc9[1] B RNA (5'-R(*AP*GP*AP*GP*AP*GP*AP*GP*AP*G)-3') A 61.5
/33.9
26
/26
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
6xki[1] B RNA (5'-R(*AP*GP*AP*GP*AP*GP*AP*GP*AP*G)-3') A 61.5
/33.9
26
/26
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
8i9p[1] A RNA (3341-MER) F 22.2
/33.9
9
/20
G0RYU9_CHATD RNA helicase
8i9r[1] A RNA (3341-MER) F 36.4
/33.9
11
/22
G0RYU9_CHATD RNA helicase
8i9v[1] A RNA (3341-MER) AA 33.3
/35.4
12
/48
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
8i9v[1] A RNA (3341-MER) G 30.0
/33.9
10
/21
G0RYU9_CHATD RNA helicase
8i9x[1] A RNA (3341-MER) AA 50.0
/35.4
14
/57
G0S5S8_CHATD ATP-dependent RNA helicase DBP10
8i9x[1] A RNA (3341-MER) G 30.0
/33.9
10
/20
G0RYU9_CHATD RNA helicase
8i9y[1] A RNA (3341-MER) G 12.5
/33.9
8
/17
G0RYU9_CHATD RNA helicase
2j0q[3] E 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP*U).. A 73.9
/34.4
23
/23
DDX48_HUMAN ATP-DEPENDENT RNA HELICASE DDX48
5sup[4] G RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') A 59.1
/31.8
22
/22
SUB2_YEAST ATP-dependent RNA helicase SUB2
2db3[1] D 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' H 76.2
/33.8
21
/21
VASA_DROME ATP-dependent RNA helicase vasa
2hyi[4] A 5'-R(*UP*UP*UP*UP*UP*U)-3' E 68.0
/34.4
25
/25
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48
3pew[2] B RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') A 69.6
/35.0
23
/23
DBP5_YEAST ATP-dependent RNA helicase DBP5
5elx[1] B RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3') A 69.6
/34.7
23
/23
DBP5_YEAS7 ATP-dependent RNA helicase DBP5
7znj[6] E RNA A 69.6
/33.7
23
/23
IF4A3_HUMAN Eukaryotic initiation factor 4A-III, N-terminally ..
8enk[1] E RNA B 50.0
/33.6
22
/22
DX39B_HUMAN Spliceosome RNA helicase DDX39B
6y5q[1] V U2snRNA F 0.0
/32.7
2
/2
DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46
7evo[1] A U2 snRNA L 0.0
/32.7
2
/2
A0A0C4DG89_HUMAN RNA helicase
7oqb[2] U U2 snRNA T 12.5
/32.2
8
/9
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP..
6y53[1] S U2 snRNA D 0.0
/32.1
2
/2
DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46
7nac[1] A 25S rRNA FB 50.0
/32.1
32
/66
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7nad[1] A 25S rRNA Z 46.9
/32.1
32
/68
A0A8H8UL81_YEASX SPB4 isoform 1
7r72[1] A 25S rRNA X 51.6
/32.1
31
/65
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
7r7a[1] A 25S rRNA EB 51.5
/32.1
33
/67
SPB4_YEAS7 ATP-dependent rRNA helicase SPB4
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
740 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1xtj[34] C ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
A 50.0
/33.5
14
/14
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
3ews[10] C ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
A 66.7
/34.8
3
/18
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3i61[2] C ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
A 56.2
/36.0
16
/16
MS116_YEAST ATP-dependent RNA helicase MSS116
5dtu[1] B ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
A 66.7
/32.6
12
/12
G0SBQ7_CHATD Prp28
6b4i[2] I ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
E 66.7
/34.7
3
/17
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
8arp[6] G ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
A 73.3
/38.5
15
/15
DBP2_YEAST ATP-dependent RNA helicase DBP2
8fkt[6] LD ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
AA 77.8
/34.9
9
/9
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8i9z[2] KB ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
Y 78.6
/36.9
14
/14
G0RYG4_CHATD ATP-dependent RNA helicase
5gvr[1] B LMR
(2S)-2-hydroxybutanedioic acid[9 atoms]
A 100.0
/38.9
1
/8
DDX41_HUMAN Probable ATP-dependent RNA helicase DDX41
2wax[2] F CXS
3-CYCLOHEXYL-1-PROPYLSULFONIC ACID[14 atoms]
A 33.3
/39.6
3
/5
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
2wax[4] G CXS
3-CYCLOHEXYL-1-PROPYLSULFONIC ACID[14 atoms]
A 33.3
/39.6
3
/7
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
3mwl[1] F 8OX
6-azanyl-9-[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxy..
B 57.1
/36.7
14
/14
Q72GF3_THET2 Heat resistant RNA dependent ATPase
3mwk[3] F 8OP
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,..
B 53.8
/36.7
13
/13
Q72GF3_THET2 Heat resistant RNA dependent ATPase
3nbf[1] I 8OP
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,..
C 0.0
/36.7
5
/5
Q72GF3_THET2 Heat resistant RNA dependent ATPase
3nbf[2] E 8OD
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,..
A 57.1
/36.7
14
/14
Q72GF3_THET2 Heat resistant RNA dependent ATPase
3nbf[4] F 8OD
[(2R,3S,4R,5R)-5-(6-azanyl-8-oxo-7H-purin-9-yl)-3,..
A 70.0
/36.7
10
/10
Q72GF3_THET2 Heat resistant RNA dependent ATPase
4tyy[1] D CDP
CYTIDINE-5'-DIPHOSPHATE[25 atoms]
B 60.0
/36.0
15
/15
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4tz0[1] C GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms]
A 50.0
/36.0
16
/16
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4tz6[1] D UDP
URIDINE-5'-DIPHOSPHATE[25 atoms]
A 57.1
/36.0
14
/14
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
3rrn[1] D IHP
INOSITOL HEXAKISPHOSPHATE[36 atoms]
A 0.0
/35.7
2
/4
DBP5_YEAST ATP-dependent RNA helicase DBP5
2gxq[12] B AMP
ADENOSINE MONOPHOSPHATE[23 atoms]
A 69.2
/37.1
13
/13
O07897_THETH heat resistant RNA dependent ATPase
2i4i[1] B AMP
ADENOSINE MONOPHOSPHATE[23 atoms]
A 0.0
/35.1
1
/14
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
2vso[7] E AMP
ADENOSINE MONOPHOSPHATE[23 atoms]
A 75.0
/36.5
8
/11
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A
3ber[1] C AMP
ADENOSINE MONOPHOSPHATE[23 atoms]
A 85.7
/39.2
14
/14
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47
5elx[1] C M2A
[(2~{R},3~{R},4~{R},5~{S})-2-(6-aminopurin-9-yl)-4..
A 55.6
/34.7
18
/18
DBP5_YEAS7 ATP-dependent RNA helicase DBP5
7liu[2] F 08T
[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxi..
A 85.7
/34.7
7
/19
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
6cz5[1] B FPJ
5'-O-[(R)-hydroxy(propanoylamino)phosphoryl]adenos..
A 50.0
/34.2
8
/8
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
5zc9[1] E RCG
(1R,2R,3S,3aR,8bS)-6,8-dimethoxy-3a-(4-methoxyphen..
A 40.0
/33.9
5
/5
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
6xki[1] E V6D
(3S,6Z,8E,11S,15R)-15-amino-3-[(1E,3E,5E)-7-(dimet..
A 44.4
/33.9
9
/9
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
5zbz[1] B SAU
13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-..
A 50.0
/33.9
6
/6
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
2db3[4] J ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
E 85.7
/33.8
7
/23
VASA_DROME ATP-dependent RNA helicase vasa
2hyi[7] L ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
E 55.0
/34.4
20
/20
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48
3b7g[6] C ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
A 50.0
/35.9
10
/13
DDX20_HUMAN Probable ATP-dependent RNA helicase DDX20
3g0h[1] C ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
A 81.8
/35.0
11
/17
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3i5x[2] C ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
A 63.2
/36.0
19
/19
MS116_YEAST ATP-dependent RNA helicase MSS116
4d25[6] C ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
A 81.2
/36.5
16
/22
O01378_BOMMO BMVLG PROTEIN
4w7s[1] I ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
B 58.3
/31.9
12
/12
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
5zc9[1] C ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
A 53.3
/33.9
15
/20
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
6l5n[2] E ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
A 68.4
/34.5
19
/21
DDX21_HUMAN Nucleolar RNA helicase 2
6l5n[1] H ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
B 25.0
/34.5
4
/5
DDX21_HUMAN Nucleolar RNA helicase 2
6xki[7] C ANP
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER[31 ato..
A 50.0
/33.9
16
/23
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
5suq[2] G KEG
12-TUNGSTOPHOSPHATE[53 atoms]
A 50.0
/32.0
8
/8
SUB2_YEAST ATP-dependent RNA helicase SUB2
5suq[1] H KEG
12-TUNGSTOPHOSPHATE[53 atoms]
A 33.3
/32.0
3
/3
SUB2_YEAST ATP-dependent RNA helicase SUB2
5suq[1] I KEG
12-TUNGSTOPHOSPHATE[53 atoms]
A 100.0
/32.0
4
/4
SUB2_YEAST ATP-dependent RNA helicase SUB2
5suq[1] H KEG
12-TUNGSTOPHOSPHATE[53 atoms]
C 25.0
/32.0
4
/7
SUB2_YEAST ATP-dependent RNA helicase SUB2
5suq[1] I KEG
12-TUNGSTOPHOSPHATE[53 atoms]
C 50.0
/32.0
6
/6
SUB2_YEAST ATP-dependent RNA helicase SUB2
6qdv[1] JB ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms]
D 55.0
/34.4
20
/20
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6yxx[2] ID ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms]
Q 58.8
/34.4
17
/23
D0A9G9_TRYB9 DEAD-box helicase, putative
7u9q[55] K ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms]
B 0.0
/25.1
1
/5
RYR2_HUMAN Ryanodine receptor 2
8c6j[1] TB ATP
ADENOSINE-5'-TRIPHOSPHATE[31 atoms]
E 50.0
/34.4
18
/18
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
8uq3[6] L KVR
4-[(7-methoxy-2,3-dihydro-1,4-benzothiazepin-4(5H)..
A 0.0
/25.1
1
/4
RYR2_HUMAN Ryanodine receptor 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
740 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1fuk[1] B ZN
ZINC ION[1 atoms]
A 33.3
/42.6
3
/3
IF4A_YEAST EUKARYOTIC INITIATION FACTOR 4A
1vec[1] C ZN
ZINC ION[1 atoms]
A 50.0
/39.3
2
/2
DDX6_HUMAN ATP-dependent RNA helicase p54
1vec[1] C ZN
ZINC ION[1 atoms]
B 0.0
/39.3
1
/1
DDX6_HUMAN ATP-dependent RNA helicase p54
2rb4[1] F ZN
ZINC ION[1 atoms]
A 50.0
/41.7
2
/2
DDX25_HUMAN ATP-dependent RNA helicase DDX25
8tbx[1] D ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
DDX1_HUMAN DDX1_HUMAN ATP-dependent RNA helicase DDX1
1xtj[11] B MG
MAGNESIUM ION[1 atoms]
A 100.0
/33.5
4
/4
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
2db3[9] I MG
MAGNESIUM ION[1 atoms]
E 100.0
/33.8
2
/2
VASA_DROME ATP-dependent RNA helicase vasa
2hyi[11] K MG
MAGNESIUM ION[1 atoms]
E 100.0
/34.4
3
/3
DDX48_HUMAN Probable ATP-dependent RNA helicase DDX48
2pl3[1] B MG
MAGNESIUM ION[1 atoms]
A 100.0
/38.9
1
/1
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10
3fht[2] E MG
MAGNESIUM ION[1 atoms]
A 100.0
/35.0
2
/3
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3i5x[4] D MG
MAGNESIUM ION[1 atoms]
A 100.0
/36.0
3
/3
MS116_YEAST ATP-dependent RNA helicase MSS116
3ly5[6] D MG
MAGNESIUM ION[1 atoms]
A 50.0
/38.5
2
/2
DDX18_HUMAN ATP-dependent RNA helicase DDX18
3ly5[1] E MG
MAGNESIUM ION[1 atoms]
A 83.3
/38.5
6
/6
DDX18_HUMAN ATP-dependent RNA helicase DDX18
3pew[2] G MG
MAGNESIUM ION[1 atoms]
A 0.0
/35.0
1
/1
DBP5_YEAST ATP-dependent RNA helicase DBP5
3pey[1] G MG
MAGNESIUM ION[1 atoms]
A 0.0
/34.7
1
/1
DBP5_YEAST ATP-dependent RNA helicase DBP5
3sqw[6] D MG
MAGNESIUM ION[1 atoms]
A 100.0
/36.0
2
/2
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4ct4[3] E MG
MAGNESIUM ION[1 atoms]
B 100.0
/36.0
3
/3
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
4ct4[1] H MG
MAGNESIUM ION[1 atoms]
D 25.0
/35.9
4
/4
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
4d25[2] D MG
MAGNESIUM ION[1 atoms]
A 66.7
/36.5
3
/3
O01378_BOMMO BMVLG PROTEIN
4tyn[1] C MG
MAGNESIUM ION[1 atoms]
B 100.0
/36.0
5
/5
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4tyw[1] D MG
MAGNESIUM ION[1 atoms]
A 42.9
/36.0
7
/7
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
5dtu[1] C MG
MAGNESIUM ION[1 atoms]
A 100.0
/32.6
4
/4
G0SBQ7_CHATD Prp28
5elx[3] D MG
MAGNESIUM ION[1 atoms]
A 100.0
/34.7
3
/3
DBP5_YEAS7 ATP-dependent RNA helicase DBP5
5elx[1] H MG
MAGNESIUM ION[1 atoms]
A 0.0
/34.7
1
/1
DBP5_YEAS7 ATP-dependent RNA helicase DBP5
5zc9[1] D MG
MAGNESIUM ION[1 atoms]
A 66.7
/33.9
3
/3
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
6b4j[4] K MG
MAGNESIUM ION[1 atoms]
E 100.0
/34.7
2
/4
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
6l5l[1] B MG
MAGNESIUM ION[1 atoms]
A 0.0
/34.9
1
/1
DDX21_HUMAN Nucleolar RNA helicase 2
6l5n[1] J MG
MAGNESIUM ION[1 atoms]
B 0.0
/34.5
1
/1
DDX21_HUMAN Nucleolar RNA helicase 2
6qdv[2] IB MG
MAGNESIUM ION[1 atoms]
D 100.0
/34.4
3
/3
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
6uv0[1] C MG
MAGNESIUM ION[1 atoms]
A 100.0
/37.2
1
/1
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv1[13] H MG
MAGNESIUM ION[1 atoms]
A 0.0
/38.0
2
/2
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv1[1] J MG
MAGNESIUM ION[1 atoms]
A 50.0
/38.0
2
/3
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv1[1] P MG
MAGNESIUM ION[1 atoms]
B 25.0
/38.0
4
/4
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv2[2] F MG
MAGNESIUM ION[1 atoms]
A 25.0
/38.0
4
/4
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6uv2[1] H MG
MAGNESIUM ION[1 atoms]
A 0.0
/38.0
3
/3
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
6xki[7] D MG
MAGNESIUM ION[1 atoms]
A 50.0
/33.9
2
/2
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
7aoi[1] LC MG
MAGNESIUM ION[1 atoms]
NB 100.0
/35.6
1
/2
D0A9G9_TRYB9 DEAD-box helicase, putative,mt-LAF2
8arp[3] I MG
MAGNESIUM ION[1 atoms]
A 100.0
/38.5
3
/3
DBP2_YEAST ATP-dependent RNA helicase DBP2
8c6j[1] SB MG
MAGNESIUM ION[1 atoms]
E 83.3
/34.4
6
/6
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
8fkv[4] OD MG
MAGNESIUM ION[1 atoms]
CA 100.0
/34.9
1
/1
DDX54_HUMAN ATP-dependent RNA helicase DDX54
8i9z[2] LB MG
MAGNESIUM ION[1 atoms]
Y 100.0
/36.9
1
/1
G0RYG4_CHATD ATP-dependent RNA helicase
2gxs[2] C CA
CALCIUM ION[1 atoms]
A 33.3
/37.1
3
/3
O07897_THETH heat resistant RNA dependent ATPase
2gxs[2] E CA
CALCIUM ION[1 atoms]
A 100.0
/37.1
3
/3
O07897_THETH heat resistant RNA dependent ATPase
4kbf[1] D NA
SODIUM ION[1 atoms]
A 0.0
/37.1
3
/3
Q72GF3_THET2 Heat resistant RNA dependent ATPase
4kbf[1] E NA
SODIUM ION[1 atoms]
A 33.3
/37.1
3
/3
Q72GF3_THET2 Heat resistant RNA dependent ATPase
2rb4[2] C CL
CHLORIDE ION[1 atoms]
A 100.0
/41.7
1
/1
DDX25_HUMAN ATP-dependent RNA helicase DDX25
2rb4[1] D CL
CHLORIDE ION[1 atoms]
A 50.0
/41.7
2
/2
DDX25_HUMAN ATP-dependent RNA helicase DDX25
3eaq[1] C CL
CHLORIDE ION[1 atoms]
A 100.0
/42.5
3
/3
Q72GF3_THET2 Heat resistant RNA dependent ATPase
3eaq[1] D CL
CHLORIDE ION[1 atoms]
B 0.0
/41.9
1
/3
Q72GF3_THET2 Heat resistant RNA dependent ATPase
3fe2[1] E CL
CHLORIDE ION[1 atoms]
B 0.0
/37.1
2
/3
DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5
3iuy[1] F CL
CHLORIDE ION[1 atoms]
B 0.0
/38.8
1
/1
DDX53_HUMAN Probable ATP-dependent RNA helicase DDX53
4ct4[1] I CL
CHLORIDE ION[1 atoms]
D 60.0
/35.9
5
/5
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
6o5f[2] E CL
CHLORIDE ION[1 atoms]
A 100.0
/34.4
4
/4
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
6o5f[2] F CL
CHLORIDE ION[1 atoms]
A 0.0
/34.4
3
/3
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
6o5f[2] G CL
CHLORIDE ION[1 atoms]
A 33.3
/34.4
6
/7
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
4nho[1] J HG
MERCURY (II) ION[1 atoms]
A 16.7
/34.4
6
/6
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
4lk2[1] C NI
NICKEL (II) ION[1 atoms]
A 0.0
/32.2
1
/3
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP..
5vsn[1] C K
POTASSIUM ION[1 atoms]
A 0.0
/29.8
1
/2
RYR2_MOUSE Ryanodine receptor 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
OTHERPOLY
740 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
4db4[2] C 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. A 100.0
/38.7
6
/11
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4db4[2] E 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. A 50.0
/38.7
4
/4
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
7liu[2] C 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. A 65.4
/34.7
26
/26
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
7liu[1] D 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C.. A 0.0
/34.7
1
/1
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
740 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6f9s[2] A DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6[167 aa] A 17.6
/39.6
17
/17
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6
1vec[1] B DDX6_HUMAN ATP-dependent RNA helicase p54[206 aa] A 14.3
/39.3
7
/8
DDX6_HUMAN ATP-dependent RNA helicase p54
1vec[1] A DDX6_HUMAN ATP-dependent RNA helicase p54[206 aa] B 25.0
/39.3
8
/8
DDX6_HUMAN ATP-dependent RNA helicase p54
2zu6[1] D IF4A1_HUMAN Eukaryotic initiation factor 4A-I[345 aa] F 0.0
/39.0
1
/1
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
8arp[6] B DBP2_YEAST ATP-dependent RNA helicase DBP2[444 aa] A 20.0
/38.5
5
/12
DBP2_YEAST ATP-dependent RNA helicase DBP2
8arp[6] C DBP2_YEAST ATP-dependent RNA helicase DBP2[445 aa] A 33.3
/38.5
3
/4
DBP2_YEAST ATP-dependent RNA helicase DBP2
8arp[6] D DBP2_YEAST ATP-dependent RNA helicase DBP2[444 aa] A 13.3
/38.5
15
/20
DBP2_YEAST ATP-dependent RNA helicase DBP2
8arp[6] F DBP2_YEAST ATP-dependent RNA helicase DBP2[443 aa] A 9.1
/38.5
11
/11
DBP2_YEAST ATP-dependent RNA helicase DBP2
7dtk[2] B CGH1_CAEEL ATP-dependent RNA helicase cgh-1[203 aa] A 0.0
/37.7
9
/9
CGH1_CAEEL ATP-dependent RNA helicase cgh-1
1wrb[2] B O97032_DUGJA DjVLGB[232 aa] A 37.5
/37.2
24
/33
O97032_DUGJA DjVLGB
4kbf[3] B Q72GF3_THET2 Heat resistant RNA dependent ATPase[365 aa] A 26.7
/37.1
15
/16
Q72GF3_THET2 Heat resistant RNA dependent ATPase
2gxq[17] A O07897_THETH heat resistant RNA dependent ATPase[207 aa] A 23.1
/37.1
13
/14
O07897_THETH heat resistant RNA dependent ATPase
2vsx[2] B IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A[366 aa] A 36.4
/36.5
22
/22
IF4A_YEAST ATP-DEPENDENT RNA HELICASE EIF4A
1hv8[2] B H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669[363 aa].. A 0.0
/36.2
10
/10
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669
7pli[6] C DBPA_ECOLI ATP-dependent RNA helicase DbpA[456 aa] A 0.0
/36.5
9
/18
DBPA_ECOLI ATP-dependent RNA helicase DbpA
1fuu[1] A IF4A_YEAST YEAST INITIATION FACTOR 4A[215 aa] B 60.0
/36.0
5
/5
IF4A_YEAST YEAST INITIATION FACTOR 4A
1t6n[2] B UAP56_HUMAN Probable ATP-dependent RNA helicase[207 aa] A 33.3
/35.1
15
/16
UAP56_HUMAN Probable ATP-dependent RNA helicase
6o5f[2] B DDX3X_HUMAN ATP-dependent RNA helicase DDX3X[417 aa] A 0.0
/34.4
4
/7
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
7liu[2] B DDX3X_HUMAN ATP-dependent RNA helicase DDX3X[442 aa] A 25.0
/34.7
12
/12
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
2zu6[1] F IF4A1_HUMAN Eukaryotic initiation factor 4A-I[271 aa] D 100.0
/33.9
1
/1
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
3fho[2] B DBP5_SCHPO ATP-dependent RNA helicase dbp5[306 aa] A 33.3
/35.6
3
/16
DBP5_SCHPO ATP-dependent RNA helicase dbp5
5suq[2] C SUB2_YEAST ATP-dependent RNA helicase SUB2[374 aa] A 36.4
/32.0
11
/12
SUB2_YEAST ATP-dependent RNA helicase SUB2
4w7s[2] B PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28.. A 40.0
/32.0
15
/20
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
4p9l[2] A RYR2_MOUSE Ryanodine receptor 2[164 aa] A 66.7
/29.9
3
/19
RYR2_MOUSE Ryanodine receptor 2
8dvv[4] B RYR2_MOUSE Ryanodine receptor 2[3886 aa] A 0.0
/29.8
1
/40
RYR2_MOUSE Ryanodine receptor 2
8dtz[4] D RYR2_MOUSE Ryanodine receptor 2[4061 aa] A 0.0
/26.0
1
/63
RYR2_MOUSE Ryanodine receptor 2
7u9q[15] F RYR2_HUMAN Ryanodine receptor 2[4224 aa] B 0.0
/25.1
1
/106
RYR2_HUMAN Ryanodine receptor 2
7u9z[4] H RYR2_HUMAN Ryanodine receptor 2[4226 aa] A 0.0
/25.1
1
/67
RYR2_HUMAN Ryanodine receptor 2
7ua1[4] H RYR2_HUMAN Ryanodine receptor 2[4224 aa] A 0.0
/25.1
3
/102
RYR2_HUMAN Ryanodine receptor 2
7ua3[4] L RYR2_HUMAN Ryanodine receptor 2[4443 aa] A 16.7
/25.1
6
/107
RYR2_HUMAN Ryanodine receptor 2
7ua4[4] L RYR2_HUMAN Ryanodine receptor 2[4369 aa] A 50.0
/25.1
2
/56
RYR2_HUMAN Ryanodine receptor 2
8uxe[4] H RYR2_HUMAN Ryanodine receptor 2[4224 aa] E 0.0
/25.1
1
/98
RYR2_HUMAN Ryanodine receptor 2
8uxg[1] G RYR2_HUMAN Ryanodine receptor 2[4224 aa] H 0.0
/25.1
1
/95
RYR2_HUMAN Ryanodine receptor 2
8uxh[2] A RYR2_HUMAN Ryanodine receptor 2[4004 aa] F 0.0
/25.1
1
/81
RYR2_HUMAN Ryanodine receptor 2
8uxm[2] L RYR2_HUMAN Ryanodine receptor 2[4231 aa] B 0.0
/25.1
1
/74
RYR2_HUMAN Ryanodine receptor 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
740 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1vec[2] D TLA
L(+)-TARTARIC ACID[10 atoms]
B 83.3
/39.3
6
/6
DDX6_HUMAN ATP-dependent RNA helicase p54
2pl3[1] D EOH
ETHANOL[3 atoms]
A 66.7
/38.9
3
/3
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10
2pl3[1] E EOH
ETHANOL[3 atoms]
A 0.0
/38.9
1
/1
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10
2pl3[1] G EOH
ETHANOL[3 atoms]
A 50.0
/38.9
6
/6
DDX10_HUMAN Probable ATP-dependent RNA helicase DDX10
3ly5[2] F SCN
THIOCYANATE ION[3 atoms]
A 75.0
/38.5
4
/4
DDX18_HUMAN ATP-dependent RNA helicase DDX18
1hv8[2] C SO4
SULFATE ION[5 atoms]
A 100.0
/36.2
5
/5
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669
1hv8[1] D SO4
SULFATE ION[5 atoms]
A 0.0
/36.2
3
/3
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669
1hv8[2] E SO4
SULFATE ION[5 atoms]
A 50.0
/36.2
4
/5
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669
1hv8[2] F SO4
SULFATE ION[5 atoms]
A 33.3
/36.2
3
/3
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669
1hv8[2] G SO4
SULFATE ION[5 atoms]
A 0.0
/36.2
1
/1
H669_METJA PUTATIVE ATP-DEPENDENT RNA HELICASE MJ0669
1qde[1] B SO4
SULFATE ION[5 atoms]
A 66.7
/37.8
6
/6
IF4A_YEAST TRANSLATION INITIATION FACTOR 4A
1wrb[3] C SO4
SULFATE ION[5 atoms]
A 85.7
/37.2
7
/7
O97032_DUGJA DjVLGB
1wrb[14] D SO4
SULFATE ION[5 atoms]
A 100.0
/37.2
1
/1
O97032_DUGJA DjVLGB
2rb4[2] E SO4
SULFATE ION[5 atoms]
A 0.0
/41.7
2
/2
DDX25_HUMAN ATP-dependent RNA helicase DDX25
3fe2[2] C SO4
SULFATE ION[5 atoms]
A 83.3
/37.1
6
/6
DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5
3fe2[1] G SO4
SULFATE ION[5 atoms]
B 0.0
/37.1
3
/3
DDX5_HUMAN Probable ATP-dependent RNA helicase DDX5
3mwj[11] C SO4
SULFATE ION[5 atoms]
A 85.7
/36.7
7
/7
Q72GF3_THET2 Heat resistant RNA dependent ATPase
3mwj[3] D SO4
SULFATE ION[5 atoms]
A 0.0
/36.7
2
/2
Q72GF3_THET2 Heat resistant RNA dependent ATPase
4kbg[2] D SO4
SULFATE ION[5 atoms]
A 0.0
/37.1
7
/7
Q72GF3_THET2 Heat resistant RNA dependent ATPase
4nho[1] F SO4
SULFATE ION[5 atoms]
A 100.0
/34.4
2
/3
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
6f9s[2] D SO4
SULFATE ION[5 atoms]
A 25.0
/39.6
4
/4
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6
7ddx[1] F SO4
SULFATE ION[5 atoms]
B 0.0
/32.8
2
/2
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
7ddx[1] G SO4
SULFATE ION[5 atoms]
B 80.0
/32.8
5
/5
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
7ddx[1] H SO4
SULFATE ION[5 atoms]
B 80.0
/32.8
5
/5
IF4A1_MOUSE Eukaryotic initiation factor 4A-I
8arp[6] H SO4
SULFATE ION[5 atoms]
A 0.0
/38.5
1
/1
DBP2_YEAST ATP-dependent RNA helicase DBP2
8arp[5] W SO4
SULFATE ION[5 atoms]
A 0.0
/38.5
1
/1
DBP2_YEAST ATP-dependent RNA helicase DBP2
8arp[1] S SO4
SULFATE ION[5 atoms]
E 100.0
/38.5
4
/4
DBP2_YEAST ATP-dependent RNA helicase DBP2
8arp[1] T SO4
SULFATE ION[5 atoms]
E 0.0
/38.5
2
/2
DBP2_YEAST ATP-dependent RNA helicase DBP2
2gxs[1] J GOL
GLYCEROL[6 atoms]
B 80.0
/37.1
5
/5
O07897_THETH heat resistant RNA dependent ATPase
2way[3] E GOL
GLYCEROL[6 atoms]
A 0.0
/38.3
5
/5
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
2way[1] F GOL
GLYCEROL[6 atoms]
A 0.0
/38.3
3
/6
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
2way[2] G GOL
GLYCEROL[6 atoms]
A 25.0
/38.3
4
/5
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
3fht[2] F GOL
GLYCEROL[6 atoms]
A 14.3
/35.0
7
/9
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3fht[1] J GOL
GLYCEROL[6 atoms]
B 50.0
/35.7
6
/6
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3fht[1] K GOL
GLYCEROL[6 atoms]
B 50.0
/35.7
2
/2
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3g0h[1] E GOL
GLYCEROL[6 atoms]
A 20.0
/35.0
5
/7
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
3peu[4] D GOL
GLYCEROL[6 atoms]
A 57.1
/46.0
7
/7
DBP5_YEAST ATP-dependent RNA helicase DBP5
3pey[1] K GOL
GLYCEROL[6 atoms]
A 0.0
/34.7
4
/4
DBP5_YEAST ATP-dependent RNA helicase DBP5
4c9b[1] E GOL
GLYCEROL[6 atoms]
A 100.0
/34.0
1
/1
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4c9b[1] F GOL
GLYCEROL[6 atoms]
A 0.0
/34.0
4
/4
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4c9b[1] G GOL
GLYCEROL[6 atoms]
A 71.4
/34.0
7
/7
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4c9b[1] H GOL
GLYCEROL[6 atoms]
A 0.0
/34.0
3
/3
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4c9b[1] I GOL
GLYCEROL[6 atoms]
A 0.0
/34.0
4
/4
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4c9b[1] J GOL
GLYCEROL[6 atoms]
A 66.7
/34.0
6
/6
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4c9b[1] K GOL
GLYCEROL[6 atoms]
A 40.0
/34.0
5
/5
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4crw[1] C GOL
GLYCEROL[6 atoms]
B 50.0
/39.6
2
/2
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
4crw[1] G GOL
GLYCEROL[6 atoms]
B 0.0
/39.6
5
/5
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
4crw[1] H GOL
GLYCEROL[6 atoms]
B 20.0
/39.6
5
/6
DDX6_HUMAN PROBABLE ATP-DEPENDENT RNA HELICASE DDX6
4d25[1] E GOL
GLYCEROL[6 atoms]
A 33.3
/36.5
3
/3
O01378_BOMMO BMVLG PROTEIN
4nho[1] G GOL
GLYCEROL[6 atoms]
A 33.3
/34.4
6
/6
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
4nho[1] H GOL
GLYCEROL[6 atoms]
A 0.0
/34.4
1
/4
DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23
4w7s[1] H GOL
GLYCEROL[6 atoms]
A 0.0
/32.0
2
/2
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
5vsn[1] B GOL
GLYCEROL[6 atoms]
A 0.0
/29.8
3
/3
RYR2_MOUSE Ryanodine receptor 2
6l5o[1] D GOL
GLYCEROL[6 atoms]
A 50.0
/35.0
2
/5
DDX21_HUMAN Nucleolar RNA helicase 2
7dtk[1] D GOL
GLYCEROL[6 atoms]
A 0.0
/37.7
3
/3
CGH1_CAEEL ATP-dependent RNA helicase cgh-1
7dtk[1] D GOL
GLYCEROL[6 atoms]
B 33.3
/37.7
3
/3
CGH1_CAEEL ATP-dependent RNA helicase cgh-1
7dtk[1] E GOL
GLYCEROL[6 atoms]
B 0.0
/37.7
5
/5
CGH1_CAEEL ATP-dependent RNA helicase cgh-1
2gxq[4] C TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms]
A 0.0
/37.1
4
/4
O07897_THETH heat resistant RNA dependent ATPase
3i62[1] D ALF
TETRAFLUOROALUMINATE ION[5 atoms]
A 100.0
/36.0
8
/8
MS116_YEAST ATP-dependent RNA helicase MSS116
4brw[1] C MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms]
A 0.0
/35.5
5
/5
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1
4brw[1] D 1PE
PENTAETHYLENE GLYCOL[16 atoms]
A 50.0
/35.5
8
/9
DHH1_YEAST ATP-DEPENDENT RNA HELICASE DHH1
1t6n[2] C FLC
CITRATE ANION[13 atoms]
A 57.1
/35.1
7
/7
UAP56_HUMAN Probable ATP-dependent RNA helicase
4ct5[2] C ACT
ACETATE ION[4 atoms]
A 25.0
/36.0
4
/4
DDX6_HUMAN DDX6
6s8r[1] C ACT
ACETATE ION[4 atoms]
A 50.0
/34.9
2
/2
DDX6_DROME ATP-dependent RNA helicase me31b
6s8r[1] E ACT
ACETATE ION[4 atoms]
A 0.0
/34.9
1
/3
DDX6_DROME ATP-dependent RNA helicase me31b
6s8r[1] F ACT
ACETATE ION[4 atoms]
A 50.0
/34.9
2
/3
DDX6_DROME ATP-dependent RNA helicase me31b
3pew[3] H NO3
NITRATE ION[4 atoms]
A 25.0
/35.0
4
/4
DBP5_YEAST ATP-dependent RNA helicase DBP5
3pew[1] I NO3
NITRATE ION[4 atoms]
A 20.0
/35.0
5
/5
DBP5_YEAST ATP-dependent RNA helicase DBP5
3pew[2] K NO3
NITRATE ION[4 atoms]
A 33.3
/35.0
3
/3
DBP5_YEAST ATP-dependent RNA helicase DBP5
3pew[2] L NO3
NITRATE ION[4 atoms]
A 0.0
/35.0
1
/1
DBP5_YEAST ATP-dependent RNA helicase DBP5
3pey[1] I NO3
NITRATE ION[4 atoms]
A 0.0
/34.7
2
/2
DBP5_YEAST ATP-dependent RNA helicase DBP5
5elx[1] G NO3
NITRATE ION[4 atoms]
A 25.0
/34.7
4
/4
DBP5_YEAS7 ATP-dependent RNA helicase DBP5
3ex7[2] L AF3
ALUMINUM FLUORIDE[4 atoms]
C 87.5
/34.4
8
/8
IF4A3_HUMAN Eukaryotic initiation factor 4A-III
5zbz[1] C MLI
MALONATE ION[7 atoms]
A 57.1
/33.9
7
/7
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
6b4k[2] E MLI
MALONATE ION[7 atoms]
A 42.9
/35.1
7
/7
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
6b4k[1] F MLI
MALONATE ION[7 atoms]
A 75.0
/35.1
4
/4
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
1xtk[1] B BME
BETA-MERCAPTOETHANOL[4 atoms]
A 50.0
/34.1
2
/2
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
1xtj[1] D ACY
ACETIC ACID[4 atoms]
A 33.3
/33.5
3
/4
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
2zu6[1] I ACY
ACETIC ACID[4 atoms]
A 0.0
/33.5
1
/1
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
2zu6[1] K ACY
ACETIC ACID[4 atoms]
D 50.0
/33.9
2
/2
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
1xti[1] B IPA
ISOPROPYL ALCOHOL[4 atoms]
A 37.5
/33.8
8
/8
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
1xti[1] C IPA
ISOPROPYL ALCOHOL[4 atoms]
A 33.3
/33.8
3
/6
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
1xti[1] D IPA
ISOPROPYL ALCOHOL[4 atoms]
A 66.7
/33.8
3
/3
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
1xti[1] E IPA
ISOPROPYL ALCOHOL[4 atoms]
A 75.0
/33.8
4
/4
UAP56_HUMAN Probable ATP-dependent RNA helicase p47
3i61[1] D BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
A 100.0
/36.0
7
/7
MS116_YEAST ATP-dependent RNA helicase MSS116
3pew[4] E BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
A 87.5
/35.0
8
/8
DBP5_YEAST ATP-dependent RNA helicase DBP5
4tyn[4] D BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
B 100.0
/36.0
5
/5
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
4tyw[1] E BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
A 100.0
/36.0
8
/8
MS116_YEAST ATP-dependent RNA helicase MSS116, mitochondrial
5elx[1] E BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
A 87.5
/34.7
8
/8
DBP5_YEAS7 ATP-dependent RNA helicase DBP5
5sup[3] K BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
A 77.8
/31.8
9
/9
SUB2_YEAST ATP-dependent RNA helicase SUB2
6uv1[5] F BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
A 100.0
/38.0
8
/8
DDX17_HUMAN Probable ATP-dependent RNA helicase DDX17
7pli[12] N BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms]
A 100.0
/36.5
7
/7
DBPA_ECOLI ATP-dependent RNA helicase DbpA
2gxu[2] B PO4
PHOSPHATE ION[5 atoms]
A 83.3
/37.1
6
/6
O07897_THETH heat resistant RNA dependent ATPase
2wax[2] H PO4
PHOSPHATE ION[5 atoms]
A 50.0
/39.6
4
/4
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
2wax[4] I PO4
PHOSPHATE ION[5 atoms]
A 0.0
/39.6
4
/4
DDX6_HUMAN ATP-DEPENDENT RNA HELICASE DDX6
3ber[5] B PO4
PHOSPHATE ION[5 atoms]
A 100.0
/39.2
4
/4
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47
3ly5[1] C PO4
PHOSPHATE ION[5 atoms]
A 100.0
/38.5
6
/6
DDX18_HUMAN ATP-dependent RNA helicase DDX18
4c9b[1] C PO4
PHOSPHATE ION[5 atoms]
A 66.7
/34.0
6
/6
IF4A3_HUMAN EUKARYOTIC INITIATION FACTOR 4A-III
4d26[1] D PO4
PHOSPHATE ION[5 atoms]
A 88.9
/36.5
9
/9
O01378_BOMMO BMVLG PROTEIN
4pxa[3] C PO4
PHOSPHATE ION[5 atoms]
A 71.4
/34.7
7
/7
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
4pxa[1] G PO4
PHOSPHATE ION[5 atoms]
A 0.0
/34.7
3
/4
DDX3X_HUMAN ATP-dependent RNA helicase DDX3X
6b4i[4] J PO4
PHOSPHATE ION[5 atoms]
E 75.0
/34.7
4
/5
DD19B_HUMAN ATP-dependent RNA helicase DDX19B
6s8s[2] G PO4
PHOSPHATE ION[5 atoms]
A 0.0
/39.6
4
/4
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6
6s8s[1] H PO4
PHOSPHATE ION[5 atoms]
A 0.0
/39.6
1
/3
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6
6s8s[1] I PO4
PHOSPHATE ION[5 atoms]
A 33.3
/39.6
6
/6
DDX6_HUMAN Probable ATP-dependent RNA helicase DDX6
7pmq[3] U PO4
PHOSPHATE ION[5 atoms]
A 0.0
/36.5
1
/1
W8TF60_ECOLX ATP-dependent RNA helicase DbpA
8iju[1] C PO4
PHOSPHATE ION[5 atoms]
A 62.5
/32.8
8
/8
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] D PO4
PHOSPHATE ION[5 atoms]
A 33.3
/32.8
6
/6
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
2zu6[1] G EDO
1,2-ETHANEDIOL[4 atoms]
A 33.3
/33.5
3
/3
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
2zu6[1] H EDO
1,2-ETHANEDIOL[4 atoms]
A 60.0
/33.5
10
/10
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
2zu6[1] J EDO
1,2-ETHANEDIOL[4 atoms]
D 50.0
/33.9
4
/4
IF4A1_HUMAN Eukaryotic initiation factor 4A-I
8iju[2] E EDO
1,2-ETHANEDIOL[4 atoms]
A 20.0
/32.8
5
/5
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] F EDO
1,2-ETHANEDIOL[4 atoms]
A 100.0
/32.8
3
/3
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] G EDO
1,2-ETHANEDIOL[4 atoms]
A 50.0
/32.8
4
/4
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] H EDO
1,2-ETHANEDIOL[4 atoms]
A 25.0
/32.8
4
/7
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[2] I EDO
1,2-ETHANEDIOL[4 atoms]
A 37.5
/32.8
8
/8
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] K EDO
1,2-ETHANEDIOL[4 atoms]
A 0.0
/32.8
4
/4
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] L EDO
1,2-ETHANEDIOL[4 atoms]
A 66.7
/32.8
3
/3
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] M EDO
1,2-ETHANEDIOL[4 atoms]
A 33.3
/32.8
6
/6
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] N EDO
1,2-ETHANEDIOL[4 atoms]
A 33.3
/32.8
3
/4
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] O EDO
1,2-ETHANEDIOL[4 atoms]
A 33.3
/32.8
3
/5
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] P EDO
1,2-ETHANEDIOL[4 atoms]
A 0.0
/32.8
2
/2
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] Q EDO
1,2-ETHANEDIOL[4 atoms]
A 20.0
/32.8
5
/5
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] R EDO
1,2-ETHANEDIOL[4 atoms]
A 0.0
/32.8
1
/1
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] S EDO
1,2-ETHANEDIOL[4 atoms]
A 0.0
/32.8
2
/3
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
8iju[1] T EDO
1,2-ETHANEDIOL[4 atoms]
A 0.0
/32.8
1
/2
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
3ber[1] D PGE
TRIETHYLENE GLYCOL[10 atoms]
A 42.9
/39.2
7
/7
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47
3ber[1] E PGE
TRIETHYLENE GLYCOL[10 atoms]
A 33.3
/39.2
3
/8
DDX47_HUMAN Probable ATP-dependent RNA helicase DDX47
8iju[1] B PGE
TRIETHYLENE GLYCOL[10 atoms]
A 44.4
/32.8
9
/9
DX39A_HUMAN ATP-dependent RNA helicase DDX39A
4ljy[1] D MRD
(4R)-2-METHYLPENTANE-2,4-DIOL[8 atoms]
A 0.0
/32.3
2
/5
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP..
4ljy[1] E MRD
(4R)-2-METHYLPENTANE-2,4-DIOL[8 atoms]
A 0.0
/32.3
2
/3
PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP..
4w7s[2] C P6G
HEXAETHYLENE GLYCOL[13 atoms]
A 0.0
/32.0
5
/7
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
4w7s[1] D P6G
HEXAETHYLENE GLYCOL[7 atoms]
A 0.0
/32.0
3
/4
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
4w7s[1] E P6G
HEXAETHYLENE GLYCOL[7 atoms]
A 40.0
/32.0
5
/5
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
4w7s[2] F P6G
HEXAETHYLENE GLYCOL[12 atoms]
A 0.0
/32.0
2
/7
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
4w7s[1] G P6G
HEXAETHYLENE GLYCOL[10 atoms]
A 33.3
/32.0
3
/3
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
4w7s[1] G P6G
HEXAETHYLENE GLYCOL[10 atoms]
B 20.0
/31.9
5
/5
PRP28_YEAST Pre-mRNA-splicing ATP-dependent RNA helicase PRP28..
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.