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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
7876 932 22 YP_009725307.1()
QUERYSEQ
SADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYN
CCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVN
CLDDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAI
SDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHN
MLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLR
KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHML
DMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQ
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [YP_009725307.1()]

932
region name description
1-932 DISORDER predicted by DISOPRED (1-16,929-932)

MONOMER
932
pdb_id a1 identity[%]2 description
7c2k A 100.0 R1AB_SARS2 RNA-directed RNA polymerase
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
932 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7bv2[20] C R1AB_SARS2 Non-structural protein 7[63 aa] A 100.0
/100.0
14
/14
R1AB_SARS2 RNA-directed RNA polymerase
7bw4[1] C R1AB_SARS2 Non-structural protein 7[65 aa] A 100.0
/100.0
10
/10
R1AB_SARS2 RNA-directed RNA polymerase
7bv1[1] D R1AB_SARS2 Non-structural protein 8[99 aa] A 100.0
/100.0
1
/1
R1AB_SARS2 RNA-directed RNA polymerase
6m71[1] C R1AB_SARS2 Non-structural protein 8[43 aa] A 100.0
/100.0
1
/1
R1AB_SARS2 RNA-directed RNA polymerase
7cyq[1] I R1AB_SARS2 Non-structural protein 9[113 aa] A 100.0
/100.0
19
/19
R1AB_SARS2 RNA-directed RNA polymerase
7aap[2] D R1AB_SARS2 Non-structural protein 8[28 aa] A 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 12
6xqb[1] D R1AB_SARS2 Non-structural protein 8[31 aa] A 100.0
/100.0
1
/1
R1AB_SARS2 RNA-directed RNA polymerase
7cxn[1] H R1AB_SARS2 Helicase[596 aa] A 100.0
/99.9
1
/1
R1AB_SARS2 RNA-directed RNA polymerase
6xez[4] E R1AB_SARS2 Helicase[596 aa] A 100.0
/100.0
3
/3
R1AB_SARS2 RNA-directed RNA polymerase
6xez[6] D R1AB_SARS2 Non-structural protein 8[186 aa] A 100.0
/100.0
12
/12
R1AB_SARS2 RNA-directed RNA polymerase
7d4f[20] A R1AB_SARS2 Non-structural protein 8[114 aa] D 100.0
/100.0
48
/48
R1AB_SARS2 RNA-directed RNA polymerase
7bzf[3] D R1AB_SARS2 Non-structural protein 8[104 aa] A 100.0
/100.0
3
/3
R1AB_SARS2 RNA-directed RNA polymerase
7bw4[1] B R1AB_SARS2 Non-structural protein 8[115 aa] A 100.0
/100.0
42
/42
R1AB_SARS2 RNA-directed RNA polymerase
6nur[1] D R1A_CVHSA NSP8[109 aa] A 100.0
/97.0
2
/2
R1AB_CVHSA NSP12
7l1f[1] B R1AB_SARS2 Non-structural protein 8[114 aa] A 100.0
/100.0
40
/40
R1AB_SARS2 RNA-directed RNA polymerase
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
NUCLEOTIDE
932 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7aap[1] E RNA (5'-R(P*UP*UP*AP*AP*GP*UP*UP*AP*U)-3') A 100.0
/100.0
16
/16
R1AB_SARS2 Non-structural protein 12
7b3c[1] D DNA/RNA (5'-R(P*CP*UP*AP*CP*GP*CP*A)-D(P*(RMP))-R(.. A 100.0
/100.0
16
/16
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
7c2k[1] E RNA (29-MER) A 100.0
/100.0
24
/24
R1AB_SARS2 RNA-directed RNA polymerase
7b3b[1] E RNA (5'-R(P*UP*GP*CP*AP*UP*CP*GP*CP*GP*UP*AP*G)-3'.. A 100.0
/100.0
28
/28
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
6xqb[1] E RNA (5'-R(*GP*UP*GP*GP*GP*CP*CP*CP*A)-3') A 100.0
/100.0
15
/15
R1AB_SARS2 RNA-directed RNA polymerase
7bzf[1] F RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*CP*AP*CP*.. A 100.0
/100.0
13
/13
R1AB_SARS2 RNA-directed RNA polymerase
7bv2[1] D Primer A 100.0
/100.0
15
/15
R1AB_SARS2 RNA-directed RNA polymerase
7cyq[1] E Primer A 100.0
/100.0
16
/16
R1AB_SARS2 RNA-directed RNA polymerase
7bzf[1] E RNA (31-MER) A 100.0
/100.0
25
/25
R1AB_SARS2 RNA-directed RNA polymerase
7cyq[1] F Template A 100.0
/100.0
30
/30
R1AB_SARS2 RNA-directed RNA polymerase
7l1f[1] D RNA (5'-R(P*CP*UP*AP*AP*GP*AP*AP*GP*CP*UP*AP*UP*U*.. A 100.0
/100.0
17
/17
R1AB_SARS2 RNA-directed RNA polymerase
7ctt[1] E Primer-RNA (5'-R(P*UP*UP*CP*UP*CP*CP*UP*AP*AP*GP*A.. A 100.0
/100.0
18
/18
R1AB_SARS2 RNA-directed RNA polymerase
7b3c[1] E RNA (5'-R(P*UP*CP*AP*CP*UP*UP*GP*CP*GP*UP*AP*G)-3'.. A 100.0
/100.0
26
/26
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
7aap[1] F RNA (5'-R(P*UP*UP*CP*AP*UP*AP*AP*CP*UP*UP*AP*A)-3'.. A 100.0
/100.0
23
/23
R1AB_SARS2 Non-structural protein 12
6xqb[1] F RNA (5'-R(*GP*UP*GP*GP*GP*CP*CP*CP*A)-3') A 100.0
/100.0
19
/19
R1AB_SARS2 RNA-directed RNA polymerase
7ctt[1] F Template-RNA (5'-R(P*AP*CP*UP*AP*GP*CP*UP*UP*CP*UP.. A 100.0
/100.0
25
/25
R1AB_SARS2 RNA-directed RNA polymerase
7b3d[1] E RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3'.. A 100.0
/100.0
29
/29
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase nsp12
6yyt[1] E RNA product A 100.0
/100.0
14
/14
R1AB_SARS2 nsp12
7l1f[1] E RNA (5'-R(P*AP*UP*UP*UP*UP*AP*AP*UP*AP*GP*CP*UP*UP.. A 100.0
/100.0
14
/14
R1AB_SARS2 RNA-directed RNA polymerase
7c2k[1] F RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*CP*AP*CP*.. A 100.0
/100.0
17
/17
R1AB_SARS2 RNA-directed RNA polymerase
6yyt[1] G RNA product A 100.0
/100.0
26
/26
R1AB_SARS2 nsp12
7bv2[1] E Templete A 100.0
/100.0
26
/26
R1AB_SARS2 RNA-directed RNA polymerase
7b3d[1] D RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3') A 100.0
/100.0
14
/14
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase nsp12
7b3b[1] D DNA/RNA (5'-R(P*CP*UP*AP*CP*GP*CP*G)-D(P*(RMP))-R(.. A 100.0
/100.0
14
/14
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
6xez[1] G Product RNA A 100.0
/100.0
16
/16
R1AB_SARS2 RNA-directed RNA polymerase
6xez[1] H Template RNA A 100.0
/100.0
21
/21
R1AB_SARS2 RNA-directed RNA polymerase
7cxn[2] E Primer RNA A 100.0
/99.9
9
/9
R1AB_SARS2 RNA-directed RNA polymerase
7cxm[2] F RNA (26-MER) A 100.0
/99.9
23
/23
R1AB_SARS2 RNA-directed RNA polymerase
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
932 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7cyq[1] L GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms]
A 100.0
/100.0
8
/8
R1AB_SARS2 RNA-directed RNA polymerase
6xez[1] U 1N7
CHAPSO[36 atoms]
A 100.0
/100.0
1
/1
R1AB_SARS2 RNA-directed RNA polymerase
6xez[1] M 1N7
CHAPSO[35 atoms]
A 100.0
/100.0
3
/3
R1AB_SARS2 RNA-directed RNA polymerase
6xez[1] N 1N7
CHAPSO[26 atoms]
A 100.0
/100.0
4
/4
R1AB_SARS2 RNA-directed RNA polymerase
7aap[2] M GE6
[[(2~{R},3~{S},4~{R},5~{R})-5-(3-aminocarbonyl-5-f..
A 100.0
/100.0
7
/7
R1AB_SARS2 Non-structural protein 12
6xez[1] L ADP
ADENOSINE-5'-DIPHOSPHATE[27 atoms]
A 100.0
/100.0
11
/11
R1AB_SARS2 RNA-directed RNA polymerase
7bv2[1] K F86
[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,1-..
A 100.0
/100.0
7
/7
R1AB_SARS2 RNA-directed RNA polymerase
7d4f[1] G H3U
8-(3-(3-aminobenzamido)-4-methylbenzamido)naphthal..
D 100.0
/100.0
12
/12
R1AB_SARS2 RNA-directed RNA polymerase
7d4f[1] H H3U
8-(3-(3-aminobenzamido)-4-methylbenzamido)naphthal..
D 100.0
/100.0
12
/12
R1AB_SARS2 RNA-directed RNA polymerase
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
932 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7bv2[2] I MG
MAGNESIUM ION[1 atoms]
A 100.0
/100.0
2
/2
R1AB_SARS2 RNA-directed RNA polymerase
7aap[3] J MG
MAGNESIUM ION[1 atoms]
A 100.0
/100.0
2
/2
R1AB_SARS2 Non-structural protein 12
7bv2[3] J MG
MAGNESIUM ION[1 atoms]
A 100.0
/100.0
1
/1
R1AB_SARS2 RNA-directed RNA polymerase
7c2k[3] G ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_SARS2 RNA-directed RNA polymerase
7bv1[4] E ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_SARS2 RNA-directed RNA polymerase
6nus[3] D ZN
ZINC ION[1 atoms]
A 100.0
/96.6
4
/4
R1AB_CVHSA NSP12
7cxn[8] J ZN
ZINC ION[1 atoms]
A 100.0
/99.9
4
/4
R1AB_SARS2 RNA-directed RNA polymerase
7b3c[4] F ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
7bv1[4] F ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_SARS2 RNA-directed RNA polymerase
7cxn[8] K ZN
ZINC ION[1 atoms]
A 100.0
/99.9
6
/6
R1AB_SARS2 RNA-directed RNA polymerase
7b3c[4] G ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_SARS2 SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
7bw4[1] F ZN
ZINC ION[1 atoms]
A 100.0
/100.0
5
/5
R1AB_SARS2 RNA-directed RNA polymerase
7bw4[1] E ZN
ZINC ION[1 atoms]
A 100.0
/100.0
4
/4
R1AB_SARS2 RNA-directed RNA polymerase
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
932 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7aap[1] K POP
PYROPHOSPHATE 2-[9 atoms]
A 100.0
/100.0
7
/7
R1AB_SARS2 Non-structural protein 12
7bv2[1] H POP
PYROPHOSPHATE 2-[9 atoms]
A 100.0
/100.0
3
/3
R1AB_SARS2 RNA-directed RNA polymerase
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.