Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
884460 | 83 | 87 | YP_009725303.1() | |
QUERYSEQ |
SKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQ |
83 |
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region | name | description |
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1-83 | DISORDER | predicted by DISOPRED |
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83 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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A | 100.0 | R1AB_SARS2 Non-structural protein 7 | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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83 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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E | R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[155 aa] | A | 100.0 /98.6 |
27 /27 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain |
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G | R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[191 aa] | A | 100.0 /98.6 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain |
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H | R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[191 aa] | A | 100.0 /98.6 |
8 /10 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain |
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B | R1AB_SARS2 Non-structural protein 8[115 aa] | A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Non-structural protein 7 |
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D | R1AB_SARS2 Non-structural protein 8[117 aa] | A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 7 |
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A | R1AB_SARS2 RNA-directed RNA polymerase[859 aa] | B | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Non-structural protein 7 |
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C | R1AB_SARS2 Non-structural protein 8[43 aa] | B | 100.0 /100.0 |
20 /20 |
R1AB_SARS2 Non-structural protein 7 |
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E | R1AB_SARS2 Helicase[596 aa] | C | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Non-structural protein 7 |
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E | R1AB_SARS2 Helicase[588 aa] | C | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 7 |
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D | R1AB_SARS2 Non-structural protein 8[31 aa] | C | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 Non-structural protein 7 |
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D | R1AB_SARS2 Non-structural protein 8[28 aa] | C | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 Non-structural protein 7 |
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D | R1AB_SARS2 Non-structural protein 8[99 aa] | C | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Non-structural protein 7 |
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D | R1AB_SARS2 Non-structural protein 8[87 aa] | C | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Non-structural protein 7 |
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B | R1AB_SARS2 SARS-CoV-2 nsp8[81 aa] | C | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 SARS-CoV-2 nsp7 |
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D | R1AB_SARS2 Non-structural protein 8[71 aa] | C | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Non-structural protein 7 |
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A | A0A0U2C263_9ALPC nsp12[899 aa] | C | 78.6 /46.9 |
14 /14 |
A0A0M4AW09_9ALPC nsp7 |
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B | A0A1Z2R8Q6_9ALPC nsp8[114 aa] | C | 33.3 /46.9 |
3 /3 |
A0A0M4AW09_9ALPC nsp7 |
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A | R1AB_FIPV Non-structural protein 6, nsp6,[190 aa] | B | 66.7 /41.5 |
9 /9 |
R1AB_FIPV Non-structural protein 7, nsp7 |
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A | R1AB_FIPV Non-structural protein 6, nsp6,[190 aa] | C | 37.9 /42.3 |
29 /31 |
R1AB_FIPV Non-structural protein 7, nsp7 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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83 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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D | R1AB_CVHSA Replicase polyprotein 1ab, light chain[76 aa] | A | 100.0 /98.6 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain |
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A | R1AB_SARS2 Non-structural protein 7[80 aa] | A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 7 |
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H | R1AB_SARS2 SARS-CoV-2 nsp7[62 aa] | C | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 SARS-CoV-2 nsp7 |
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C | R1AB_FIPV Non-structural protein 7, nsp7[82 aa] | B | 28.6 /41.5 |
14 /14 |
R1AB_FIPV Non-structural protein 7, nsp7 |
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B | R1AB_FIPV Non-structural protein 7, nsp7[82 aa] | C | 66.7 /42.3 |
15 /15 |
R1AB_FIPV Non-structural protein 7, nsp7 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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83 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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E |
EDO
|
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 7 |
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G |
EDO
|
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Non-structural protein 7 |
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G |
EDO
|
C | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 7 |
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E |
ACY
|
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 7 |
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F |
ACY
|
C | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Non-structural protein 7 |
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I |
GOL
|
A | 100.0 /98.6 |
2 /2 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |