Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
4086723 | 83 | 96 | YP_009725303.1() | |
QUERYSEQ |
SKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQ |
83 | region | name | description |
1-83 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
83 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
7lhq | A | 100.0 | R1AB_SARS2 Non-structural protein 7 | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
83 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2ahm[143] | E | R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[155 aa] | A | 100.0 /98.6 |
27 /27 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain | |
2ahm[4] | G | R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[191 aa] | A | 100.0 /98.6 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain | |
2ahm[8] | H | R1AB_CVHSA Replicase polyprotein 1ab, heavy chain[191 aa] | A | 100.0 /98.6 |
8 /10 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain | |
6wiq[8] | B | R1AB_SARS2 Non-structural protein 8[115 aa] | A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Non-structural protein 7 | |
7jlt[2] | D | R1AB_SARS2 Non-structural protein 8[117 aa] | A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Non-structural protein 7 | |
6m71[65] | A | R1AB_SARS2 RNA-directed RNA polymerase[859 aa] | B | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Non-structural protein 7 | |
6m71[2] | C | R1AB_SARS2 Non-structural protein 8[43 aa] | B | 100.0 /100.0 |
20 /20 |
R1AB_SARS2 Non-structural protein 7 | |
6xez[6] | E | R1AB_SARS2 Helicase[596 aa] | C | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Non-structural protein 7 | |
7egq[2] | E | R1AB_SARS2 Helicase[588 aa] | C | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 7 | |
6xqb[1] | D | R1AB_SARS2 Non-structural protein 8[31 aa] | C | 100.0 /100.0 |
12 /12 |
R1AB_SARS2 Non-structural protein 7 | |
7aap[2] | D | R1AB_SARS2 Non-structural protein 8[28 aa] | C | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 Non-structural protein 7 | |
7bv1[1] | D | R1AB_SARS2 Non-structural protein 8[99 aa] | C | 100.0 /100.0 |
16 /16 |
R1AB_SARS2 Non-structural protein 7 | |
7bw4[1] | D | R1AB_SARS2 Non-structural protein 8[87 aa] | C | 100.0 /100.0 |
15 /15 |
R1AB_SARS2 Non-structural protein 7 | |
7oyg[2] | B | R1AB_SARS2 SARS-CoV-2 nsp8[81 aa] | C | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 SARS-CoV-2 nsp7 | |
7thm[1] | D | R1AB_SARS2 Non-structural protein 8[71 aa] | C | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Non-structural protein 7 | |
8g6r[1] | B | A0A1Z2R8Q6_9ALPC nsp8[114 aa] | C | 33.3 /46.9 |
3 /3 |
A0A0M4AW09_9ALPC nsp7 | |
3ub0[2] | A | R1AB_FIPV Non-structural protein 6, nsp6,[190 aa] | B | 66.7 /41.5 |
9 /9 |
R1AB_FIPV Non-structural protein 7, nsp7 | |
3ub0[2] | A | R1AB_FIPV Non-structural protein 6, nsp6,[190 aa] | C | 37.9 /42.3 |
29 /31 |
R1AB_FIPV Non-structural protein 7, nsp7 | |
8g6r[2] | A | A0A0U2C263_9ALPC nsp12[899 aa] | C | 78.6 /46.9 |
14 /14 |
A0A0M4AW09_9ALPC nsp7 | |
8urb[1] | B | U6BRU0_9ALPC nsp8[184 aa] | C | 33.3 /41.4 |
3 /3 |
U6BRU0_9ALPC nsp7 | |
8urb[1] | D | U6BRU0_9ALPC nsp8[184 aa] | C | 50.0 /41.4 |
18 /18 |
U6BRU0_9ALPC nsp7 | |
9cpo[1] | A | R1AB_IBVM RNA-directed RNA polymerase nsp12[930 aa] | C | 75.0 /40.3 |
12 /12 |
R1AB_IBVM Non-structural protein 7 | |
9cpo[1] | B | R1AB_IBVM Non-structural protein 8[195 aa] | C | 66.7 /40.3 |
3 /3 |
R1AB_IBVM Non-structural protein 7 | |
9cpo[1] | D | R1AB_IBVM Non-structural protein 8[195 aa] | C | 34.8 /40.3 |
23 /23 |
R1AB_IBVM Non-structural protein 7 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
83 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2ahm[10] | D | R1AB_CVHSA Replicase polyprotein 1ab, light chain[76 aa] | A | 100.0 /98.6 |
4 /4 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain | |
6wiq[8] | A | R1AB_SARS2 Non-structural protein 7[80 aa] | A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 7 | |
7oyg[2] | H | R1AB_SARS2 SARS-CoV-2 nsp7[62 aa] | C | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 SARS-CoV-2 nsp7 | |
3ub0[2] | C | R1AB_FIPV Non-structural protein 7, nsp7[82 aa] | B | 28.6 /41.5 |
14 /14 |
R1AB_FIPV Non-structural protein 7, nsp7 | |
3ub0[2] | B | R1AB_FIPV Non-structural protein 7, nsp7[82 aa] | C | 66.7 /42.3 |
15 /15 |
R1AB_FIPV Non-structural protein 7, nsp7 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
83 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6wqd[1] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Non-structural protein 7 | |
6wqd[3] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Non-structural protein 7 | |
6xip[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
C | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Non-structural protein 7 | |
6wtc[1] | E |
ACY
ACETIC ACID[4 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Non-structural protein 7 | |
6wtc[1] | F |
ACY
ACETIC ACID[4 atoms] |
C | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Non-structural protein 7 | |
2ahm[4] | I |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /98.6 |
2 /2 |
R1AB_CVHSA Replicase polyprotein 1ab, light chain | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |