Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
890601 | 75 | 11 | YP_009724392.1() | |
QUERYSEQ |
MYSFVSEETGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVNVSLVKPSFYVYSRVKNLNSSRVPDLLV |
75 |
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region | name | description |
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75 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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A | 91.4 | VEMP_CVHSA Envelope small membrane protein | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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75 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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B | VEMP_SARS2 Envelope small membrane protein[31 aa] | A | 100.0 /100.0 |
12 /12 |
VEMP_SARS2 Envelope small membrane protein |
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B | VEMP_CVHSA Envelope small membrane protein[58 aa] | A | 100.0 /91.4 |
9 /9 |
VEMP_CVHSA Envelope small membrane protein |
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E | VEMP_CVHSA Envelope small membrane protein[58 aa] | A | 100.0 /91.4 |
6 /6 |
VEMP_CVHSA Envelope small membrane protein |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |