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seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100] | ![]() [show] [download] [help] |
PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
13759 | 1255 | 0 | P59594(SPIKE_SARS) | RecName: Full=Spike glycoprotein ; Short=S glycoprotein ;AltName: Full=E2 ;AltName: Full=Peplomer protein ;Contains: RecName: Full=Spike protein S1 ;Contains: RecName: Full=Spike protein S2 ;Contains: RecName: Full=Spike protein S2' ;Flags: Precursor; |
QUERYSEQ |
MFIFLLFLTLTSGSDLDRCTTFDDVQAPNYTQHTSSMRGVYYPDEIFRSDTLYLTQDLFLPFYSNVTGFHTINHTFGNPVIPFKDGIYFAATEKSNVVRGWVFGSTMNNKSQSVIIINNSTNVVIRACNFELCDNPFFAVSKPMGTQTHT MIFDNAFNCTFEYISDAFSLDVSEKSGNFKHLREFVFKNKDGFLYVYKGYQPIDVVRDLPSGFNTLKPIFKLPLGINITNFRAILTAFSPAQDIWGTSAAAYFVGYLKPTTFMLKYDENGTITDAVDCSQNPLAELKCSVKSFEIDKGIY QTSNFRVVPSGDVVRFPNITNLCPFGEVFNATKFPSVYAWERKKISNCVADYSVLYNSTFFSTFKCYGVSATKLNDLCFSNVYADSFVVKGDDVRQIAPGQTGVIADYNYKLPDDFMGCVLAWNTRNIDATSTGNYNYKYRYLRHGKLRP FERDISNVPFSPDGKPCTPPALNCYWPLNDYGFYTTTGIGYQPYRVVVLSFELLNAPATVCGPKLSTDLIKNQCVNFNFNGLTGTGVLTPSSKRFQPFQQFGRDVSDFTDSVRDPKTSEILDISPCSFGGVSVITPGTNASSEVAVLYQD VNCTDVSTAIHADQLTPAWRIYSTGNNVFQTQAGCLIGAEHVDTSYECDIPIGAGICASYHTVSLLRSTSQKSIVAYTMSLGADSSIAYSNNTIAIPTNFSISITTEVMPVSMAKTSVDCNMYICGDSTECANLLLQYGSFCTQLNRALS GIAAEQDRNTREVFAQVKQMYKTPTLKYFGGFNFSQILPDPLKPTKRSFIEDLLFNKVTLADAGFMKQYGECLGDINARDLICAQKFNGLTVLPPLLTDDMIAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYE NQKQIANQFNKAISQIQESLTTTSTALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQAAPHGVVFLHVTYV PSQERNFTTAPAICHEGKAYFPREGVFVFNGTSWFITQRNFFSPQIITTDNTFVSGNCDVVIGIINNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWL GFIAGLIAIVMVTILLCCMTSCCSCLKGACSCGSCCKFDEDDSEPVLKGVKLHYT |
1255 |
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region | name | description |
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1-13 | SIGNAL | |
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14-1255 | CHAIN | /note="Spike glycoprotein" /id="PRO_0000037208" |
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14-667 | CHAIN | /note="Spike protein S1" /id="PRO_0000037209" |
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668-1255 | CHAIN | /note="Spike protein S2" /id="PRO_0000037210" |
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798-1255 | CHAIN | /note="Spike protein S2'" /id="PRO_0000444082" |
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14-1195 | TOPO_DOM | /note="Extracellular" |
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1196-1216 | TRANSMEM | /note="Helical" |
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1217-1255 | TOPO_DOM | /note="Cytoplasmic" |
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14-290 | DOMAIN | /note="BetaCoV S1-NTD" |
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321-513 | DOMAIN | /note="BetaCoV S1-CTD" |
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306-527 | REGION | /note="Receptor-binding domain" |
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424-494 | REGION | /note="Receptor-binding motif; binding to human ACE2" |
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798-819 | REGION | /note="Fusion peptide 1" ECO:0000305|PubMed:29056462" |
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817-837 | REGION | /note="Fusion peptide 2" ECO:0000305|PubMed:29056462" |
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902-952 | REGION | /note="Heptad repeat 1" |
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1145-1184 | REGION | /note="Heptad repeat 2" |
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931-975 | COILED | |
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1157-1185 | COILED | |
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1217-1236 | COMPBIAS | /note="Cys-rich" |