Contact Molecules for Homologous Proteins

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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
3940994 97 20 P0DTD2(ORF9B_SARS2) RecName: Full=ORF9b protein; Short=ORF9b;AltName: Full=Accessory protein 9b;AltName: Full=ORF-9b;AltName: Full=Protein 9b;
QUERYSEQ 
MDPKISEMHPALRLVDPQIQLAVTRMENAVGRDQNNVGPKVYPIILRLGSPLSLNMARKTLNSLEDKAFQLTPIAVQMTKLATTEELPDEFVVVTVK
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P0DTD2(ORF9B_SARS2)]

97
region name description
1-97 CHAIN /note="ORF9b protein" /id="PRO_0000449657"
8-97 DOMAIN /note="9b"
1-4 DISORDER predicted by DISOPRED

MONOMER
97
pdb_id a1 identity[%]2 description
7ye8 B 100.0 ORF9B_SARS2 ORF9b protein 
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
97 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7dhg[2] A TOM70_HUMAN Mitochondrial import receptor subunit TOM70[470 aa.. B 100.0
/100.0		 29
/29		 ORF9B_SARS2 ORF9b protein
2cme[6] B Y5_CVHSA HYPOTHETICAL PROTEIN 5[79 aa] A 84.4
/80.3		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
97 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6z4u[1] C 15P
POLYETHYLENE GLYCOL (N=34)[14 atoms] 		B 100.0
/100.0		 7
/7		 ORF9B_SARS2 Protein 9b
7ye7[1] E DD9
nonane[9 atoms] 		A 100.0
/100.0		 1
/1		 ORF9B_SARS2 ORF9b protein
7ye7[1] E DD9
nonane[9 atoms] 		B 100.0
/100.0		 2
/2		 ORF9B_SARS2 ORF9b protein
7ye7[5] F OCT
N-OCTANE[8 atoms] 		C 100.0
/100.0		 3
/3		 ORF9B_SARS2 ORF9b protein
7ye7[1] F OCT
N-OCTANE[8 atoms] 		D 100.0
/100.0		 1
/1		 ORF9B_SARS2 ORF9b protein
2cme[3] I D10
DECANE[10 atoms] 		A 100.0
/80.3		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme[1] I D10
DECANE[10 atoms] 		B 100.0
/80.5		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme[2] J D10
DECANE[10 atoms] 		C 100.0
/81.3		 3
/3		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
2cme[1] K D10
DECANE[10 atoms] 		E 100.0
/81.3		 2
/2		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
97 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
6z4u[8] B ORF9B_SARS2 Protein 9b[82 aa] A 100.0
/100.0		 33
/33		 ORF9B_SARS2 Protein 9b
7ye7[1] B ORF9B_SARS2 ORF9b protein[78 aa] A 100.0
/100.0		 32
/32		 ORF9B_SARS2 ORF9b protein
7ye8[1] B ORF9B_SARS2 ORF9b protein[88 aa] A 100.0
/100.0		 34
/34		 ORF9B_SARS2 ORF9b protein
2cme[2] D Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] C 84.4
/81.3		 32
/32		 Y5_CVHSA HYPOTHETICAL PROTEIN 5
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.