Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
1223555 | 61 | 6 | P0DTC6(NS6_SARS2) | RecName: Full=ORF6 protein; Short=ORF6;AltName: Full=Accessory protein 6;AltName: Full=Non-structural protein 6; Short=ns6;AltName: Full=Protein X3; |
QUERYSEQ |
MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENKYSQLDEEQPMEID |
61 | region | name | description |
1-61 | CHAIN | /note="ORF6 protein" /id="PRO_0000449653" | |
18-24 | REGION | /note="Important for host Golgi localization" | |
60-61 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
61 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
61 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7f60[2] | A | RAE1L_HUMAN mRNA export factor[331 aa] | E | 100.0 /100.0 |
9 /9 |
NS6_SARS2 ORF6 protein | |
7vph[4] | C | RAE1L_HUMAN mRNA export factor[337 aa] | I | 100.0 /100.0 |
9 /9 |
NS6_SARS2 ORF6 protein | |
7vph[1] | B | NUP98_HUMAN Isoform 3 of Nuclear pore complex protein Nup98-Nu.. | L | 100.0 /100.0 |
1 /1 |
NS6_SARS2 ORF6 protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |