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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
13274 275 4 P0DTC3(AP3A_SARS2) RecName: Full=ORF3a protein; Short=ORF3a;AltName: Full=Accessory protein 3a;AltName: Full=Protein 3a;AltName: Full=Protein U274;AltName: Full=Protein X1;
QUERYSEQ
MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWH
TNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P0DTC3(AP3A_SARS2)]

275
region name description
1-275 CHAIN /note="ORF3a protein" /id="PRO_0000449650"
35-55 TRANSMEM /note="Helical"
71-91 TRANSMEM /note="Helical"
94-114 TRANSMEM /note="Helical"
1-275 DISORDER predicted by DISOPRED (1-6,8-8,10-15,267-275)

MONOMER
275
pdb_id a1 identity[%]2 description
6xdc B 100.0 AP3A_SARS2 Protein 3a
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
275 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7kjr[2] C APOA1_HUMAN Apolipoprotein A-I[31 aa] A 100.0
/100.0
6
/6
AP3A_SARS2 Protein 3a
7kjr[2] D APOA1_HUMAN Apolipoprotein A-I[31 aa] A 100.0
/100.0
6
/6
AP3A_SARS2 Protein 3a
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
275 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7kjr[2] E PEE
1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine[23 a..
A 100.0
/100.0
4
/4
AP3A_SARS2 Protein 3a
7kjr[2] E PEE
1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine[23 a..
B 100.0
/100.0
4
/4
AP3A_SARS2 Protein 3a
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
275 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7kjr[4] A AP3A_SARS2 Protein 3a[193 aa] B 100.0
/100.0
55
/55
AP3A_SARS2 Protein 3a
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.