Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
864465 | 1273 | 500 | P0DTC2(SPIKE_SARS2) | RecName: Full=Spike glycoprotein ; Short=S glycoprotein ;AltName: Full=E2 ;AltName: Full=Peplomer protein ;Contains: RecName: Full=Spike protein S1 ;Contains: RecName: Full=Spike protein S2 ;Contains: RecName: Full=Spike protein S2' ;Flags: Precursor; |
QUERYSEQ |
MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNK SWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETK CTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYN YLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITP GTNTSNQVAVLYQDVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECS NLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAM QMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLM SFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDL QELGKYEQYIKWPWYIWLGFIAGLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT |
1273 |
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region | name | description |
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1-13 | SIGNAL | |
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14-1273 | CHAIN | /note="Spike glycoprotein" /id="PRO_0000449646" |
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14-685 | CHAIN | /note="Spike protein S1" /id="PRO_0000449647" |
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686-1273 | CHAIN | /note="Spike protein S2" /id="PRO_0000449648" |
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816-1273 | CHAIN | /note="Spike protein S2'" /id="PRO_0000449649" |
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14-1213 | TOPO_DOM | /note="Extracellular" |
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1214-1234 | TRANSMEM | /note="Helical" |
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1235-1273 | TOPO_DOM | /note="Cytoplasmic" |
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14-303 | DOMAIN | /note="BetaCoV S1-NTD" |
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334-527 | DOMAIN | /note="BetaCoV S1-CTD" ECO:0000269|PubMed:32132184" |
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1-26 | REGION | /note="Disordered" |
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67-80 | REGION | /note="Disordered" |
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142-164 | REGION | /note="Disordered" |
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173-185 | REGION | /note="Disordered" |
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246-262 | REGION | /note="Disordered" |
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280-301 | REGION | /note="Putative superantigen; may bind T-cell receptor alpha/TRAC" |
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319-541 | REGION | /note="Receptor-binding domain (RBD)" |
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319-335 | REGION | /note="Disordered" |
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403-405 | REGION | /note="Integrin-binding motif;" |
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437-508 | REGION | /note="Receptor-binding motif; binding to human ACE2" |
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448-456 | REGION | /note="Immunodominant HLA epitope recognized by the CD8+; called NF9 peptide" |
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455-490 | REGION | /note="Disordered" |
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519-541 | REGION | /note="Disordered" |
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621-640 | REGION | /note="Disordered" |
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673-687 | REGION | /note="Disordered" |
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681-684 | REGION | /note="Putative superantigen; may bind T-cell receptor beta/TRBC1" |
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816-837 | REGION | /note="Fusion peptide 1" |
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828-853 | REGION | /note="Disordered" |
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835-855 | REGION | /note="Fusion peptide 2" |
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920-970 | REGION | /note="Heptad repeat 1" |
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1163-1202 | REGION | /note="Heptad repeat 2" |
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949-993 | COILED | |
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1176-1203 | COILED | |
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1235-1235 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20" |
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1236-1236 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20" |
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1240-1240 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20" |
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1241-1241 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20" |
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1243-1243 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20" |
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1247-1247 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20; partial" |
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1248-1248 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20; partial" |
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1250-1250 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20; partial" |
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1253-1253 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20; partial" |
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1254-1254 | LIPID | /note="S-palmitoyl cysteine; by host ZDHHC20; partial" |
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1-1273 | DISORDER | predicted by DISOPRED |
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1273 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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C | 99.2 | SPIKE_SARS2 Spike glycoprotein | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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1273 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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B | K-874A VHH[116 aa] | A | 100.0 /100.0 |
12 /12 |
SPIKE_SARS2 Spike glycoprotein |
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I | Fab light chain of enhancing antibody 2490[213 aa].. | A | 100.0 /99.5 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
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E | Fab 5A6 light chain[214 aa] | A | 100.0 /99.8 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
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G | Fab 5A6 light chain[214 aa] | A | 100.0 /99.8 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
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E | P008_056 Fab Light chain[213 aa] | C | 100.0 /99.8 |
12 /12 |
SPIKE_SARS2 Spike glycoprotein |
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H | P2G3 Light Chain[214 aa] | I | 100.0 /97.3 |
1 /1 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
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F | mAb 002_S21F2 light chain[215 aa] | B | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
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G | Monoclonal antibody 034_32 light chain[215 aa] | A | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
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E | SP1-77 Fab light chain[212 aa] | A | 100.0 /99.9 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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D | SP1-77 Fab heavy chain[225 aa] | A | 100.0 /99.9 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
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F | LP5 Fab Heavy Chain[119 aa] | A | 100.0 /99.9 |
15 /15 |
SPIKE_SARS2 Spike glycoprotein |
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G | LP5 Fab Light Chain[107 aa] | A | 100.0 /99.9 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
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D | Heavy chain of 17B10 fab[119 aa] | A | 100.0 /99.9 |
8 /8 |
SPIKE_SARS2 Spike glycoprotein |
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E | Light chain of 17B10 fab[106 aa] | A | 100.0 /99.9 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
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D | 4-18 heavy chain[122 aa] | A | 100.0 /99.8 |
18 /18 |
SPIKE_SARS2 Spike glycoprotein |
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E | 4-18 light chain[109 aa] | A | 100.0 /99.8 |
8 /8 |
SPIKE_SARS2 Spike glycoprotein |
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D | pan-sarbecovirus nanobody 1-8[126 aa] | A | 100.0 /99.8 |
21 /21 |
SPIKE_SARS2 Spike glycoprotein |
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B | 1-87 heavy chain[127 aa] | A | 100.0 /99.8 |
16 /16 |
SPIKE_SARS2 Spike glycoprotein |
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C | 1-87 light chain[109 aa] | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
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D | pan-sarbecovirus nanobody 2-57[126 aa] | A | 100.0 /99.8 |
16 /16 |
SPIKE_SARS2 Spike glycoprotein |
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F | pan-sarbecovirus nanobody 2-57[126 aa] | C | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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D | pan-sarbecovirus nanobody 1-22[122 aa] | A | 100.0 /99.8 |
15 /15 |
SPIKE_SARS2 Spike glycoprotein |
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D | pan-sarbecovirus nanobody 2-65[122 aa] | A | 100.0 /99.8 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
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D | pan-sarbecovirus nanobody 1-23[121 aa] | A | 100.0 /99.8 |
18 /18 |
SPIKE_SARS2 Spike glycoprotein |
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F | pan-sarbecovirus nanobody 2-67[127 aa] | A | 100.0 /99.8 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
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F | pan-sarbecovirus nanobody 2-45[121 aa] | A | 100.0 /99.8 |
15 /15 |
SPIKE_SARS2 Spike glycoprotein |
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B | 4-33 heavy chain[122 aa] | A | 100.0 /99.8 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
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C | 4-33 light chain[110 aa] | A | 100.0 /99.8 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
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B | 1-57 Fab heavy chain[129 aa] | A | 100.0 /99.8 |
14 /14 |
SPIKE_SARS2 Spike glycoprotein |
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D | pan-sarbecovirus nanobody 2-34[127 aa] | A | 100.0 /99.8 |
16 /16 |
SPIKE_SARS2 Spike glycoprotein |
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D | 5-24 heavy chain[126 aa] | A | 100.0 /99.8 |
14 /14 |
SPIKE_SARS2 Spike glycoprotein |
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D | The heavy chain of SARS-CoV-2 antibody A19-61.1[12.. | A | 100.0 /99.8 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
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F | The heavy chain of SARS-CoV-2 antibody A19-61.1[12.. | C | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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E | The light chain of SARS-COV-2 antibody A19-61.1[10.. | A | 100.0 /99.8 |
9 /9 |
SPIKE_SARS2 Spike glycoprotein |
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D | 4-8 Heavy Chain[125 aa] | A | 100.0 /99.8 |
15 /15 |
SPIKE_SARS2 Spike glycoprotein |
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E | 4-8 Light chain[105 aa] | A | 100.0 /99.8 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
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D | P008_056 Fab Heavy chain[224 aa] | C | 100.0 /99.8 |
14 /14 |
SPIKE_SARS2 Spike glycoprotein |
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D | Fab 5A6 heavy chain[220 aa] | A | 100.0 /99.8 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
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D | 5-7 heavy chain[134 aa] | A | 100.0 /99.8 |
22 /22 |
SPIKE_SARS2 Spike glycoprotein |
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E | 5-7 light chain[106 aa] | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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D | XG005 Heavy chain[223 aa] | A | 100.0 /99.8 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
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E | Fab P17 heavy chain[120 aa] | A | 100.0 /100.0 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
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G | Fab P17 light chain[108 aa] | A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
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G | Fab P17 light chain[108 aa] | B | 100.0 /100.0 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
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N | light chain of H014 Fab[107 aa] | A | 100.0 /100.0 |
8 /8 |
SPIKE_SARS2 Spike glycoprotein |
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G | Light Chain of H014 Fab[107 aa] | M | 100.0 /100.0 |
8 /8 |
SPIKE_SARS2 Spike glycoprotein |
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O | heavy chain of H014 Fab[122 aa] | A | 100.0 /100.0 |
16 /16 |
SPIKE_SARS2 Spike glycoprotein |
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H | Heavy Chain of H014 Fab[122 aa] | M | 100.0 /100.0 |
8 /8 |
SPIKE_SARS2 Spike glycoprotein |
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J | H014 heavy chain[120 aa] | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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I | Heavy Chain of FC05 Fab[120 aa] | M | 100.0 /100.0 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
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C | heavy chain of FC05 Fab[120 aa] | G | 100.0 /100.0 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
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J | Light Chain of FC05 Fab[109 aa] | M | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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D | light chain of FC05 Fab[109 aa] | G | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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S | FC05 light chain[109 aa] | G | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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D | Light chain Fab of HB27[111 aa] | A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
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J | Light chain Fab of HB27[111 aa] | B | 100.0 /100.0 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
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L | HB27 light chain[110 aa] | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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E | Heavy chain Fab of HB27[118 aa] | A | 100.0 /100.0 |
12 /12 |
SPIKE_SARS2 Spike glycoprotein |
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O | HB27 heavy chain[119 aa] | A | 100.0 /99.8 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
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B | n3113[116 aa] | A | 100.0 /99.8 |
16 /16 |
SPIKE_SARS2 Spike glycoprotein |
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F | n3113.1[116 aa] | A | 100.0 /99.8 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
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A | Fab 3D11 heavy chain[211 aa] | C | 100.0 /99.8 |
9 /9 |
SPIKE_SARS2 Spike glycoprotein |
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A | 2-17 Heavy Chain[124 aa] | D | 100.0 /99.8 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
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B | 2-17 Light Chain[109 aa] | D | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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D | Neutralizing nanobody P86[116 aa] | A | 100.0 /99.7 |
19 /19 |
SPIKE_SARS2 Spike glycoprotein |
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D | Neutralizing nanobody P86[116 aa] | B | 100.0 /99.7 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
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E | Neutralizing nanobody P86[116 aa] | C | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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B | Fab 3D11 light chain[212 aa] | C | 100.0 /99.8 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
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G | mAb 002-13 Light chain[216 aa] | A | 100.0 /99.4 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
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E | mAb 002-13 Light chain[216 aa] | B | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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E | mAb 002-13 Light chain[216 aa] | C | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
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N | mAb15 VL[215 aa] | B | 100.0 /99.7 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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F | antibody A23-58.1 light chain[213 aa] | I | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
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E | P5C3 Light Chain[215 aa] | K | 83.3 /97.3 |
6 /6 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | mAb 002-02 light chain[214 aa] | A | 100.0 /99.4 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
E | mAb60 VL[212 aa] | A | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | mAb15 VH[225 aa] | A | 100.0 /99.7 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | mAb60 VH[204 aa] | A | 100.0 /99.7 |
9 /9 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
D | mAb60 VH[204 aa] | B | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
D | mAb60 VH[204 aa] | B | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | XG005 Light Chain[203 aa] | A | 100.0 /99.8 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
E | XG005 Light Chain[203 aa] | C | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | heavy chain of 2G1[214 aa] | A | 100.0 /99.5 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
H | heavy chain of 2G1[214 aa] | A | 100.0 /99.5 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | SARS2-57 Fv heavy chain[117 aa] | A | 100.0 /99.5 |
9 /9 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | SARS2-57 Fv light chain[112 aa] | A | 100.0 /99.5 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
D | Fab Heavy chain of enhancing antibody[227 aa] | C | 100.0 /99.5 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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H | Fab Heavy chain of enhancing antibody 2490[225 aa].. | A | 100.0 /99.5 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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E | mAb 002-S21F2 Heavy chain[224 aa] | B | 100.0 /99.4 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | mAb 002-02 Heavy chain[222 aa] | A | 100.0 /99.4 |
14 /14 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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F | mAb 002-13 heavy chain[234 aa] | A | 100.0 /99.4 |
16 /16 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | CV3-13 Fab heavy chain[124 aa] | A | 100.0 /99.4 |
12 /12 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C | CV3-13 Fab light chain[107 aa] | A | 100.0 /99.4 |
12 /12 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
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A | PVI.V6-14 Fab light chain, variable region[107 aa].. | C | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
A | PVI.V6-14 Fab light chain, variable region[107 aa].. | F | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
B | PVI.V6-14 Fab heavy chain, variable region[126 aa].. | C | 100.0 /99.4 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | DARPin FSR22[155 aa] | A | 100.0 /99.4 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | C1520 Fab Heavy Chain[126 aa] | A | 100.0 /99.4 |
18 /18 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
E | C1520 Fab Light Chain[112 aa] | A | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | M8a-28 Fab heavy chain[119 aa] | A | 100.0 /99.4 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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E | M8a-28 Fab light chain[106 aa] | A | 100.0 /99.4 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | Synthetic nanobody (sybody), Sb45[121 aa] | A | 100.0 /99.4 |
28 /28 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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F | Synthetic nanobody (sybody), Sb45[121 aa] | A | 100.0 /99.4 |
8 /8 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | Synthetic nanobody (sybody), Sb45[121 aa] | C | 100.0 /99.4 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
B | Macrocyclic peptide S1B3inL1[19 aa] | A | 100.0 /99.4 |
17 /17 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C | Macrocyclic peptide S1B3inL1[19 aa] | A | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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F | REGN10987 Fab homologue (Light chain)[218 aa] | A | 100.0 /99.4 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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G | REGN10987 Fab homologue (Heavy chain)[223 aa] | A | 100.0 /99.4 |
9 /9 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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E | Nanobody Nb17[119 aa] | A | 100.0 /99.3 |
9 /9 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
F | Nanobody Nb17[119 aa] | A | 100.0 /99.3 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | J08 fragment antigen binding heavy chain variable .. | A | 100.0 /99.3 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C | J08 fragment antigen binding light chain variable .. | A | 100.0 /99.3 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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F | Nanobody 7A3[125 aa] | A | 100.0 /99.2 |
18 /18 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | Nanobody 7A3[125 aa] | A | 100.0 /99.2 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
F | Nanobody 7A3[125 aa] | B | 75.0 /99.2 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | Nanobody 7A3[125 aa] | C | 100.0 /99.2 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | Nanobody 8A2[132 aa] | B | 100.0 /99.2 |
23 /23 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
B | Heavy chain of S5D2 Fab[214 aa] | A | 100.0 /99.0 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
C | Light chain of S5D2 Fab[217 aa] | A | 100.0 /99.0 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | Heavy chain of S3H3 Fab[217 aa] | A | 100.0 /99.0 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | Light chain of S3H3 Fab[215 aa] | A | 100.0 /99.0 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
E | 5-24 light chain[109 aa] | A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | antibody A23-58.1 light chain[108 aa] | G | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C | 1-57 Fab light chain[108 aa] | A | 100.0 /99.8 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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G | Light chain of antibody B1-182.1[108 aa] | A | 50.0 /97.3 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
C | antibody A23-58.1 heavy chain[123 aa] | G | 100.0 /99.4 |
8 /8 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | Heavy chain of antibody A19-46.1[231 aa] | B | 100.0 /97.3 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | Light chain of antibody A19-46.1[216 aa] | B | 81.8 /97.3 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | Heavy chain of antibody A19-46.1[126 aa] | A | 100.0 /97.3 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | Light chain of antibody A19-46.1[110 aa] | A | 84.6 /97.3 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | antibody A23-58.1 heavy chain[216 aa] | I | 100.0 /99.4 |
10 /10 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | P5C3 Heavy Chain[221 aa] | K | 75.0 /97.3 |
8 /8 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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G | P2G3 Heavy Chain[228 aa] | I | 91.7 /97.3 |
12 /12 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | de novo designed binder[65 aa] | C | 63.6 /97.3 |
11 /11 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
D | Heavy chain of Fab BD55-5840[119 aa] | A | 50.0 /97.2 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | Heavy chain of Fab BD55-5840[119 aa] | A | 87.5 /97.2 |
8 /8 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
I | Light chain of Fab BD55-5840[109 aa] | A | 85.7 /97.2 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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D | ACE2_HUMAN Angiotensin-converting enzyme 2[588 aa] | A | 100.0 /99.8 |
14 /14 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
A | ACE2_HUMAN Angiotensin-converting enzyme 2[597 aa] | C | 100.0 /99.8 |
21 /21 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | ACE2_HUMAN Angiotensin-converting enzyme 2[597 aa] | C | 100.0 /99.4 |
18 /18 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | S309 heavy chain[123 aa] | A | 91.7 /96.6 |
12 /12 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
H | S309 heavy chain[123 aa] | B | 100.0 /96.6 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | S309 light chain[108 aa] | A | 66.7 /96.6 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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|||||||
1273 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
BA |
GE9
|
A | 100.0 /100.0 |
5 /5 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
CA |
SIA
|
A | 100.0 /100.0 |
8 /8 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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EA |
BLR
|
A | 100.0 /100.0 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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NA |
NAG
|
A | 100.0 /100.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
QA |
NAG
|
A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
RA |
NAG
|
A | 100.0 /100.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
SA |
NAG
|
A | 100.0 /100.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
TA |
NAG
|
A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
AB |
NAG
|
A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
HA |
NAG
|
A | 100.0 /99.8 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
IA |
NAG
|
A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
MA |
NAG
|
A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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NA |
NAG
|
A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
LA |
NAG
|
A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
AB |
NAG
|
C | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
HA |
NAG
|
C | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
UA |
NAG
|
C | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
XA |
NAG
|
C | 100.0 /99.6 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
YA |
NAG
|
C | 100.0 /99.6 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
Z |
NAG
|
C | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
ZA |
NAG
|
C | 100.0 /99.6 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
OA |
NAG
|
A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Z |
NAG
|
A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K |
NAG
|
A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
BA |
NAG
|
A | 100.0 /99.7 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
O |
NAG
|
C | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
QA |
NAG
|
A | 0.0 /97.3 |
1 /1 |
A0A6B9WHD3_CVHSA Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
T |
NAG
|
A | 100.0 /97.3 |
1 /1 |
A0A6B9WHD3_CVHSA Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
X |
NAG
|
A | 100.0 /97.3 |
3 /3 |
A0A6B9WHD3_CVHSA Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
R |
NAG
|
A | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Z |
NAG
|
B | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
BA |
NAG
|
C | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
MA |
NAG
|
D | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
ZA |
NAG
|
D | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
JA |
NAG
|
A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K |
NAG
|
A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
L |
NAG
|
A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
M |
NAG
|
A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Q |
NAG
|
A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
R |
NAG
|
A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
S |
NAG
|
A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S |
NAG
|
B | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
LA |
NAG
|
G | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
WA |
NAG
|
H | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
JA |
NAG
|
D | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
QA |
NAG
|
D | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
NA |
NAG
|
A | 100.0 /99.3 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
KA |
NAG
|
C | 100.0 /99.3 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
DA |
NAG
|
A | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() |
![]() |
JA |
NAG
|
A | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() |
![]() |
Q |
NAG
|
A | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() |
![]() |
R |
NAG
|
A | 100.0 /99.6 |
2 /2 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() |
![]() |
S |
NAG
|
B | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() |
![]() |
QA |
NAG
|
C | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
IA |
NAG
|
G | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
LA |
NAG
|
B | 100.0 /97.4 |
2 /2 |
A0A8A4XEV3_SARS2 Surface glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
SA |
NAG
|
B | 100.0 /97.4 |
1 /1 |
A0A8A4XEV3_SARS2 Surface glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
X |
NAG
|
B | 50.0 /97.4 |
2 /2 |
A0A8A4XEV3_SARS2 Surface glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
AA |
NAG
|
C | 100.0 /97.3 |
1 /1 |
A0A8A4XEV3_SARS2 Surface glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
X |
NAG
|
B | 100.0 /97.3 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Z |
NAG
|
C | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
PA |
NAG
|
C | 100.0 /97.3 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
T |
NAG
|
A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
Z |
NAG
|
B | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
HA |
NAG
|
C | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
S |
NAG
|
C | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
KA |
NAG
|
C | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
GA |
NAG
|
A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
MA |
NAG
|
B | 100.0 /99.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
OA |
NAG
|
A | 100.0 /99.3 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
Z |
NAG
|
A | 100.0 /96.6 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
OA |
NAG
|
A | 100.0 /97.3 |
1 /1 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
AA |
NAG
|
E | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
U |
NAG
|
B | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
BB |
NAG
|
A | 100.0 /99.9 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
XA |
VCG
|
A | 100.0 /100.0 |
11 /11 |
SPIKE_SARS2 CO1A1_HUMAN Spike glycoprotein,Collagen alpha-1(I) chain |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
YA |
VCG
|
A | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 CO1A1_HUMAN Spike glycoprotein,Collagen alpha-1(I) chain |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
S |
BLA
|
A | 100.0 /99.8 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
HA |
BLA
|
A | 100.0 /99.8 |
10 /10 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
I |
MAN
|
A | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
![]() |
|||||||
1273 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() |
![]() |
O | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-.. | A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
G | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
2 /2 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
JA | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
K | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
L | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
M | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
N | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
V | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /100.0 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
N | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.9 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.9 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.3 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.3 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.4 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
M | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.4 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
N | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
X | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
N | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.5 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
O | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.5 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Z | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.5 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 85.7 /99.0 |
7 /7 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /97.3 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
O | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /97.3 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.3 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.3 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
U | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /100.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
K | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
L | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
M | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Q | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
R | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.6 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
L | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.6 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
O | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /97.3 |
2 /2 |
A0A6B9WHD3_CVHSA Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 80.0 /97.3 |
5 /5 |
A0A6B9WHD3_CVHSA Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Q | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | B | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
P | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | M | 100.0 /100.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
K | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | B | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
N | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | B | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 CO1A1_HUMAN Spike glycoprotein,Collagen alpha-1(I) chain |
![]() ![]() ![]() ![]() ![]() |
![]() |
R | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.9 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
M | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | G | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
J | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | D | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.3 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
Z | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.3 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
AA | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Z | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | B | 100.0 /99.5 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
P | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
Z | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
K | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 66.7 /99.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.5 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.5 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
K | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | B | 100.0 /99.5 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /97.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
L | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
AA | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
Q | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | B | 100.0 /99.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
R | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | B | 100.0 /99.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
Q | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /96.6 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | A | 100.0 /99.7 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | B | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | C | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
T | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | A | 100.0 /99.9 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | A | 100.0 /99.3 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
X | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. | A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
L | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alp.. | A | 100.0 /99.9 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
S | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.8 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
Z | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | I | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
N | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.9 |
6 /6 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.4 |
3 /3 |
A0A8A4XEV3_SARS2 A0A2Z5WJZ7_9CAUD Surface glycoprotein,Fibritin,SARS-CoV-2 S Omicron.. |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.4 |
1 /1 |
A0A8A4XEV3_SARS2 A0A2Z5WJZ7_9CAUD Surface glycoprotein,Fibritin,SARS-CoV-2 S Omicron.. |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.4 |
1 /1 |
A0A8A4XEV3_SARS2 A0A2Z5WJZ7_9CAUD Surface glycoprotein,Fibritin,SARS-CoV-2 S Omicron.. |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.4 |
4 /4 |
A0A8A4XEV3_SARS2 A0A2Z5WJZ7_9CAUD Surface glycoprotein,Fibritin,SARS-CoV-2 S Omicron.. |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
L | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.4 |
2 /2 |
A0A8A4XEV3_SARS2 A0A2Z5WJZ7_9CAUD Surface glycoprotein,Fibritin,SARS-CoV-2 S Omicron.. |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
P | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 0.0 /97.4 |
1 /1 |
A0A8A4XEV3_SARS2 A0A2Z5WJZ7_9CAUD Surface glycoprotein,Fibritin,SARS-CoV-2 S Omicron.. |
![]() ![]() ![]() ![]() ![]() |
![]() |
O | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
J | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
V | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.6 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.6 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
H | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
V | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | B | 100.0 /99.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
CA | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.0 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
P | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.0 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 75.0 /97.3 |
4 /4 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
N | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /97.3 |
2 /2 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
G | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | B | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
S | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. | G | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 SARS-CoV-2 spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. | A | 100.0 /99.8 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
H | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
J | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. | A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. | A | 100.0 /97.4 |
5 /5 |
A0A8A4XEV3_SARS2 A0A2Z5WJZ7_9CAUD Surface glycoprotein,Fibritin,SARS-CoV-2 S Omicron.. |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
X | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. | K | 66.7 /97.3 |
3 /3 |
SPIKE_SARS2 M1E1E4_9HIV1 Spike glycoprotein,Envelope glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
G | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. | A | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. | A | 100.0 /99.0 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
W | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. | C | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
N | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | B | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
X | alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-be.. | C | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
M | 2-acetamido-2-deoxy-beta-D-glucopyranose-(2-3)-2-a.. | D | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
M | 2-acetamido-2-deoxy-beta-D-glucopyranose-(2-3)-2-a.. | E | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
M | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-a.. | A | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
E | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | A | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
O | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.8 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
D | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.7 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
E | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | A | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | B | 100.0 /99.7 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
G | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-be.. | B | 100.0 /99.7 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
N | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. | C | 100.0 /99.6 |
1 /1 |
SPIKE_SARS2 WAC_BPT4 Spike glycoprotein,Fibritin |
![]() ![]() ![]() ![]() ![]() |
![]() |
EA | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(.. | C | 100.0 /99.4 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(.. | C | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
L | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(.. | C | 100.0 /99.4 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
I | alpha-D-mannopyranose-(1-4)-[alpha-D-mannopyranose.. | C | 100.0 /99.4 |
5 /5 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
J | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-.. | C | 100.0 /99.4 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
HC | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() |
![]() |
TA | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | C | 100.0 /99.8 |
3 /3 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
K | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. | A | 50.0 /96.6 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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|||||||
1273 | pdb_id | contact mol | homologue | ||||
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
a3 | description | a4 | identity[%]5 | Ncon6 | description | |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | SPIKE_SARS2 Spike glycoprotein[1107 aa] | A | 100.0 /100.0 |
134 /134 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C | SPIKE_SARS2 Spike glycoprotein[1107 aa] | A | 100.0 /100.0 |
123 /123 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | SPIKE_SARS2 Spike glycoprotein[1098 aa] | A | 99.1 /99.8 |
108 /108 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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C | SPIKE_SARS2 Spike glycoprotein[1098 aa] | A | 100.0 /99.8 |
94 /94 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | SPIKE_SARS2 Spike glycoprotein[1069 aa] | C | 99.1 /99.6 |
110 /110 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
F | SPIKE_SARS2 Spike glycoprotein[1108 aa] | A | 100.0 /99.8 |
9 /9 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
D | SPIKE_SARS2 Spike glycoprotein[1120 aa] | C | 100.0 /99.8 |
12 /12 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | SPIKE_SARS2 Spike glycoprotein[1112 aa] | A | 100.0 /99.8 |
86 /86 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
![]() |
C | SPIKE_SARS2 Spike glycoprotein[1087 aa] | A | 100.0 /99.8 |
82 /82 |
SPIKE_SARS2 Spike glycoprotein |
![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() |
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B | SPIKE_SARS2 Spike glycoprotein[1123 aa] | A | 100.0 /99.3 |
69 /69 |
SPIKE_SARS2 Spike glycoprotein |
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C | SPIKE_SARS2 Spike glycoprotein[1123 aa] | A | 100.0 /99.3 |
74 /74 |
SPIKE_SARS2 Spike glycoprotein |
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B | SPIKE_SARS2 Spike glycoprotein[1077 aa] | A | 100.0 /99.8 |
96 /96 |
SPIKE_SARS2 Spike glycoprotein |
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K | SPIKE_SARS2 Spike glycoprotein[1076 aa] | B | 100.0 /99.7 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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B | SPIKE_SARS2 Spike glycoprotein[1076 aa] | K | 100.0 /99.7 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
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A | SPIKE_SARS2 Spike glycoprotein[875 aa] | B | 100.0 /99.8 |
72 /72 |
SPIKE_SARS2 Spike glycoprotein |
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A | SPIKE_SARS2 Spike glycoprotein[875 aa] | C | 100.0 /99.8 |
82 /82 |
SPIKE_SARS2 Spike glycoprotein |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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1273 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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VA |
ELA
|
A | 100.0 /100.0 |
14 /14 |
SPIKE_SARS2 CO1A1_HUMAN Spike glycoprotein,Collagen alpha-1(I) chain |
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WA |
ELA
|
A | 100.0 /100.0 |
4 /4 |
SPIKE_SARS2 CO1A1_HUMAN Spike glycoprotein,Collagen alpha-1(I) chain |
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DA |
EIC
|
A | 100.0 /99.8 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
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HA |
EIC
|
A | 100.0 /99.8 |
4 /4 |
SPIKE_SARS2 Spike glycoprotein |
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HA |
EIC
|
A | 100.0 /99.8 |
13 /13 |
SPIKE_SARS2 Spike glycoprotein |
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AA |
EIC
|
A | 100.0 /100.0 |
15 /15 |
SPIKE_SARS2 Spike glycoprotein |
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AB |
EIC
|
A | 100.0 /100.0 |
1 /1 |
SPIKE_SARS2 Spike glycoprotein |
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EA |
STE
|
A | 100.0 /99.5 |
11 /11 |
SPIKE_SARS2 Spike glycoprotein |
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RA |
STE
|
A | 100.0 /99.5 |
2 /2 |
SPIKE_SARS2 Spike glycoprotein |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |