Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
3211985 362 500 P01889(HLAB_HUMAN) RecName: Full=HLA class I histocompatibility antigen, B alpha chain;AltName: Full=Human leukocyte antigen B; Short=HLA-B;Flags: Precursor;
QUERYSEQ
MLVMAPRTVLLLLSAALALTETWAGSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYGCDVGPDGRLLRGHDQYAYDGKDYIAL
NEDLRSWTAADTAAQITQRKWEAAREAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWEP
SSQSTVPIVGIVAGLAVLAVVVIGAVVAAVMCRRKSSGGKGGSYSQAACSDSAQGSDVSLTA
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P01889(HLAB_HUMAN)]

362
region name description
1-24 SIGNAL
25-362 CHAIN /note="HLA class I histocompatibility antigen, B alpha chain" /id="PRO_0000018833"
25-309 TOPO_DOM /note="Extracellular"
310-333 TRANSMEM /note="Helical"
334-362 TOPO_DOM /note="Cytoplasmic"
209-295 DOMAIN /note="Ig-like C1-type"
3-11 REGION /note="VL9 epitope"
25-114 REGION /note="Alpha-1"
115-206 REGION /note="Alpha-2"
207-298 REGION /note="Alpha-3"
299-309 REGION /note="Connecting peptide"
337-362 REGION /note="Disordered"
339-362 COMPBIAS /note="Polar residues"
87-87 BINDING /ligand="a peptide antigen" /ligand_id="ChEBI:CHEBI:166823" /ligand_note="pathogen-derived peptide antigen"
108-108 BINDING /ligand="a peptide antigen" /ligand_id="ChEBI:CHEBI:166823" /ligand_note="pathogen-derived peptide antigen"
167-167 BINDING /ligand="a peptide antigen" /ligand_id="ChEBI:CHEBI:166823" /ligand_note="pathogen-derived peptide antigen"
170-170 BINDING /ligand="a peptide antigen" /ligand_id="ChEBI:CHEBI:166823" /ligand_note="pathogen-derived peptide antigen"
176-176 BINDING /ligand="a peptide antigen" /ligand_id="ChEBI:CHEBI:166823" /ligand_note="pathogen-derived peptide antigen"
183-183 BINDING /ligand="a peptide antigen" /ligand_id="ChEBI:CHEBI:166823" /ligand_note="pathogen-derived peptide antigen"
195-195 BINDING /ligand="a peptide antigen" /ligand_id="ChEBI:CHEBI:166823" /ligand_note="pathogen-derived peptide antigen"
1-362 DISORDER predicted by DISOPRED

MONOMER
362
pdb_id a1 identity[%]2 description
6uj7 A 100.0
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.