Contact Molecules for Homologous Proteins | ||||
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seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100] | ![]() [show] [download] [help] |
PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
1695464 | 164 | 29 | P01185(NEU2_HUMAN) | RecName: Full=Vasopressin-neurophysin 2-copeptin;AltName: Full=AVP-NPII;Contains: RecName: Full=Arg-vasopressin; AltName: Full=Arginine-vasopressin;Contains: RecName: Full=Neurophysin 2; AltName: Full=Neurophysin-II;Contains: RecName: Full=Copeptin;Flags: Precursor; |
QUERYSEQ |
MPDTMLPACFLGLLAFSSACYFQNCPRGGKRAMSDLELRQCLPCGPGGKGRCFGPSICCADELGCFVGTAEALRCQEENYLPSPCQSGQKACGSGGRCAAFGVCCNDESCVTEPECREGFHRRARASDRSNATQLDGPAGALLLRLVQLA GAPEPFEPAQPDAY |
164 |
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region | name | description |
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1-19 | SIGNAL | |
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20-28 | PEPTIDE | /note="Arg-vasopressin" /id="PRO_0000020515" |
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32-124 | CHAIN | /note="Neurophysin 2" /id="PRO_0000020516" |
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126-164 | PEPTIDE | /note="Copeptin" /id="PRO_0000020517" |
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1-164 | DISORDER | predicted by DISOPRED |
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164 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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A | 95.3 | NEU2_BOVIN NEUROPHYSIN II | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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164 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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B | Lys Vasopressin[6 aa] | A | 100.0 /94.9 |
14 /14 |
NEU2_BOVIN NEUROPHYSIN 2 |
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B | OXYTOCIN[9 aa] | A | 100.0 /95.1 |
16 /16 |
NEU2_BOVIN NEUROPHYSIN II |
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B | OXYTOCIN[9 aa] | C | 100.0 /93.7 |
5 /5 |
NEU2_BOVIN NEUROPHYSIN II |
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C | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 92.3 /95.1 |
13 /13 |
NEU2_BOVIN NEUROPHYSIN II |
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C | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 100.0 /95.1 |
4 /4 |
NEU2_BOVIN NEUROPHYSIN II |
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C | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 100.0 /95.1 |
2 /2 |
NEU2_BOVIN NEUROPHYSIN II |
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A | NEU2_BOVIN NEUROPHYSIN II[81 aa] | C | 100.0 /93.7 |
4 /4 |
NEU2_BOVIN NEUROPHYSIN II |
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A | NEU2_BOVIN NEUROPHYSIN II[81 aa] | C | 100.0 /93.7 |
4 /4 |
NEU2_BOVIN NEUROPHYSIN II |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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164 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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E |
PHE
|
A | 100.0 /95.3 |
7 /7 |
NEU2_BOVIN NEUROPHYSIN II |
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F |
PHE
|
A | 100.0 /82.3 |
7 /7 |
NEU1_BOVIN Oxytocin-neurophysin 1 |
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F |
TYR
|
A | 100.0 /95.3 |
8 /8 |
NEU2_BOVIN NEUROPHYSIN II |
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G |
TYR
|
A | 100.0 /82.3 |
9 /9 |
NEU1_BOVIN Oxytocin-neurophysin 1 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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164 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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C |
CD
|
A | 100.0 /94.9 |
1 /1 |
NEU2_BOVIN NEUROPHYSIN 2 |
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D |
CD
|
A | 100.0 /94.9 |
1 /1 |
NEU2_BOVIN NEUROPHYSIN 2 |
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E |
CD
|
A | 100.0 /94.9 |
1 /1 |
NEU2_BOVIN NEUROPHYSIN 2 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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164 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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A | NEU2_BOVIN NEUROPHYSIN 2[79 aa] | A | 92.3 /94.9 |
13 /13 |
NEU2_BOVIN NEUROPHYSIN 2 |
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A | NEU2_BOVIN NEUROPHYSIN II[81 aa] | A | 100.0 /95.1 |
7 /7 |
NEU2_BOVIN NEUROPHYSIN II |
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B | NEU2_BOVIN NEUROPHYSIN II[79 aa] | A | 91.7 /95.3 |
12 /12 |
NEU2_BOVIN NEUROPHYSIN II |
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B | NEU1_BOVIN Oxytocin-neurophysin 1[81 aa] | A | 66.7 /82.3 |
15 /15 |
NEU1_BOVIN Oxytocin-neurophysin 1 |
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B | NEU1_BOVIN Neurophysin 1[92 aa] | A | 66.7 /80.0 |
15 /15 |
NEU1_BOVIN Neurophysin 1 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |