Contact Molecules for Homologous Proteins

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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
4066375 923 231 O14786(NRP1_HUMAN) RecName: Full=Neuropilin-1 ;AltName: Full=Vascular endothelial cell growth factor 165 receptor;AltName: CD_antigen=CD304;Flags: Precursor;
QUERYSEQ 
MERGLPLLCAVLALVLAPAGAFRNDKCGDTIKIESPGYLTSPGYPHSYHPSEKCEWLIQAPDPYQRIMINFNPHFDLEDRDCKYDYVEVFDGENENGHFRGKFCGKIAPPPVVSSGPFLFIKFVSDYETHGAGFSIRYEIFKRGPECSQN
YTTPSGVIKSPGFPEKYPNSLECTYIVFVPKMSEIILEFESFDLEPDSNPPGGMFCRYDRLEIWDGFPDVGPHIGRYCGQKTPGRIRSSSGILSMVFYTDSAIAKEGFSANYSVLQSSVSEDFKCMEALGMESGEIHSDQITASSQYSTN
WSAERSRLNYPENGWTPGEDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISMRFEVYGCKITDYPCSGMLGMVSGLISDSQITSS
NQGDRNWMPENIRLVTSRSGWALPPAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNNYDTPELRTFPALSTRFIRIYPERATHGGLGLRMELLGCEVEAPTAGPTTPNGNLV
DECDDDQANCHSGTGDDFQLTGGTTVLATEKPTVIDSTIQSEFPTYGFNCEFGWGSHKTFCHWEHDNHVQLKWSVLTSKTGPIQDHTGDGNFIYSQADENQKGKVARLVSPVVYSQNSAHCMTFWYHMSGSHVGTLRVKLRYQKPEEYDQ
LVWMAIGHQGDHWKEGRVLLHKSLKLYQVIFEGEIGKGNLGGIAVDDISINNHISQEDCAKPADLDKKNPEIKIDETGSTPGYEGEGEGDKNISRKPGNVLKTLDPILITIIAMSALGVLLGAVCGVVLYCACWHNGMSERNLSALENYN
FELVDGVKLKKDKLNTQSTYSEA
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [O14786(NRP1_HUMAN)]

923
region name description
1-21 SIGNAL ECO:0000269|PubMed:9529250"
22-923 CHAIN /note="Neuropilin-1" /id="PRO_0000021859"
22-856 TOPO_DOM /note="Extracellular"
857-879 TRANSMEM /note="Helical"
880-923 TOPO_DOM /note="Cytoplasmic"
27-141 DOMAIN /note="CUB 1"
147-265 DOMAIN /note="CUB 2"
275-424 DOMAIN /note="F5/8 type C 1"
431-583 DOMAIN /note="F5/8 type C 2"
645-811 DOMAIN /note="MAM"
820-845 REGION /note="Disordered"
195-195 BINDING /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" ECO:0007744|PDB:2QQM"
209-209 BINDING /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" ECO:0007744|PDB:2QQM"
250-250 BINDING /ligand="Ca(2+)" /ligand_id="ChEBI:CHEBI:29108" ECO:0007744|PDB:2QQM"
1-923 DISORDER predicted by DISOPRED

MONOMER
923
pdb_id a1 identity[%]2 description
4gz9 A 91.6 NRP1_MOUSE Neuropilin-1
5l73 A 98.9 NRP1_HUMAN Neuropilin-1
8fdg A 34.1 FA5_HUMAN FA5_HUMAN Coagulation factor V 
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
923 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2qqk[3] C Antibody Light Chain[211 aa] A 75.0
/54.2		 4
/4		 NRP2_HUMAN Neuropilin-2
2qqk[2] C Antibody Light Chain[211 aa] A 36.4
/54.2		 11
/11		 NRP2_HUMAN Neuropilin-2
2qql[2] C Antibody Light Chain[214 aa] A 75.0
/53.8		 4
/4		 NRP2_HUMAN Neuropilin-2
2qqn[1] C Antibody light chain[214 aa] A 100.0
/100.0		 8
/8		 NRP1_HUMAN Neuropilin-1
2qqn[1] B Antibody heavy chain[226 aa] A 100.0
/100.0		 6
/6		 NRP1_HUMAN Neuropilin-1
6tkk[1] B ACE-ARG-PRO-GLN-PRO-ARG[6 aa] A 100.0
/100.0		 10
/10		 NRP1_HUMAN Neuropilin-1
7jjc[3] E SPIKE_SARS2 Spike protein S1[3 aa] A 100.0
/100.0		 9
/9		 NRP1_HUMAN Neuropilin-1
7jjc[1] G SPIKE_SARS2 Spike protein S1[7 aa] C 100.0
/100.0		 13
/13		 NRP1_HUMAN Neuropilin-1
7p5u[2] C MGC0122[3 aa] A 100.0
/100.0		 9
/9		 NRP1_HUMAN Neuropilin-1
8c5g[2] C CTXL_LEIQU Chlorotoxin[36 aa] A 100.0
/100.0		 14
/14		 NRP1_HUMAN Neuropilin-1
9eou[1] B OSTP_HUMAN Osteopontin[2 aa] A 100.0
/100.0		 11
/11		 NRP1_HUMAN Neuropilin-1
8pfe[2] B LYS-ASP-LYS-PRO-PRO-ARG[3 aa] A 100.0
/96.1		 11
/11		 NRP1_HUMAN Neuropilin-1
4gza[2] G SEM3A_MOUSE Semaphorin-3A[484 aa] H 100.0
/92.3		 5
/5		 NRP1_MOUSE Neuropilin-1
7m0r[2] B SEM3A_MOUSE Semaphorin-3A[588 aa] A 100.0
/92.4		 14
/14		 NRP1_MOUSE Neuropilin-1
7m0r[2] F PLXA4_MOUSE Plexin-A4[1133 aa] A 100.0
/92.4		 5
/5		 NRP1_MOUSE Neuropilin-1
2orz[1] B Tuftsin[3 aa] A 100.0
/92.3		 10
/10		 NRP1_RAT Neuropilin-1
4gza[2] A PLXA2_MOUSE Plexin-A2[656 aa] H 100.0
/92.3		 7
/7		 NRP1_MOUSE Neuropilin-1
7t4s[1] C Q38LY2_HCMV Envelope protein UL128[112 aa] F 44.4
/54.6		 9
/9		 NRP2_HUMAN Neuropilin-2
7t4s[1] D Q38M07_HCMV Envelope glycoprotein UL130[166 aa] F 0.0
/54.6		 1
/1		 NRP2_HUMAN Neuropilin-2
7t4s[1] E Q8AZ45_HCMV Envelope protein UL131A[99 aa] F 0.0
/54.6		 2
/2		 NRP2_HUMAN Neuropilin-2
8ivx[1] B Heavy chain of antibody 14V4 Fab fragment[215 aa] A 47.4
/54.5		 19
/19		 NRP2_HUMAN aNRP2-14
8ivx[1] C Light chain of antibody 14V4 Fab fragment[213 aa] A 75.0
/54.5		 4
/4		 NRP2_HUMAN aNRP2-14
6gh8[2] A C5ILC1_9VIRU Glycoprotein[110 aa] B 46.7
/54.3		 15
/15		 NRP2_HUMAN Neuropilin-2
2qqk[3] B Antibody Heavy Chain[219 aa] A 77.8
/54.2		 9
/9		 NRP2_HUMAN Neuropilin-2
2qqk[2] B Antibody Heavy Chain[219 aa] A 18.2
/54.2		 11
/11		 NRP2_HUMAN Neuropilin-2
2qql[2] B Antibody Heavy Chain[222 aa] A 58.3
/53.8		 12
/12		 NRP2_HUMAN Neuropilin-2
7m22[1] A C8BLJ3_HCMV Envelope protein UL128[107 aa] D 25.0
/53.7		 8
/8		 NRP2_HUMAN Neuropilin-2
7m22[1] B A0A0G2TB82_HCMV Envelope glycoprotein UL130[111 aa] D 0.0
/53.7		 1
/1		 NRP2_HUMAN Neuropilin-2
7m22[1] C Q38M21_HCMV UL131A[108 aa] D 50.0
/53.7		 2
/2		 NRP2_HUMAN Neuropilin-2
8ivw[4] B Heavy chian of antibody 10V8 Fab fragment[219 aa] A 62.5
/53.6		 16
/16		 NRP2_HUMAN Neuropilin-2
8ivw[4] C Light chain of antibody 10V8 Fab fragment[215 aa] A 50.0
/53.6		 6
/6		 NRP2_HUMAN Neuropilin-2
6tdb[1] G C-terminal VEGFB167 peptide[3 aa] D 100.0
/52.3		 10
/10		 NRP2_HUMAN Neuropilin-2
6tjt[2] C VEGFC C terminal peptide[3 aa] A 100.0
/52.3		 10
/10		 NRP2_HUMAN Neuropilin-2
5dn2[2] F VEGFA_HUMAN Vascular endothelial growth factor A[4 aa] A 90.0
/51.9		 10
/10		 NRP2_HUMAN Neuropilin-2
5dn2[1] G VEGFA_HUMAN Vascular endothelial growth factor A[8 aa] C 91.7
/51.9		 12
/12		 NRP2_HUMAN Neuropilin-2
6tdb[2] E C-terminal VEGFB167 peptide[5 aa] A 83.3
/51.9		 12
/12		 NRP2_HUMAN Neuropilin-2
6tdb[1] F C-terminal VEGFB167 peptide[2 aa] C 90.9
/51.9		 11
/11		 NRP2_HUMAN Neuropilin-2
6fzv[2] A CO3A1_HUMAN Collagen alpha-1(III) chain[241 aa] D 27.3
/38.6		 11
/12		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
6fzv[2] B CO3A1_HUMAN Collagen alpha-1(III) chain[239 aa] D 50.0
/38.6		 8
/9		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
1iqd[1] A HUMAN MONOCLONAL BO2C11 FAB LIGHT CHAIN[208 aa] C 0.0
/40.9		 7
/8		 FA8_HUMAN HUMAN FACTOR VIII
1iqd[1] B HUMAN MONOCLONAL BO2C11 FAB HEAVY CHAIN[200 aa] C 25.0
/40.9		 8
/11		 FA8_HUMAN HUMAN FACTOR VIII
4ki5[1] A MURINE MONOCLONAL 3E6 FAB HEAVY CHAIN[218 aa] E 33.3
/40.9		 3
/5		 FA8_HUMAN Coagulation factor VIII
4xzu[2] A 3E6 antibody Fab heavy chain[213 aa] C 33.3
/40.9		 3
/5		 FA8_HUMAN Coagulation factor VIII
4ki5[1] B MURINE MONOCLONAL 3E6 FAB LIGHT CHAIN[211 aa] E 33.3
/40.9		 6
/6		 FA8_HUMAN Coagulation factor VIII
4xzu[1] B 3E6 antibody Fab light chain[213 aa] C 20.0
/40.9		 5
/5		 FA8_HUMAN Coagulation factor VIII
4ki5[1] C MURINE MONOCLONAL G99 FAB HEAVY CHAIN[224 aa] E 28.6
/40.9		 14
/14		 FA8_HUMAN Coagulation factor VIII
4ki5[1] D MURINE MONOCLONAL G99 FAB LIGHT CHAIN[209 aa] E 25.0
/40.9		 8
/8		 FA8_HUMAN Coagulation factor VIII
4xzu[1] E 3E6 antibody Fab light chain[195 aa] F 20.0
/40.9		 5
/5		 FA8_HUMAN Coagulation factor VIII
3kq4[3] A IF_HUMAN Gastric intrinsic factor[385 aa] B 33.3
/38.8		 9
/17		 CUBN_HUMAN Cubilin
7azb[1] B VHH[112 aa] A 20.0
/38.3		 15
/17		 DDR2_HUMAN Discoidin domain-containing receptor 2
9en2[1] B VHH-H4[121 aa] A 50.0
/38.2		 16
/20		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
9en2[1] C VHH-I5[116 aa] A 46.2
/38.2		 13
/14		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
2wuh[1] B COLLAGEN PEPTIDE[28 aa] A 0.0
/37.9		 6
/7		 DDR2_HUMAN DISCOIDIN DOMAIN RECEPTOR 2
2wuh[1] C COLLAGEN PEPTIDE[29 aa] A 0.0
/37.9		 9
/9		 DDR2_HUMAN DISCOIDIN DOMAIN RECEPTOR 2
7kbt[1] B G99 heavy chain[115 aa] A 36.4
/37.1		 11
/11		 FA8_PIG FA8_HUMAN FA8_PIG FA8_PIG FA8_HUMAN Coagulation factor VIII,Coagulation factor VIII,Co..
7kbt[1] C G99 light chain[96 aa] A 12.5
/37.1		 8
/8		 FA8_PIG FA8_HUMAN FA8_PIG FA8_PIG FA8_HUMAN Coagulation factor VIII,Coagulation factor VIII,Co..
7k66[1] B 2A9 heavy chain[217 aa] A 50.0
/36.9		 10
/10		 FA8_PIG FA8_HUMAN FA8_PIG FA8_HUMAN Coagulation factor VIII,Coagulation factor VIII,Co..
7k66[1] C 2A9 light chain[213 aa] A 14.3
/36.9		 7
/10		 FA8_PIG FA8_HUMAN FA8_PIG FA8_HUMAN Coagulation factor VIII,Coagulation factor VIII,Co..
8g6i[1] C NB33 heavy chain[215 aa] A 0.0
/36.9		 5
/5		 FA8_PIG FA8_HUMAN FA8_PIG FA8_HUMAN Coagulation factor VIII chimera from human and pig..
2r7e[1] A FA8_HUMAN Coagulation factor VIII[693 aa] B 0.0
/36.7		 6
/75		 FA8_HUMAN Coagulation factor VIII
3cdz[3] A FA8_HUMAN Coagulation factor VIII heavy chain[630 aa] B 12.5
/36.7		 8
/62		 FA8_HUMAN Coagulation factor VIII light chain
5k8d[1] A FA8_HUMAN Coagulation factor VIII[611 aa] B 16.7
/36.7		 6
/67		 FA8_HUMAN IGHG1_HUMAN Coagulation factor VIII,Ig gamma-1 chain C region
7kwo[1] B von Willebrand factor-XTEN-Fc[478 aa] A 12.5
/36.7		 24
/45		 Coagulation factor FVIII-Fc-XTEN
3pob[2] B MBL collagen-like peptide[28 aa] A 50.0
/36.1		 6
/6		 MASP1_RAT Mannan-binding lectin serine protease 1
1sdd[1] A FA5_BOVIN Coagulation factor V[268 aa] B 0.0
/34.9		 3
/31		 FA5_BOVIN Coagulation factor V
7tpp[2] C FA5_HUMAN Coagulation factor Va[709 aa] D 0.0
/34.7		 1
/49		 FA5_HUMAN Coagulation factor Va
8h3s[1] C TRY1_HUMAN Serine protease 1[221 aa] A 42.9
/34.7		 7
/19		 ENTK_HUMAN Enteropeptidase non-catalytic heavy chain
7tpp[1] B FA10_HUMAN Factor X light chain[139 aa] D 0.0
/34.7		 1
/7		 FA5_HUMAN Coagulation factor Va
4lor[1] B collagen-like peptide from C1q[23 aa] A 0.0
/34.3		 1
/1		 C1S_HUMAN Complement C1s subcomponent heavy chain
4lor[1] C collagen-like peptide from C1q[23 aa] A 50.0
/34.3		 2
/3		 C1S_HUMAN Complement C1s subcomponent heavy chain
4lor[1] D collagen-like peptide from C1q[23 aa] A 80.0
/34.3		 5
/6		 C1S_HUMAN Complement C1s subcomponent heavy chain
6f1c[4] B C1R_HUMAN Complement C1r subcomponent[287 aa] C 35.7
/34.3		 14
/26		 C1S_HUMAN Complement C1s subcomponent
7kxy[1] A FA5_HUMAN Coagulation factor Va[588 aa] B 0.0
/33.7		 2
/50		 FA5_HUMAN Coagulation factor Va
6f1c[4] D C1S_HUMAN Complement C1s subcomponent[276 aa] A 18.2
/33.5		 11
/25		 C1R_HUMAN Complement C1r subcomponent
7wqw[3] B ENTK_HUMAN Enteropeptidase catalytic light chain[235 aa] A 18.2
/30.7		 11
/22		 ENTK_HUMAN Enteropeptidase non-catalytic heavy chain
7f56[5] C GRIK2_RAT Glutamate receptor ionotropic, kainate 2[835 aa] E 40.0
/36.0		 5
/9		 NETO2_RAT Neuropilin and tolloid-like protein 2
7f56[2] D GRIK2_RAT Glutamate receptor ionotropic, kainate 2[818 aa] E 37.5
/36.0		 8
/8		 NETO2_RAT Neuropilin and tolloid-like protein 2
7f59[2] D GRIK2_RAT Glutamate receptor ionotropic, kainate 2[818 aa] E 20.0
/26.6		 5
/6		 NETO2_RAT Neuropilin and tolloid-like protein 2
7f5a[1] B GRIK2_RAT Glutamate receptor ionotropic, kainate 2[818 aa] F 20.0
/29.9		 5
/6		 NETO2_RAT Neuropilin and tolloid-like protein 2
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
COMPOUND
923 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3i97[2] C 8DR
(S)-2-(3-(benzo[c][1,2,5]thiadiazole-4-sulfonamido.. 		A 100.0
/100.0		 11
/11		 NRP1_HUMAN Neuropilin-1
5ijr[1] C HRG
L-HOMOARGININE[13 atoms] 		A 100.0
/100.0		 10
/10		 NRP1_HUMAN Neuropilin-1
5iyy[2] C R40
N~2~-[(benzyloxy)carbonyl]-L-arginine[22 atoms] 		A 100.0
/100.0		 11
/11		 NRP1_HUMAN Neuropilin-1
5j1x[4] E AR5
N~2~-(tert-butoxycarbonyl)-L-arginine[19 atoms] 		A 100.0
/100.0		 11
/11		 NRP1_HUMAN Neuropilin-1
5jgi[1] C AAG
N-ALPHA-L-ACETYL-ARGININE[15 atoms] 		B 100.0
/100.0		 10
/10		 NRP1_HUMAN Neuropilin-1
5jgq[1] D 6JY
N~2~-(benzenecarbonyl)-L-arginine[20 atoms] 		B 100.0
/100.0		 10
/10		 NRP1_HUMAN Neuropilin-1
5jhk[1] C 6K8
N-(benzenecarbonyl)glycyl-L-arginine[24 atoms] 		A 100.0
/100.0		 11
/11		 NRP1_HUMAN Neuropilin-1
6fmc[2] B DUE
(2~{S})-2-[[3-[[5-[4-(aminomethyl)phenyl]-1-benzof.. 		A 100.0
/100.0		 11
/11		 NRP1_HUMAN Neuropilin-1
6fmf[1] C TFA
trifluoroacetic acid[7 atoms] 		A 100.0
/100.0		 4
/4		 NRP1_HUMAN Neuropilin-1
5c7g[1] B BCN
BICINE[11 atoms] 		A 100.0
/100.0		 6
/6		 NRP1_HUMAN Neuropilin-1
5l73[2] E BCN
BICINE[11 atoms] 		A 100.0
/98.9		 6
/6		 NRP1_HUMAN Neuropilin-1
5l73[1] E BCN
BICINE[11 atoms] 		B 100.0
/99.4		 4
/4		 NRP1_HUMAN Neuropilin-1
5l73[1] F TAM
TRIS(HYDROXYETHYL)AMINOMETHANE[11 atoms] 		A 100.0
/98.9		 5
/5		 NRP1_HUMAN Neuropilin-1
1d7p[1] D CYS
CYSTEINE[7 atoms] 		A 50.0
/40.9		 4
/5		 FA8_HUMAN COAGULATION FACTOR VIII PRECURSOR
3hnb[1] B 768
(2R)-1-(2,4-dichlorophenoxy)-3-[(2E)-2-imino-3-(2-.. 		A 33.3
/40.9		 6
/6		 FA8_HUMAN Coagulation factor VIII
1czs[1] B PHG
PHENYLMERCURY[7 atoms] 		A 28.6
/39.3		 7
/7		 FA5_HUMAN PROTEIN (COAGULATION FACTOR V)
7s0p[1] B SEP
PHOSPHOSERINE[11 atoms] 		A 42.9
/38.9		 7
/7		 FA8_PIG Coagulation factor VIII
1sdd[1] H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		B 50.0
/34.9		 2
/5		 FA5_BOVIN Coagulation factor V
2qqk[2] D NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 100.0
/54.2		 2
/2		 NRP2_HUMAN Neuropilin-2
2qqk[3] E NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/54.2		 1
/1		 NRP2_HUMAN Neuropilin-2
3cdz[2] H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		B 50.0
/36.7		 2
/4		 FA8_HUMAN Coagulation factor VIII light chain
3kq4[3] R NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		B 0.0
/38.8		 1
/1		 CUBN_HUMAN Cubilin
4bxs[1] G NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		B 100.0
/32.7		 2
/2		 FA5V_PSETE VENOM PROTHROMBIN ACTIVATOR PSEUTARIN-C NON-CATALY..
4gz9[2] C NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 100.0
/91.6		 5
/5		 NRP1_MOUSE Neuropilin-1
4lor[1] J NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/34.3		 2
/2		 C1S_HUMAN Complement C1s subcomponent heavy chain
5cis[2] E NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 50.0
/35.3		 2
/4		 A2VCV7_RAT Mannan-binding lectin serine peptidase 2
5ckq[2] B NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/36.7		 1
/2		 MASP1_RAT Mannan-binding lectin serine protease 1
5fws[4] E NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/28.7		 3
/3		 KREM1_HUMAN KREMEN PROTEIN 1
6f1c[8] M NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/33.5		 1
/1		 C1R_HUMAN Complement C1r subcomponent
6f39[1] I NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 33.3
/34.6		 3
/3		 C1R_HUMAN Complement C1r subcomponent
6v55[1] E NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/39.4		 4
/4		 AGRG6_DANRE Adhesion G-protein coupled receptor G6
6v55[1] H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/39.4		 2
/3		 AGRG6_DANRE Adhesion G-protein coupled receptor G6
6v55[1] N NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 0.0
/39.4		 2
/4		 AGRG6_DANRE Adhesion G-protein coupled receptor G6
7bzu[61] H NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		E 0.0
/28.7		 5
/5		 KRM1
7t4s[1] R NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		F 0.0
/54.6		 2
/2		 NRP2_HUMAN Neuropilin-2
7t4s[1] S NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		F 100.0
/54.6		 1
/1		 NRP2_HUMAN Neuropilin-2
7wqw[3] G NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 50.0
/30.7		 2
/3		 ENTK_HUMAN Enteropeptidase non-catalytic heavy chain
7wqx[1] C NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 50.0
/30.7		 2
/2		 ENTK_HUMAN Enteropeptidase
7wqx[1] D NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 25.0
/30.7		 4
/4		 ENTK_HUMAN Enteropeptidase
8tn9[1] C NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		A 50.0
/34.8		 2
/4		 FA5_HUMAN Coagulation factor V
9cth[1] I NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. 		B 100.0
/34.8		 1
/3		 FA5_HUMAN Activated Factor V (FVa) light chain
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
923 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
4rn5[1] C ZN
ZINC ION[1 atoms] 		A 100.0
/100.0		 1
/1		 NRP1_HUMAN Neuropilin-1
4rn5[1] D ZN
ZINC ION[1 atoms] 		A 100.0
/100.0		 1
/1		 NRP1_HUMAN Neuropilin-1
5dq0[1] B ZN
ZINC ION[1 atoms] 		A 0.0
/52.3		 3
/3		 NRP2_HUMAN Neuropilin-2
5dq0[1] C ZN
ZINC ION[1 atoms] 		A 50.0
/52.3		 2
/2		 NRP2_HUMAN Neuropilin-2
5dq0[1] D ZN
ZINC ION[1 atoms] 		A 100.0
/52.3		 1
/1		 NRP2_HUMAN Neuropilin-2
4xzu[1] H MG
MAGNESIUM ION[1 atoms] 		C 0.0
/40.9		 2
/2		 FA8_HUMAN Coagulation factor VIII
1nt0[4] D CA
CALCIUM ION[1 atoms] 		A 25.0
/35.9		 4
/7		 MASP2_RAT mannose-binding protein associated serine protease..
2qqm[1] D CA
CALCIUM ION[1 atoms] 		A 100.0
/99.8		 5
/5		 NRP1_HUMAN Neuropilin-1
2qqo[2] C CA
CALCIUM ION[1 atoms] 		A 80.0
/53.4		 5
/5		 NRP2_HUMAN Neuropilin-2
2qqo[1] F CA
CALCIUM ION[1 atoms] 		A 0.0
/53.4		 1
/1		 NRP2_HUMAN Neuropilin-2
2wno[12] C CA
CALCIUM ION[1 atoms] 		A 60.0
/36.8		 5
/5		 TSG6_HUMAN TUMOR NECROSIS FACTOR-INDUCIBLE GENE 6 PROTEIN
3dem[4] D CA
CALCIUM ION[1 atoms] 		A 0.0
/38.6		 3
/6		 Q96RS4_HUMAN Complement factor MASP-3
3dem[60] E CA
CALCIUM ION[1 atoms] 		A 100.0
/38.6		 3
/4		 Q96RS4_HUMAN Complement factor MASP-3
3dem[22] F CA
CALCIUM ION[1 atoms] 		A 75.0
/38.6		 4
/4		 Q96RS4_HUMAN Complement factor MASP-3
3kq4[3] Y CA
CALCIUM ION[1 atoms] 		B 60.0
/38.8		 5
/5		 CUBN_HUMAN Cubilin
3poe[1] C CA
CALCIUM ION[1 atoms] 		A 100.0
/36.1		 2
/2		 MASP1_RAT Mannan-binding lectin serine protease 1
4gz9[2] D CA
CALCIUM ION[1 atoms] 		A 100.0
/91.6		 5
/5		 NRP1_MOUSE Neuropilin-1
5fws[4] F CA
CALCIUM ION[1 atoms] 		A 60.0
/28.7		 5
/5		 KREM1_HUMAN KREMEN PROTEIN 1
5fww[5] D CA
CALCIUM ION[1 atoms] 		B 60.0
/28.7		 5
/5		 KREM1_HUMAN KREMEN PROTEIN 1
6f1c[4] K CA
CALCIUM ION[1 atoms] 		A 50.0
/33.5		 6
/6		 C1R_HUMAN Complement C1r subcomponent
6f39[2] G CA
CALCIUM ION[1 atoms] 		A 28.6
/34.6		 7
/7		 C1R_HUMAN Complement C1r subcomponent
6fzv[2] M CA
CALCIUM ION[1 atoms] 		D 80.0
/38.6		 5
/5		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
7m0r[2] H CA
CALCIUM ION[1 atoms] 		A 100.0
/92.4		 6
/6		 NRP1_MOUSE Neuropilin-1
7m22[1] F CA
CALCIUM ION[1 atoms] 		D 75.0
/53.7		 4
/4		 NRP2_HUMAN Neuropilin-2
7t4s[1] T CA
CALCIUM ION[1 atoms] 		F 80.0
/54.6		 5
/5		 NRP2_HUMAN Neuropilin-2
7uab[12] CA CA
CALCIUM ION[1 atoms] 		C 50.0
/30.1		 2
/5		 MEP1A_HUMAN Meprin A subunit alpha
9en2[1] D CA
CALCIUM ION[1 atoms] 		A 80.0
/38.2		 5
/5		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
9en2[1] E CA
CALCIUM ION[1 atoms] 		A 60.0
/38.2		 5
/5		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
4bxs[1] J CU
COPPER (II) ION[1 atoms] 		B 0.0
/32.7		 3
/5		 FA5V_PSETE VENOM PROTHROMBIN ACTIVATOR PSEUTARIN-C NON-CATALY..
7k66[1] G CU
COPPER (II) ION[1 atoms] 		A 0.0
/36.9		 1
/5		 FA8_PIG FA8_HUMAN FA8_PIG FA8_HUMAN Coagulation factor VIII,Coagulation factor VIII,Co..
6mf0[2] K CU1
COPPER (I) ION[1 atoms] 		A 0.0
/36.9		 1
/4		 FA8_PIG FA8_HUMAN FA8_PIG FA8_PIG FA8_HUMAN Coagulation factor VIII chimera
2wno[1] B CO
COBALT (II) ION[1 atoms] 		A 0.0
/36.8		 1
/1		 TSG6_HUMAN TUMOR NECROSIS FACTOR-INDUCIBLE GENE 6 PROTEIN
4gwm[1] X CL
CHLORIDE ION[1 atoms] 		B 0.0
/32.5		 1
/3		 MEP1B_HUMAN Meprin A subunit beta
5dq0[1] E CL
CHLORIDE ION[1 atoms] 		A 50.0
/52.3		 2
/2		 NRP2_HUMAN Neuropilin-2
5dq0[1] F CL
CHLORIDE ION[1 atoms] 		A 0.0
/52.3		 4
/4		 NRP2_HUMAN Neuropilin-2
5fwv[2] E CL
CHLORIDE ION[1 atoms] 		A 0.0
/28.7		 2
/2		 KREM1_HUMAN KREMEN PROTEIN 1
7aq1[2] N CL
CHLORIDE ION[1 atoms] 		A 0.0
/32.5		 1
/4		 MEP1B_HUMAN Meprin B subunit beta
4gwm[2] N NA
SODIUM ION[1 atoms] 		A 50.0
/31.7		 4
/6		 MEP1B_HUMAN Meprin A subunit beta
4gwn[4] H NA
SODIUM ION[1 atoms] 		A 50.0
/32.5		 4
/6		 MEP1B_HUMAN Meprin A subunit beta
4lmf[8] E NA
SODIUM ION[1 atoms] 		A 62.5
/34.3		 8
/8		 C1S_HUMAN Complement C1s subcomponent heavy chain
4lmf[8] I NA
SODIUM ION[1 atoms] 		B 57.1
/34.3		 7
/7		 C1S_HUMAN Complement C1s subcomponent heavy chain
6f1c[6] L NA
SODIUM ION[1 atoms] 		A 28.6
/33.5		 7
/7		 C1R_HUMAN Complement C1r subcomponent
6f1d[1] C NA
SODIUM ION[1 atoms] 		A 37.5
/36.9		 8
/8		 C1R_HUMAN Complement C1r subcomponent
6f1h[1] U NA
SODIUM ION[1 atoms] 		C 50.0
/34.3		 2
/2		 C1S_HUMAN Complement C1s subcomponent
8a1f[2] H NA
SODIUM ION[1 atoms] 		A 50.0
/29.9		 2
/3		 PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
OTHERPOLY
923 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
2qqm[1] B alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-be.. A 100.0
/99.8		 5
/5		 NRP1_HUMAN Neuropilin-1
3kq4[3] H alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. B 50.0
/38.8		 4
/4		 CUBN_HUMAN Cubilin
4aqb[2] B alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 25.0
/39.5		 4
/5		 MASP1_HUMAN MANNAN-BINDING LECTIN SERINE PROTEASE 1
6f1c[1] F alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. B 0.0
/33.5		 5
/5		 C1R_HUMAN Complement C1r subcomponent
6mf0[2] E alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 50.0
/36.9		 2
/7		 FA8_PIG FA8_HUMAN FA8_PIG FA8_PIG FA8_HUMAN Coagulation factor VIII chimera
6mf0[1] H alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-.. B 33.3
/36.9		 3
/9		 FA8_PIG FA8_HUMAN FA8_PIG FA8_PIG FA8_HUMAN Coagulation factor VIII chimera
2r7e[1] E alpha-D-mannopyranose-(1-2)-beta-D-mannopyranose-(.. B 33.3
/36.7		 3
/7		 FA8_HUMAN Coagulation factor VIII
5k8d[1] E alpha-D-mannopyranose-(1-2)-beta-D-mannopyranose-(.. B 50.0
/36.7		 2
/7		 FA8_HUMAN IGHG1_HUMAN Coagulation factor VIII,Ig gamma-1 chain C region
4bdv[1] D beta-D-mannopyranose-(1-3)-[beta-D-mannopyranose-(.. B 25.0
/36.7		 4
/7		 FA8_HUMAN FACTOR VIIIA LIGHT CHAIN
6f1c[1] E beta-D-galactopyranose-(1-4)-alpha-D-mannopyranose.. A 0.0
/33.5		 3
/3		 C1R_HUMAN Complement C1r subcomponent
6f39[2] C beta-D-galactopyranose-(1-4)-alpha-D-mannopyranose.. A 0.0
/34.6		 5
/5		 C1R_HUMAN Complement C1r subcomponent
6f1h[1] E 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-bet.. A 0.0
/33.5		 4
/4		 C1R_HUMAN Complement C1r subcomponent
6f1h[1] F beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-b.. B 0.0
/33.3		 2
/2		 C1R_HUMAN Complement C1r subcomponent
4gwm[1] D alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 33.3
/31.7		 6
/7		 MEP1B_HUMAN Meprin A subunit beta
4gwn[4] C alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose.. A 16.7
/32.5		 6
/7		 MEP1B_HUMAN Meprin A subunit beta
4gwm[1] I alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. B 33.3
/32.5		 6
/7		 MEP1B_HUMAN Meprin A subunit beta
7uac[10] D beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 20.0
/30.1		 5
/7		 MEP1A_HUMAN Meprin A subunit alpha
2qqm[1] C 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 100.0
/99.8		 4
/4		 NRP1_HUMAN Neuropilin-1
7kbt[1] D 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. A 33.3
/37.1		 3
/6		 FA8_PIG FA8_HUMAN FA8_PIG FA8_PIG FA8_HUMAN Coagulation factor VIII,Coagulation factor VIII,Co..
8a1f[1] E 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-a.. B 25.0
/29.9		 4
/4		 PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa
4gz9[5] B beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 100.0
/91.6		 3
/3		 NRP1_MOUSE Neuropilin-1
6f1h[1] G beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 0.0
/33.3		 5
/5		 C1R_HUMAN Complement C1r subcomponent
6f1h[1] H beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. C 0.0
/34.3		 5
/5		 C1S_HUMAN Complement C1s subcomponent
6mf2[1] B beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 25.0
/36.7		 4
/8		 FA8_HUMAN FA8_HUMAN Coagulation factor VIII
7f56[2] I beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. E 0.0
/36.0		 1
/1		 NETO2_RAT Neuropilin and tolloid-like protein 2
7kwo[1] C beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. A 50.0
/36.7		 2
/5		 Coagulation factor FVIII-Fc-XTEN
8a1f[1] F beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-bet.. B 16.7
/29.9		 6
/9		 PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa
7uab[2] J 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. C 25.0
/30.1		 8
/11		 MEP1A_HUMAN Meprin A subunit alpha
8a1f[1] C 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[al.. A 25.0
/29.9		 4
/4		 PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa
8a1f[1] D alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(.. A 20.0
/29.9		 5
/9		 PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
923 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
5l73[1] B NRP1_HUMAN Neuropilin-1[174 aa] A 100.0
/98.9		 11
/11		 NRP1_HUMAN Neuropilin-1
5l73[1] A NRP1_HUMAN Neuropilin-1[174 aa] B 100.0
/99.4		 11
/11		 NRP1_HUMAN Neuropilin-1
4deq[1] B NRP1_HUMAN VEGFA_HUMAN Neuropilin-1, Vascular endothelial growth factor A.. A 100.0
/99.4		 3
/11		 NRP1_HUMAN VEGFA_HUMAN Neuropilin-1, Vascular endothelial growth factor A..
4deq[1] A NRP1_HUMAN VEGFA_HUMAN Neuropilin-1, Vascular endothelial growth factor A.. B 100.0
/99.4		 18
/18		 NRP1_HUMAN VEGFA_HUMAN Neuropilin-1, Vascular endothelial growth factor A..
4gz9[2] A NRP1_MOUSE Neuropilin-1[562 aa] A 96.8
/91.6		 31
/31		 NRP1_MOUSE Neuropilin-1
4qds[2] B NRP2_HUMAN Neuropilin-2[179 aa] A 60.0
/54.7		 20
/20		 NRP2_HUMAN Neuropilin-2
2qql[2] A NRP2_HUMAN Neuropilin-2[554 aa] A 44.4
/53.8		 9
/9		 NRP2_HUMAN Neuropilin-2
2qqo[1] B NRP2_HUMAN Neuropilin-2[426 aa] A 33.3
/53.4		 3
/3		 NRP2_HUMAN Neuropilin-2
2qqo[1] A NRP2_HUMAN Neuropilin-2[431 aa] B 66.7
/53.2		 6
/6		 NRP2_HUMAN Neuropilin-2
4qdq[2] A NRP2_HUMAN Neuropilin-2[316 aa] A 90.9
/52.0		 11
/11		 NRP2_HUMAN Neuropilin-2
4aqb[2] A MASP1_HUMAN MANNAN-BINDING LECTIN SERINE PROTEASE 1[345 aa] A 50.0
/39.5		 8
/20		 MASP1_HUMAN MANNAN-BINDING LECTIN SERINE PROTEASE 1
3dem[2] B Q96RS4_HUMAN Complement factor MASP-3[265 aa] A 30.8
/38.6		 13
/22		 Q96RS4_HUMAN Complement factor MASP-3
3jd6[32] A XLRS1_HUMAN Retinoschisin[167 aa] A 50.0
/37.3		 4
/7		 XLRS1_HUMAN Retinoschisin
3jd6[32] A XLRS1_HUMAN Retinoschisin[167 aa] A 66.7
/37.3		 6
/12		 XLRS1_HUMAN Retinoschisin
3jd6[32] A XLRS1_HUMAN Retinoschisin[167 aa] A 33.3
/37.3		 3
/3		 XLRS1_HUMAN Retinoschisin
5n6w[16] K XLRS1_HUMAN Retinoschisin[157 aa] A 50.0
/37.3		 2
/2		 XLRS1_HUMAN Retinoschisin
5ckq[2] A MASP1_RAT Mannan-binding lectin serine protease 1[276 aa] A 42.9
/36.7		 7
/17		 MASP1_RAT Mannan-binding lectin serine protease 1
3poi[18] A MASP1_RAT Mannan-binding lectin serine protease 1[113 aa] A 20.0
/36.7		 5
/5		 MASP1_RAT Mannan-binding lectin serine protease 1
3poi[18] A MASP1_RAT Mannan-binding lectin serine protease 1[113 aa] A 25.0
/36.7		 4
/5		 MASP1_RAT Mannan-binding lectin serine protease 1
3poi[12] B MASP1_RAT Mannan-binding lectin serine protease 1[114 aa] A 14.3
/36.7		 7
/9		 MASP1_RAT Mannan-binding lectin serine protease 1
3poi[12] B MASP1_RAT Mannan-binding lectin serine protease 1[114 aa] A 50.0
/36.7		 16
/17		 MASP1_RAT Mannan-binding lectin serine protease 1
1nt0[2] B MASP2_RAT mannose-binding protein associated serine protease.. A 23.1
/35.9		 13
/18		 MASP2_RAT mannose-binding protein associated serine protease..
5cis[4] A A2VCV7_RAT Mannan-binding lectin serine peptidase 2[276 aa] A 20.0
/35.3		 5
/20		 A2VCV7_RAT Mannan-binding lectin serine peptidase 2
5ckn[2] B A2VCV7_RAT Mannan-binding lectin serine peptidase 2[278 aa] A 18.8
/35.3		 16
/20		 A2VCV7_RAT Mannan-binding lectin serine peptidase 2
4lmf[4] D C1S_HUMAN Complement C1s subcomponent heavy chain[276 aa] A 66.7
/34.3		 9
/22		 C1S_HUMAN Complement C1s subcomponent heavy chain
6f1c[2] B C1R_HUMAN Complement C1r subcomponent[287 aa] A 16.7
/33.5		 6
/10		 C1R_HUMAN Complement C1r subcomponent
6f39[2] B C1R_HUMAN Complement C1r subcomponent[280 aa] A 0.0
/34.6		 3
/12		 C1R_HUMAN Complement C1r subcomponent
4gwm[2] B MEP1B_HUMAN Meprin A subunit beta[554 aa] A 20.0
/31.7		 5
/22		 MEP1B_HUMAN Meprin A subunit beta
4gwn[6] A MEP1B_HUMAN Meprin A subunit beta[533 aa] A 20.0
/32.5		 5
/23		 MEP1B_HUMAN Meprin A subunit beta
7uab[2] A MEP1A_HUMAN Meprin A subunit alpha[481 aa] C 0.0
/30.1		 14
/29		 MEP1A_HUMAN Meprin A subunit alpha
7uab[6] D MEP1A_HUMAN Meprin A subunit alpha[542 aa] C 50.0
/30.1		 4
/23		 MEP1A_HUMAN Meprin A subunit alpha
7uaf[8] D MEP1A_HUMAN Meprin A subunit alpha[529 aa] A 0.0
/30.1		 12
/25		 MEP1A_HUMAN Meprin A subunit alpha
8a1f[2] B PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa[3.. A 20.0
/29.9		 5
/31		 PTPRK_HUMAN Receptor-type tyrosine-protein phosphatase kappa
5fws[4] A KREM1_HUMAN KREMEN PROTEIN 1[288 aa] A 10.5
/28.7		 19
/19		 KREM1_HUMAN KREMEN PROTEIN 1
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
923 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
5ijr[1] D DMS
DIMETHYL SULFOXIDE[4 atoms] 		B 100.0
/100.0		 4
/4		 NRP1_HUMAN Neuropilin-1
5j1x[1] I DMS
DIMETHYL SULFOXIDE[4 atoms] 		D 100.0
/100.0		 4
/4		 NRP1_HUMAN Neuropilin-1
5jgq[1] C DMS
DIMETHYL SULFOXIDE[4 atoms] 		A 100.0
/100.0		 5
/5		 NRP1_HUMAN Neuropilin-1
7jjc[1] I PEG
DI(HYDROXYETHYL)ETHER[7 atoms] 		A 100.0
/100.0		 3
/3		 NRP1_HUMAN Neuropilin-1
7jjc[2] J PEG
DI(HYDROXYETHYL)ETHER[7 atoms] 		B 100.0
/100.0		 3
/4		 NRP1_HUMAN Neuropilin-1
7jjc[1] N PEG
DI(HYDROXYETHYL)ETHER[7 atoms] 		D 100.0
/100.0		 1
/1		 NRP1_HUMAN Neuropilin-1
4qds[1] D ACT
ACETATE ION[4 atoms] 		B 50.0
/55.1		 2
/2		 NRP2_HUMAN Neuropilin-2
4rn5[1] B ACT
ACETATE ION[4 atoms] 		A 100.0
/100.0		 4
/4		 NRP1_HUMAN Neuropilin-1
8pfe[1] E ACT
ACETATE ION[4 atoms] 		A 100.0
/96.1		 3
/3		 NRP1_HUMAN Neuropilin-1
5dq0[1] I MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms] 		A 83.3
/52.3		 6
/6		 NRP2_HUMAN Neuropilin-2
1d7p[3] B SO4
SULFATE ION[5 atoms] 		A 40.0
/40.9		 5
/5		 FA8_HUMAN COAGULATION FACTOR VIII PRECURSOR
1d7p[58] C SO4
SULFATE ION[5 atoms] 		A 50.0
/40.9		 2
/2		 FA8_HUMAN COAGULATION FACTOR VIII PRECURSOR
4gz9[2] F SO4
SULFATE ION[5 atoms] 		A 100.0
/91.6		 6
/6		 NRP1_MOUSE Neuropilin-1
4gz9[2] G SO4
SULFATE ION[5 atoms] 		A 100.0
/91.6		 3
/3		 NRP1_MOUSE Neuropilin-1
4qdq[2] H SO4
SULFATE ION[5 atoms] 		B 20.0
/52.0		 5
/5		 NRP2_HUMAN Neuropilin-2
6tjt[2] E SO4
SULFATE ION[5 atoms] 		A 25.0
/52.3		 4
/4		 NRP2_HUMAN Neuropilin-2
6tjt[2] F SO4
SULFATE ION[5 atoms] 		A 0.0
/52.3		 3
/3		 NRP2_HUMAN Neuropilin-2
5dn2[1] J DIO
1,4-DIETHYLENE DIOXIDE[6 atoms] 		D 20.0
/51.9		 5
/5		 NRP2_HUMAN Neuropilin-2
6tdb[1] K ACE
ACETYL GROUP[3 atoms] 		B 75.0
/51.9		 4
/4		 NRP2_HUMAN Neuropilin-2
1d7p[1] E GOL
GLYCEROL[6 atoms] 		A 66.7
/40.9		 3
/4		 FA8_HUMAN COAGULATION FACTOR VIII PRECURSOR
2qqi[1] B GOL
GLYCEROL[6 atoms] 		A 100.0
/100.0		 7
/7		 NRP1_HUMAN Neuropilin-1
2qqj[1] B GOL
GLYCEROL[6 atoms] 		A 40.0
/51.8		 5
/5		 NRP2_HUMAN Neuropilin-2
3i97[1] D GOL
GLYCEROL[6 atoms] 		A 100.0
/100.0		 3
/3		 NRP1_HUMAN Neuropilin-1
4gwm[1] R GOL
GLYCEROL[6 atoms] 		A 0.0
/31.7		 1
/4		 MEP1B_HUMAN Meprin A subunit beta
4mo3[1] B GOL
GLYCEROL[6 atoms] 		A 25.0
/38.9		 4
/4		 FA8_PIG Coagulation factor VIII
4qdq[2] C GOL
GLYCEROL[6 atoms] 		A 80.0
/52.0		 5
/5		 NRP2_HUMAN Neuropilin-2
4qdq[4] D GOL
GLYCEROL[6 atoms] 		A 0.0
/52.0		 3
/3		 NRP2_HUMAN Neuropilin-2
4qdq[2] E GOL
GLYCEROL[6 atoms] 		A 16.7
/52.0		 6
/6		 NRP2_HUMAN Neuropilin-2
4qds[2] C GOL
GLYCEROL[6 atoms] 		A 0.0
/54.7		 2
/2		 NRP2_HUMAN Neuropilin-2
4rn5[1] E GOL
GLYCEROL[6 atoms] 		A 100.0
/100.0		 6
/6		 NRP1_HUMAN Neuropilin-1
7jjc[1] L GOL
GLYCEROL[6 atoms] 		C 100.0
/100.0		 2
/2		 NRP1_HUMAN Neuropilin-1
7jjc[1] M GOL
GLYCEROL[6 atoms] 		C 100.0
/100.0		 4
/4		 NRP1_HUMAN Neuropilin-1
7jjc[1] O GOL
GLYCEROL[6 atoms] 		D 100.0
/100.0		 5
/5		 NRP1_HUMAN Neuropilin-1
9en2[1] F GOL
GLYCEROL[6 atoms] 		A 0.0
/38.2		 1
/2		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
9en2[1] G GOL
GLYCEROL[6 atoms] 		A 33.3
/38.2		 3
/3		 PCOC1_HUMAN Procollagen C-endopeptidase enhancer 1
2qqo[1] E TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] 		A 100.0
/53.4		 5
/5		 NRP2_HUMAN Neuropilin-2
3pof[7] E TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] 		A 50.0
/36.7		 4
/4		 MASP1_RAT Mannan-binding lectin serine protease 1
3poi[6] F TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] 		A 25.0
/36.7		 4
/4		 MASP1_RAT Mannan-binding lectin serine protease 1
3poi[6] F TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] 		B 0.0
/36.7		 1
/2		 MASP1_RAT Mannan-binding lectin serine protease 1
3poi[3] D NME
METHYLAMINE[2 atoms] 		A 75.0
/36.7		 4
/4		 MASP1_RAT Mannan-binding lectin serine protease 1
3poj[3] D NEH
ETHANAMINE[3 atoms] 		A 75.0
/36.7		 4
/4		 MASP1_RAT Mannan-binding lectin serine protease 1
1nt0[2] E EDO
1,2-ETHANEDIOL[4 atoms] 		A 33.3
/35.9		 3
/3		 MASP2_RAT mannose-binding protein associated serine protease..
2qqm[1] E EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/99.8		 4
/4		 NRP1_HUMAN Neuropilin-1
2qqm[3] F EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/99.8		 3
/3		 NRP1_HUMAN Neuropilin-1
2qqm[1] G EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/99.8		 5
/5		 NRP1_HUMAN Neuropilin-1
2qqm[1] I EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/99.8		 4
/4		 NRP1_HUMAN Neuropilin-1
2qqm[3] J EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/99.8		 5
/5		 NRP1_HUMAN Neuropilin-1
2qqn[1] D EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/100.0		 4
/4		 NRP1_HUMAN Neuropilin-1
2qqo[1] D EDO
1,2-ETHANEDIOL[4 atoms] 		A 16.7
/53.4		 6
/6		 NRP2_HUMAN Neuropilin-2
2qqo[1] G EDO
1,2-ETHANEDIOL[4 atoms] 		B 75.0
/53.2		 4
/4		 NRP2_HUMAN Neuropilin-2
2qqo[1] H EDO
1,2-ETHANEDIOL[4 atoms] 		B 0.0
/53.2		 4
/4		 NRP2_HUMAN Neuropilin-2
2qqo[1] I EDO
1,2-ETHANEDIOL[4 atoms] 		B 50.0
/53.2		 6
/6		 NRP2_HUMAN Neuropilin-2
2qqo[1] J EDO
1,2-ETHANEDIOL[4 atoms] 		B 60.0
/53.2		 5
/5		 NRP2_HUMAN Neuropilin-2
4bdv[1] I EDO
1,2-ETHANEDIOL[4 atoms] 		B 0.0
/36.7		 1
/3		 FA8_HUMAN FACTOR VIIIA LIGHT CHAIN
4gz9[2] H EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/91.6		 4
/4		 NRP1_MOUSE Neuropilin-1
4gz9[2] I EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/91.6		 2
/2		 NRP1_MOUSE Neuropilin-1
4gz9[2] J EDO
1,2-ETHANEDIOL[4 atoms] 		A 60.0
/91.6		 5
/5		 NRP1_MOUSE Neuropilin-1
5dq0[2] G EDO
1,2-ETHANEDIOL[4 atoms] 		A 0.0
/52.3		 2
/2		 NRP2_HUMAN Neuropilin-2
5y4m[1] B EDO
1,2-ETHANEDIOL[4 atoms] 		A 50.0
/37.4		 2
/3		 CNTP2_HUMAN human CASPR2 Disc domain
5y4m[1] D EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/37.4		 2
/2		 CNTP2_HUMAN human CASPR2 Disc domain
6tdb[1] H EDO
1,2-ETHANEDIOL[4 atoms] 		A 40.0
/51.9		 5
/5		 NRP2_HUMAN Neuropilin-2
6tdb[1] I EDO
1,2-ETHANEDIOL[4 atoms] 		B 66.7
/51.9		 6
/6		 NRP2_HUMAN Neuropilin-2
6tdb[3] J EDO
1,2-ETHANEDIOL[4 atoms] 		C 50.0
/51.9		 4
/4		 NRP2_HUMAN Neuropilin-2
6tjt[1] L EDO
1,2-ETHANEDIOL[4 atoms] 		B 100.0
/52.3		 4
/4		 NRP2_HUMAN Neuropilin-2
6tkk[1] D EDO
1,2-ETHANEDIOL[4 atoms] 		A 100.0
/100.0		 1
/1		 NRP1_HUMAN Neuropilin-1
7aq1[1] I EDO
1,2-ETHANEDIOL[4 atoms] 		A 0.0
/32.5		 1
/3		 MEP1B_HUMAN Meprin B subunit beta
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.