Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
30831 | 313 | 27 | O43765(SGTA_HUMAN) | RecName: Full=Small glutamine-rich tetratricopeptide repeat-containing protein alpha;AltName: Full=Alpha-SGT;AltName: Full=Vpu-binding protein; Short=UBP; |
QUERYSEQ |
MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCER AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIR SRTPSASNDDQQE |
313 | region | name | description |
1-313 | CHAIN | /note="Small glutamine-rich tetratricopeptide repeat- containing protein alpha" /id="PRO_0000106365" | |
91-124 | REPEAT | /note="TPR 1" | |
125-158 | REPEAT | /note="TPR 2" | |
159-192 | REPEAT | /note="TPR 3" | |
66-100 | REGION | /note="Disordered" | |
250-269 | REGION | /note="Disordered" | |
80-100 | COMPBIAS | /note="Basic and acidic residues" | |
1-313 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
313 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
2vyi | A | 100.0 | Q6FIA9_HUMAN SGTA PROTEIN | ||||
2vyi | B | 100.0 | Q6FIA9_HUMAN SGTA PROTEIN | ||||
4cpg | B | 100.0 | SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ALPHA | ||||
4cpg | A | 100.0 | SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ALPHA | ||||
4goe | A | 100.0 | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha | ||||
4gof | B | 100.0 | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha | ||||
4gof | A | 100.0 | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha | ||||
5lyn | A | 45.9 | SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-containing protein 2 | ||||
5lyn | B | 45.9 | SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-containing protein 2 | ||||
4god | A | 100.0 | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha | ||||
5lyp | A | 45.9 | SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-containing protein 2 | ||||
4god | B | 100.0 | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha | ||||
4goe | B | 100.0 | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-containing protein alpha | ||||
6hpg | D | 46.5 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
6hpg | A | 46.5 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
6q3q | B | 45.6 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
6q3q | A | 45.6 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
6hpg | C | 46.4 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
6hpg | E | 46.4 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
6hpg | B | 46.4 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
6hpg | F | 46.4 | OE64M_ARATH Outer envelope protein 64, mitochondrial | ||||
5jjt | B | 40.0 | PPP5_ARATH Serine/threonine-protein phosphatase 5 | ||||
7obe | A | 40.0 | PPP5_ARATH Isoform 2 of Serine/threonine-protein phosphatase 5 | ||||
7obe | B | 40.0 | PPP5_ARATH Isoform 2 of Serine/threonine-protein phosphatase 5 | ||||
5jjt | A | 40.8 | PPP5_ARATH Serine/threonine-protein phosphatase 5 | ||||
1na3 | B | 41.0 | designed protein CTPR2 | ||||
1na3 | A | 41.0 | designed protein CTPR2 | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6hpg | I | HS904_ARATH Heat shock protein 90-4[7 aa] | C | 60.0 /46.4 |
15 /15 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6hpg | K | HS904_ARATH Heat shock protein 90-4[7 aa] | E | 57.1 /46.4 |
14 /14 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6hpg | L | HS904_ARATH Heat shock protein 90-4[7 aa] | F | 57.1 /46.4 |
14 /14 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
5lyn | D | PRO-THR-VAL-GLU-GLU-VAL-ASP[7 aa] | A | 60.0 /45.9 |
15 /17 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | C | PRO-THR-VAL-GLU-GLU-VAL-ASP[7 aa] | B | 72.7 /45.9 |
11 /13 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
6hpg | G | HS904_ARATH Heat shock protein 90-4[8 aa] | A | 60.0 /46.5 |
15 /15 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6hpg | H | HS904_ARATH Heat shock protein 90-4[8 aa] | B | 53.3 /46.4 |
15 /15 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6hpg | J | HS904_ARATH Heat shock protein 90-4[8 aa] | D | 57.1 /46.5 |
14 /14 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | C | GLY-SER-LYS-MET-GLU-GLU-VAL-ASP[8 aa] | A | 60.0 /45.6 |
15 /15 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | D | GLY-SER-LYS-MET-GLU-GLU-VAL-ASP[8 aa] | A | 0.0 /45.6 |
1 /1 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | C | GLY-SER-LYS-MET-GLU-GLU-VAL-ASP[8 aa] | B | 0.0 /45.6 |
1 /1 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | D | GLY-SER-LYS-MET-GLU-GLU-VAL-ASP[8 aa] | B | 60.0 /45.6 |
15 /15 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1na3 | G |
IPT
1-methylethyl 1-thio-beta-D-galactopyranoside[15 a.. |
B | 20.0 /41.0 |
5 /5 |
designed protein CTPR2 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4goe | D |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof | D |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | E |
ZN
ZINC ION[1 atoms] |
A | 0.0 /45.9 |
1 /1 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | F |
ZN
ZINC ION[1 atoms] |
A | 0.0 /45.9 |
1 /1 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | G |
ZN
ZINC ION[1 atoms] |
A | 0.0 /45.9 |
2 /2 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | I |
ZN
ZINC ION[1 atoms] |
A | 100.0 /45.9 |
1 /1 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | F |
ZN
ZINC ION[1 atoms] |
B | 0.0 /45.9 |
1 /1 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | I |
ZN
ZINC ION[1 atoms] |
B | 100.0 /45.9 |
1 /1 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | J |
ZN
ZINC ION[1 atoms] |
B | 0.0 /45.9 |
1 /1 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | K |
ZN
ZINC ION[1 atoms] |
B | 0.0 /45.9 |
2 /2 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5jjt | E |
NI
NICKEL (II) ION[1 atoms] |
A | 0.0 /40.8 |
1 /6 |
PPP5_ARATH Serine/threonine-protein phosphatase 5 | |
5jjt | H |
NI
NICKEL (II) ION[1 atoms] |
B | 0.0 /40.0 |
1 /6 |
PPP5_ARATH Serine/threonine-protein phosphatase 5 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4cpg | B | SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONT.. | A | 100.0 /100.0 |
23 /23 |
SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONT.. | |
4cpg | A | SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONT.. | B | 100.0 /100.0 |
23 /23 |
SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONT.. | |
4god | B | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | A | 100.0 /100.0 |
18 /19 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4god | A | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | B | 100.0 /100.0 |
17 /17 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4goe | B | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | A | 100.0 /100.0 |
17 /18 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4goe | A | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | B | 100.0 /100.0 |
17 /18 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof | B | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | A | 100.0 /100.0 |
17 /18 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof | A | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | B | 100.0 /100.0 |
17 /18 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | B | SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | A | 50.0 /45.9 |
8 /8 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyn | A | SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | B | 44.4 /45.9 |
9 /9 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
6q3q | B | OE64M_ARATH Outer envelope protein 64, mitochondrial[121 aa] | A | 0.0 /45.6 |
9 /10 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | A | OE64M_ARATH Outer envelope protein 64, mitochondrial[121 aa] | B | 11.1 /45.6 |
9 /10 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4god | C |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 100.0 /100.0 |
4 /4 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4god | D |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 100.0 /100.0 |
3 /3 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4goe | C |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof | C |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof | E |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof | C |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
B | 100.0 /100.0 |
1 /1 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof | E |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
B | 100.0 /100.0 |
3 /3 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
5lyp | B |
BO4
BORATE ION[5 atoms] |
A | 33.3 /45.9 |
3 /3 |
SGT2_YEAST Small glutamine-rich tetratricopeptide repeat-cont.. | |
6q3q | E |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /45.6 |
5 /5 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | F |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /45.6 |
2 /2 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | G |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /45.6 |
2 /3 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | L |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /45.6 |
2 /2 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | F |
GOL
GLYCEROL[6 atoms] |
B | 0.0 /45.6 |
2 /2 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | K |
GOL
GLYCEROL[6 atoms] |
B | 0.0 /45.6 |
5 /5 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | L |
GOL
GLYCEROL[6 atoms] |
B | 0.0 /45.6 |
2 /2 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | N |
GOL
GLYCEROL[6 atoms] |
B | 50.0 /45.6 |
4 /4 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | H |
SO4
SULFATE ION[5 atoms] |
A | 25.0 /45.6 |
4 /4 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | I |
SO4
SULFATE ION[5 atoms] |
A | 80.0 /45.6 |
5 /5 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | J |
SO4
SULFATE ION[5 atoms] |
A | 25.0 /45.6 |
4 /4 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | O |
SO4
SULFATE ION[5 atoms] |
B | 25.0 /45.6 |
4 /4 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | P |
SO4
SULFATE ION[5 atoms] |
B | 80.0 /45.6 |
5 /5 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
6q3q | Q |
SO4
SULFATE ION[5 atoms] |
B | 0.0 /45.6 |
5 /5 |
OE64M_ARATH Outer envelope protein 64, mitochondrial | |
1na3 | C |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 33.3 /41.0 |
6 /6 |
designed protein CTPR2 | |
1na3 | D |
IPT
1-methylethyl 1-thio-beta-D-galactopyranoside[5 at.. |
A | 20.0 /41.0 |
5 /5 |
designed protein CTPR2 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |