Contact Molecules for Homologous Proteins | ||||
[Summary Bars] |
[SiteTable] |
|
[Back to Search Page] |
[Back to HOMCOS] |
[SupCon3D] |
[help] |
seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100] | [show] [download] [help] |
PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
29141 | 61 | 6 | P0DTC6(NS6_SARS2) | RecName: Full=ORF6 protein; Short=ORF6;AltName: Full=Accessory protein 6;AltName: Full=Non-structural protein 6; Short=ns6;AltName: Full=Protein X3; |
QUERYSEQ |
MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENKYSQLDEEQPMEID |
61 | region | name | description |
1-61 | CHAIN | /note="ORF6 protein" /id="PRO_0000449653" | |
18-24 | REGION | /note="Important for host Golgi localization" | |
60-61 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
61 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
7f60 | E | 100.0 | NS6_SARS2 ORF6 protein | ||||
7f60 | F | 100.0 | NS6_SARS2 ORF6 protein | ||||
7vph | J | 100.0 | NS6_SARS2 ORF6 protein | ||||
7vph | I | 100.0 | NS6_SARS2 ORF6 protein | ||||
7vph | K | 100.0 | NS6_SARS2 ORF6 protein | ||||
7vph | L | 100.0 | NS6_SARS2 ORF6 protein | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
61 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7f60 | A | RAE1L_HUMAN mRNA export factor[331 aa] | E | 100.0 /100.0 |
9 /9 |
NS6_SARS2 ORF6 protein | |
7f60 | B | RAE1L_HUMAN mRNA export factor[330 aa] | F | 100.0 /100.0 |
7 /7 |
NS6_SARS2 ORF6 protein | |
7vph | C | RAE1L_HUMAN mRNA export factor[337 aa] | I | 100.0 /100.0 |
9 /9 |
NS6_SARS2 ORF6 protein | |
7vph | E | RAE1L_HUMAN mRNA export factor[336 aa] | J | 100.0 /100.0 |
6 /6 |
NS6_SARS2 ORF6 protein | |
7vph | G | RAE1L_HUMAN mRNA export factor[336 aa] | K | 100.0 /100.0 |
8 /8 |
NS6_SARS2 ORF6 protein | |
7vph | A | RAE1L_HUMAN mRNA export factor[339 aa] | L | 100.0 /100.0 |
8 /8 |
NS6_SARS2 ORF6 protein | |
7vph | B | NUP98_HUMAN Isoform 3 of Nuclear pore complex protein Nup98-Nu.. | L | 100.0 /100.0 |
1 /1 |
NS6_SARS2 ORF6 protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |