Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
273794 | 275 | 10 | YP_009724391.1() | |
QUERYSEQ |
MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIVGVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMRLWLCWKCRSKNPLLYDANYFLCWH TNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLHSYFTSDYYQLYSTQLSTDTGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL |
275 | region | name | description |
1-275 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
275 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
6xdc | A | 100.0 | AP3A_SARS2 ORF3a protein | ||||
6xdc | B | 100.0 | AP3A_SARS2 ORF3a protein | ||||
7kjr | A | 100.0 | AP3A_SARS2 ORF3a protein | ||||
7kjr | B | 100.0 | AP3A_SARS2 ORF3a protein | ||||
8eqj | B | 100.0 | AP3A_SARS2 ORF3a protein | ||||
8eqj | A | 100.0 | AP3A_SARS2 ORF3a protein | ||||
8eqt | A | 100.0 | AP3A_SARS2 ORF3a protein | ||||
8eqt | B | 100.0 | AP3A_SARS2 ORF3a protein | ||||
8equ | B | 100.0 | AP3A_SARS2 ORF3a protein | ||||
8equ | A | 100.0 | AP3A_SARS2 ORF3a protein | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
275 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7kjr | C | APOA1_HUMAN Apolipoprotein A-I[31 aa] | A | 100.0 /100.0 |
6 /6 |
AP3A_SARS2 ORF3a protein | |
7kjr | D | APOA1_HUMAN Apolipoprotein A-I[31 aa] | A | 100.0 /100.0 |
6 /6 |
AP3A_SARS2 ORF3a protein | |
7kjr | C | APOA1_HUMAN Apolipoprotein A-I[31 aa] | B | 100.0 /100.0 |
5 /5 |
AP3A_SARS2 ORF3a protein | |
7kjr | D | APOA1_HUMAN Apolipoprotein A-I[31 aa] | B | 100.0 /100.0 |
6 /6 |
AP3A_SARS2 ORF3a protein | |
8equ | C | SAP_HUMAN Saposin-A[80 aa] | A | 100.0 /100.0 |
7 /7 |
AP3A_SARS2 ORF3a protein | |
8equ | F | SAP_HUMAN Saposin-A[80 aa] | A | 100.0 /100.0 |
1 /1 |
AP3A_SARS2 ORF3a protein | |
8equ | C | SAP_HUMAN Saposin-A[80 aa] | B | 100.0 /100.0 |
1 /1 |
AP3A_SARS2 ORF3a protein | |
8equ | F | SAP_HUMAN Saposin-A[80 aa] | B | 100.0 /100.0 |
5 /5 |
AP3A_SARS2 ORF3a protein | |
8equ | D | Saposin A, polyalanine model[79 aa] | A | 100.0 /100.0 |
1 /1 |
AP3A_SARS2 ORF3a protein | |
8equ | G | Saposin A, polyalanine model[79 aa] | B | 100.0 /100.0 |
1 /1 |
AP3A_SARS2 ORF3a protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
275 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7kjr | E |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
A | 100.0 /100.0 |
4 /4 |
AP3A_SARS2 ORF3a protein | |
7kjr | F |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
A | 100.0 /100.0 |
4 /4 |
AP3A_SARS2 ORF3a protein | |
7kjr | E |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
B | 100.0 /100.0 |
4 /4 |
AP3A_SARS2 ORF3a protein | |
7kjr | F |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
B | 100.0 /100.0 |
4 /4 |
AP3A_SARS2 ORF3a protein | |
8eqj | C |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
A | 100.0 /100.0 |
6 /6 |
AP3A_SARS2 ORF3a protein | |
8eqj | D |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[22 a.. |
A | 100.0 /100.0 |
7 /7 |
AP3A_SARS2 ORF3a protein | |
8eqj | E |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
A | 100.0 /100.0 |
3 /3 |
AP3A_SARS2 ORF3a protein | |
8eqj | C |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
B | 100.0 /100.0 |
3 /3 |
AP3A_SARS2 ORF3a protein | |
8eqj | E |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
B | 100.0 /100.0 |
6 /6 |
AP3A_SARS2 ORF3a protein | |
8eqj | F |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[22 a.. |
B | 100.0 /100.0 |
7 /7 |
AP3A_SARS2 ORF3a protein | |
8eqt | C |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[22 a.. |
A | 100.0 /100.0 |
7 /7 |
AP3A_SARS2 ORF3a protein | |
8eqt | D |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[19 a.. |
A | 100.0 /100.0 |
4 /4 |
AP3A_SARS2 ORF3a protein | |
8eqt | E |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[19 a.. |
A | 100.0 /100.0 |
2 /2 |
AP3A_SARS2 ORF3a protein | |
8eqt | D |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[19 a.. |
B | 100.0 /100.0 |
2 /2 |
AP3A_SARS2 ORF3a protein | |
8eqt | E |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[19 a.. |
B | 100.0 /100.0 |
4 /4 |
AP3A_SARS2 ORF3a protein | |
8eqt | F |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[22 a.. |
B | 100.0 /100.0 |
7 /7 |
AP3A_SARS2 ORF3a protein | |
8equ | I |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
A | 100.0 /100.0 |
5 /5 |
AP3A_SARS2 ORF3a protein | |
8equ | J |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
A | 100.0 /100.0 |
1 /1 |
AP3A_SARS2 ORF3a protein | |
8equ | I |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
B | 100.0 /100.0 |
1 /1 |
AP3A_SARS2 ORF3a protein | |
8equ | J |
PEE
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine[23 a.. |
B | 100.0 /100.0 |
5 /5 |
AP3A_SARS2 ORF3a protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
275 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6xdc | B | AP3A_SARS2 ORF3a protein[193 aa] | A | 100.0 /100.0 |
42 /42 |
AP3A_SARS2 ORF3a protein | |
6xdc | A | AP3A_SARS2 ORF3a protein[193 aa] | B | 100.0 /100.0 |
43 /43 |
AP3A_SARS2 ORF3a protein | |
7kjr | B | AP3A_SARS2 ORF3a protein[193 aa] | A | 100.0 /100.0 |
54 /54 |
AP3A_SARS2 ORF3a protein | |
7kjr | A | AP3A_SARS2 ORF3a protein[193 aa] | B | 100.0 /100.0 |
55 /55 |
AP3A_SARS2 ORF3a protein | |
8eqj | B | AP3A_SARS2 ORF3a protein[192 aa] | A | 100.0 /100.0 |
48 /48 |
AP3A_SARS2 ORF3a protein | |
8eqj | A | AP3A_SARS2 ORF3a protein[192 aa] | B | 100.0 /100.0 |
48 /48 |
AP3A_SARS2 ORF3a protein | |
8eqt | B | AP3A_SARS2 ORF3a protein[191 aa] | A | 100.0 /100.0 |
44 /44 |
AP3A_SARS2 ORF3a protein | |
8eqt | A | AP3A_SARS2 ORF3a protein[191 aa] | B | 100.0 /100.0 |
44 /44 |
AP3A_SARS2 ORF3a protein | |
8equ | B | AP3A_SARS2 ORF3a protein[191 aa] | A | 100.0 /100.0 |
48 /48 |
AP3A_SARS2 ORF3a protein | |
8equ | A | AP3A_SARS2 ORF3a protein[191 aa] | B | 100.0 /100.0 |
49 /49 |
AP3A_SARS2 ORF3a protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |