Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
2067674 | 313 | 10 | O43765(SGTA_HUMAN) | RecName: Full=Small glutamine-rich tetratricopeptide repeat-containing protein alpha;AltName: Full=Alpha-SGT;AltName: Full=Vpu-binding protein; Short=UBP; |
QUERYSEQ |
MDNKKRLAYAIIQFLHDQLRHGGLSSDAQESLEVAIQCLETAFGVTVEDSDLALPQTLPEIFEAAATGKEMPQDLRSPARTPPSEEDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCER AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDNETYKSNLKIAELKLREAPSPTGGVGSFDIAGLLNNPGFMSMASNLMNNPQIQQLMSGMISGGNNPLGTPGTSPSQNDLASLIQAGQQFAQQMQQQNPELIEQLRSQIR SRTPSASNDDQQE |
313 | region | name | description |
1-313 | CHAIN | /note="Small glutamine-rich tetratricopeptide repeat- containing protein alpha" /id="PRO_0000106365" | |
91-124 | REPEAT | /note="TPR 1" | |
125-158 | REPEAT | /note="TPR 2" | |
159-192 | REPEAT | /note="TPR 3" | |
66-100 | REGION | /note="Disordered" | |
250-269 | REGION | /note="Disordered" | |
80-100 | COMPBIAS | /note="Basic and acidic residues" | |
1-313 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
313 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
2vyi | A | 100.0 | Q6FIA9_HUMAN SGTA PROTEIN | ||||
4cpg | B | 100.0 | SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN ALPHA | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
METAL | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4goe[2] | D |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /100.0 |
2 /2 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4cpg[2] | B | SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONT.. | A | 100.0 /100.0 |
23 /23 |
SGTA_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONT.. | |
4god[6] | B | SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | A | 100.0 /100.0 |
18 /19 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
313 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4god[1] | C |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 100.0 /100.0 |
4 /4 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4god[1] | D |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 100.0 /100.0 |
3 /3 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4goe[3] | C |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof[1] | E |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
4gof[1] | C |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
B | 100.0 /100.0 |
1 /1 |
SGTA_HUMAN Small glutamine-rich tetratricopeptide repeat-cont.. | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |