Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
1837237 | 222 | 12 | YP_009724393.1() | |
QUERYSEQ |
MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLR IAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIALLVQ |
222 | region | name | description |
1-219 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
222 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
7vgr | F | 100.0 | VME1_SARS2 Membrane protein | ||||
7vgr | E | 100.0 | VME1_SARS2 Membrane protein | ||||
7vgs | A | 100.0 | VME1_SARS2 Membrane protein | ||||
7vgs | D | 100.0 | VME1_SARS2 Membrane protein | ||||
8ctk | A | 100.0 | VME1_SARS2 Membrane protein | ||||
8ctk | B | 100.0 | VME1_SARS2 Membrane protein | ||||
7y9b | A | 46.2 | VME1_BCHK5 Membrane protein | ||||
7y9b | C | 46.2 | VME1_BCHK5 Membrane protein | ||||
7y9b | B | 46.2 | VME1_BCHK5 Membrane protein | ||||
7y9b | D | 46.2 | VME1_BCHK5 Membrane protein | ||||
7y96 | B | 44.2 | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | ||||
7y96 | A | 44.0 | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
222 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7vgr | A | YN7756_1 Fab light chain[218 aa] | E | 100.0 /100.0 |
3 /3 |
VME1_SARS2 Membrane protein | |
7vgr | C | YN7756_1 Fab light chain[218 aa] | E | 100.0 /100.0 |
4 /4 |
VME1_SARS2 Membrane protein | |
7vgr | A | YN7756_1 Fab light chain[218 aa] | F | 100.0 /100.0 |
4 /4 |
VME1_SARS2 Membrane protein | |
7vgr | C | YN7756_1 Fab light chain[218 aa] | F | 100.0 /100.0 |
3 /3 |
VME1_SARS2 Membrane protein | |
7vgr | B | YN7756_1 Fab heavy chain[220 aa] | E | 100.0 /100.0 |
9 /9 |
VME1_SARS2 Membrane protein | |
7vgr | D | YN7756_1 Fab heavy chain[220 aa] | E | 100.0 /100.0 |
4 /4 |
VME1_SARS2 Membrane protein | |
7vgr | B | YN7756_1 Fab heavy chain[220 aa] | F | 100.0 /100.0 |
4 /4 |
VME1_SARS2 Membrane protein | |
7vgr | D | YN7756_1 Fab heavy chain[220 aa] | F | 100.0 /100.0 |
9 /9 |
VME1_SARS2 Membrane protein | |
7vgs | B | YN7717_9 Fab light chain[218 aa] | A | 100.0 /100.0 |
9 /9 |
VME1_SARS2 Membrane protein | |
7vgs | E | YN7717_9 Fab light chain[218 aa] | A | 100.0 /100.0 |
3 /3 |
VME1_SARS2 Membrane protein | |
7vgs | B | YN7717_9 Fab light chain[218 aa] | D | 100.0 /100.0 |
3 /3 |
VME1_SARS2 Membrane protein | |
7vgs | E | YN7717_9 Fab light chain[218 aa] | D | 100.0 /100.0 |
9 /9 |
VME1_SARS2 Membrane protein | |
7vgs | C | YN7717_9 Fab heavy chain[213 aa] | A | 100.0 /100.0 |
9 /9 |
VME1_SARS2 Membrane protein | |
7vgs | F | YN7717_9 Fab heavy chain[213 aa] | D | 100.0 /100.0 |
9 /9 |
VME1_SARS2 Membrane protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
222 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7y9b | E |
N8E
3,6,9,12,15-PENTAOXATRICOSAN-1-OL[24 atoms] |
A | 25.0 /46.2 |
4 /4 |
VME1_BCHK5 Membrane protein | |
7y9b | F |
N8E
3,6,9,12,15-PENTAOXATRICOSAN-1-OL[24 atoms] |
A | 50.0 /46.2 |
2 /2 |
VME1_BCHK5 Membrane protein | |
7y9b | G |
N8E
3,6,9,12,15-PENTAOXATRICOSAN-1-OL[24 atoms] |
C | 50.0 /46.2 |
2 /2 |
VME1_BCHK5 Membrane protein | |
7y9b | H |
N8E
3,6,9,12,15-PENTAOXATRICOSAN-1-OL[24 atoms] |
C | 42.9 /46.2 |
7 /7 |
VME1_BCHK5 Membrane protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
222 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7vgr | F | VME1_SARS2 Membrane protein[198 aa] | E | 100.0 /100.0 |
46 /46 |
VME1_SARS2 Membrane protein | |
7vgr | E | VME1_SARS2 Membrane protein[198 aa] | F | 100.0 /100.0 |
46 /46 |
VME1_SARS2 Membrane protein | |
7vgs | D | VME1_SARS2 Membrane protein[196 aa] | A | 100.0 /100.0 |
40 /40 |
VME1_SARS2 Membrane protein | |
7vgs | A | VME1_SARS2 Membrane protein[196 aa] | D | 100.0 /100.0 |
40 /40 |
VME1_SARS2 Membrane protein | |
8ctk | B | VME1_SARS2 Membrane protein[188 aa] | A | 100.0 /100.0 |
36 /36 |
VME1_SARS2 Membrane protein | |
8ctk | A | VME1_SARS2 Membrane protein[188 aa] | B | 100.0 /100.0 |
37 /37 |
VME1_SARS2 Membrane protein | |
7y9b | B | VME1_BCHK5 Membrane protein[187 aa] | A | 45.6 /46.2 |
57 /58 |
VME1_BCHK5 Membrane protein | |
7y9b | A | VME1_BCHK5 Membrane protein[187 aa] | B | 47.3 /46.2 |
55 /56 |
VME1_BCHK5 Membrane protein | |
7y9b | D | VME1_BCHK5 Membrane protein[187 aa] | C | 45.6 /46.2 |
57 /58 |
VME1_BCHK5 Membrane protein | |
7y9b | C | VME1_BCHK5 Membrane protein[187 aa] | D | 48.1 /46.2 |
54 /55 |
VME1_BCHK5 Membrane protein | |
7y96 | B | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[313 aa].. | A | 53.3 /44.0 |
30 /38 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | B | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[313 aa].. | A | 18.2 /44.0 |
11 /11 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | B | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[313 aa].. | A | 18.2 /44.0 |
11 /11 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | B | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[313 aa].. | A | 53.3 /44.0 |
30 /38 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | A | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[310 aa].. | B | 56.2 /44.2 |
32 /40 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | A | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[310 aa].. | B | 20.0 /44.2 |
5 /9 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | A | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[310 aa].. | B | 20.0 /44.2 |
5 /9 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | A | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[310 aa].. | B | 56.2 /44.2 |
32 /40 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | B | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[313 aa].. | B | 43.9 /44.2 |
41 /41 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
7y96 | B | GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein[313 aa].. | B | 43.9 /44.2 |
41 /41 |
GFP_AEQVI VME1_BCHK5 GFP_AEQVI Green fluorescent protein,Membrane protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |