Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
15960 | 98 | 20 | P59636(ORF9B_SARS) | RecName: Full=ORF9b protein;AltName: Full=Accessory protein 9b;AltName: Full=ORF-9b;AltName: Full=Protein 9b; |
QUERYSEQ |
MDPNQTNVVPPALHLVDPQIQLTITRMEDAMGQGQNSADPKVYPIILRLGSQLSLSMARRNLDSLEARAFQSTPIVVQMTKLATTEELPDEFVVVTAK |
98 | region | name | description |
1-98 | CHAIN | /note="ORF9b protein" /id="PRO_0000106137" | |
9-98 | DOMAIN | /note="9b" | |
1-4 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
98 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
2cme | B | 98.7 | Y5_CVHSA HYPOTHETICAL PROTEIN 5 | ||||
7ye8 | B | 77.3 | ORF9B_SARS2 ORF9b protein | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
98 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2cme[6] | B | Y5_CVHSA HYPOTHETICAL PROTEIN 5[79 aa] | A | 96.9 /98.7 |
32 /32 |
Y5_CVHSA HYPOTHETICAL PROTEIN 5 | |
7dhg[2] | A | TOM70_HUMAN Mitochondrial import receptor subunit TOM70[470 aa.. | B | 75.9 /75.0 |
29 /29 |
ORF9B_SARS2 ORF9b protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
98 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2cme[3] | I |
D10
DECANE[10 atoms] |
A | 100.0 /98.7 |
2 /2 |
Y5_CVHSA HYPOTHETICAL PROTEIN 5 | |
2cme[1] | I |
D10
DECANE[10 atoms] |
B | 100.0 /98.7 |
2 /2 |
Y5_CVHSA HYPOTHETICAL PROTEIN 5 | |
2cme[2] | J |
D10
DECANE[10 atoms] |
C | 100.0 /98.7 |
3 /3 |
Y5_CVHSA HYPOTHETICAL PROTEIN 5 | |
2cme[1] | K |
D10
DECANE[10 atoms] |
E | 100.0 /98.7 |
2 /2 |
Y5_CVHSA HYPOTHETICAL PROTEIN 5 | |
6z4u[1] | C |
15P
POLYETHYLENE GLYCOL (N=34)[14 atoms] |
B | 100.0 /82.4 |
7 /7 |
ORF9B_SARS2 Protein 9b | |
7ye7[5] | F |
OCT
N-OCTANE[8 atoms] |
C | 100.0 /83.1 |
3 /3 |
ORF9B_SARS2 ORF9b protein | |
7ye7[1] | F |
OCT
N-OCTANE[8 atoms] |
D | 100.0 /82.2 |
1 /1 |
ORF9B_SARS2 ORF9b protein | |
7ye7[1] | E |
DD9
nonane[9 atoms] |
A | 100.0 /82.4 |
1 /1 |
ORF9B_SARS2 ORF9b protein | |
7ye7[1] | E |
DD9
nonane[9 atoms] |
B | 100.0 /79.2 |
2 /2 |
ORF9B_SARS2 ORF9b protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
98 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2cme[2] | D | Y5_CVHSA HYPOTHETICAL PROTEIN 5[76 aa] | C | 96.9 /98.7 |
32 /32 |
Y5_CVHSA HYPOTHETICAL PROTEIN 5 | |
7ye7[1] | B | ORF9B_SARS2 ORF9b protein[78 aa] | A | 81.2 /82.4 |
32 /32 |
ORF9B_SARS2 ORF9b protein | |
6z4u[8] | B | ORF9B_SARS2 Protein 9b[82 aa] | A | 78.8 /77.4 |
33 /33 |
ORF9B_SARS2 Protein 9b | |
7ye8[1] | B | ORF9B_SARS2 ORF9b protein[88 aa] | A | 79.4 /80.8 |
34 /34 |
ORF9B_SARS2 ORF9b protein | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |