Contact Molecules for Homologous Proteins | ||||
[Summary Bars] |
[SiteTable] |
|
[Back to Search Page] |
[Back to HOMCOS] |
[SupCon3D] |
[help] |
seq_id(%): [0] [30] [40] [50] [60] [70] [80] [90] [95] [100] | [show] [download] [help] |
PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
1166733 | 212 | 22 | P05231(IL6_HUMAN) | RecName: Full=Interleukin-6 ; Short=IL-6;AltName: Full=B-cell stimulatory factor 2; Short=BSF-2;AltName: Full=CTL differentiation factor; Short=CDF;AltName: Full=Hybridoma growth factor;AltName: Full=Interferon beta-2; Short=IFN-beta-2;Flags: Precursor; |
QUERYSEQ |
MNSFSTSAFGPVAFSLGLLLVLPAAFPAPVPPGEDSKDVAAPHRQPLTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGFNEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVL IQFLQKKAKNLDAITTPDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM |
212 | region | name | description |
1-29 | SIGNAL | ECO:0000269|PubMed:2610854, ECO:0000269|PubMed:3279116" | |
30-212 | CHAIN | /note="Interleukin-6" /id="PRO_0000015582" | |
1-43 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
212 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
4cni | C | 100.0 | IL6_HUMAN INTERLEUKIN-6 | ||||
4cni | D | 100.0 | IL6_HUMAN INTERLEUKIN-6 | ||||
8d82 | E | 100.0 | IL6_HUMAN Interleukin-6 | ||||
8d82 | B | 100.0 | IL6_HUMAN Interleukin-6 | ||||
4j4l | D | 100.0 | IL6_HUMAN Interleukin-6 | ||||
2il6 | A | 100.0 | IL6_HUMAN INTERLEUKIN-6 | ||||
1il6 | A | 100.0 | IL6_HUMAN INTERLEUKIN-6 | ||||
1p9m | B | 100.0 | IL6_HUMAN Interleukin-6 | ||||
5fuc | B | 100.0 | IL6_HUMAN INTERLEUKIN-6 | ||||
7nxz | A | 100.0 | IL6_HUMAN Interleukin-6 | ||||
1alu | A | 100.0 | IL6_HUMAN INTERLEUKIN-6 | ||||
8qy6 | D | 100.0 | IL6_HUMAN Interleukin-6 | ||||
8qy6 | B | 100.0 | IL6_HUMAN Interleukin-6 | ||||
8qy5 | B | 100.0 | IL6_HUMAN Interleukin-6 | ||||
8qy5 | D | 100.0 | IL6_HUMAN Interleukin-6 | ||||
5fuc | A | 99.3 | IL6_HUMAN INTERLEUKIN-6 | ||||
4o9h | A | 100.0 | IL6_HUMAN Interleukin-6 | ||||
4j4l | C | 99.4 | IL6_HUMAN Interleukin-6 | ||||
4ni9 | B | 100.0 | IL6_HUMAN Interleukin-6 | ||||
4ni7 | A | 100.0 | IL6_HUMAN Interleukin-6 | ||||
4zs7 | A | 100.0 | IL6_HUMAN Interleukin-6 | ||||
4ni9 | C | 100.0 | IL6_HUMAN Interleukin-6 | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
212 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1p9m | A | IL6RB_HUMAN Interleukin-6 receptor beta chain[298 aa] | B | 100.0 /100.0 |
12 /12 |
IL6_HUMAN Interleukin-6 | |
1p9m | A | IL6RB_HUMAN Interleukin-6 receptor beta chain[298 aa] | B | 100.0 /100.0 |
14 /14 |
IL6_HUMAN Interleukin-6 | |
1p9m | A | IL6RB_HUMAN Interleukin-6 receptor beta chain[298 aa] | B | 100.0 /100.0 |
14 /14 |
IL6_HUMAN Interleukin-6 | |
1p9m | A | IL6RB_HUMAN Interleukin-6 receptor beta chain[298 aa] | B | 100.0 /100.0 |
12 /12 |
IL6_HUMAN Interleukin-6 | |
1p9m | C | IL6RA_HUMAN Interleukin-6 receptor alpha chain[201 aa] | B | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
1p9m | C | IL6RA_HUMAN Interleukin-6 receptor alpha chain[201 aa] | B | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
5fuc | D | D6R9R8_HUMAN IL6RA_HUMAN INTERLEUKIN-6 RECEPTOR SUBUNIT ALPHA, INTERLEUKIN-.. | A | 100.0 /99.3 |
14 /14 |
IL6_HUMAN INTERLEUKIN-6 | |
5fuc | C | D6R9R8_HUMAN IL6RA_HUMAN INTERLEUKIN-6 RECEPTOR SUBUNIT ALPHA, INTERLEUKIN-.. | B | 100.0 /100.0 |
19 /19 |
IL6_HUMAN INTERLEUKIN-6 | |
8qy5 | C | IL6RA_HUMAN Interleukin-6 receptor subunit alpha[201 aa] | B | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
8qy5 | E | IL6RA_HUMAN Interleukin-6 receptor subunit alpha[201 aa] | D | 100.0 /100.0 |
12 /12 |
IL6_HUMAN Interleukin-6 | |
8qy6 | C | IL6RA_HUMAN Interleukin-6 receptor subunit alpha[201 aa] | B | 100.0 /100.0 |
10 /10 |
IL6_HUMAN Interleukin-6 | |
8qy6 | E | IL6RA_HUMAN Interleukin-6 receptor subunit alpha[201 aa] | D | 100.0 /100.0 |
11 /11 |
IL6_HUMAN Interleukin-6 | |
4cni | E | OLOKIZUMAB HEAVY CHAIN, FAB PORTION[219 aa] | C | 100.0 /100.0 |
13 /13 |
IL6_HUMAN INTERLEUKIN-6 | |
4cni | A | OLOKIZUMAB HEAVY CHAIN, FAB PORTION[220 aa] | D | 100.0 /100.0 |
13 /13 |
IL6_HUMAN INTERLEUKIN-6 | |
4cni | F | OLOKIZUMAB LIGHT CHAIN, FAB PORTION[214 aa] | C | 100.0 /100.0 |
6 /6 |
IL6_HUMAN INTERLEUKIN-6 | |
4cni | B | OLOKIZUMAB LIGHT CHAIN, FAB PORTION[214 aa] | D | 100.0 /100.0 |
6 /6 |
IL6_HUMAN INTERLEUKIN-6 | |
4j4l | A | A4L9V2_LISMN Q4G1L3_EPTBU Internalin B,REPEAT MODULES,Variable lymphocyte re.. | C | 100.0 /99.4 |
18 /19 |
IL6_HUMAN Interleukin-6 | |
4j4l | B | A4L9V2_LISMN Q4G1L3_EPTBU Internalin B,REPEAT MODULES,Variable lymphocyte re.. | D | 100.0 /100.0 |
18 /18 |
IL6_HUMAN Interleukin-6 | |
4o9h | B | Heavy Chain of the Camelid Fab fragment 61H7[200 a.. | A | 100.0 /100.0 |
10 /10 |
IL6_HUMAN Interleukin-6 | |
4o9h | C | Light Chain of the Camelid Fab fragment 61H7[211 a.. | A | 100.0 /100.0 |
7 /7 |
IL6_HUMAN Interleukin-6 | |
4zs7 | B | Llama Fab fragment 68F2 heavy chain[222 aa] | A | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
4zs7 | C | Llama Fab fragment 68F2 light chain[210 aa] | A | 100.0 /100.0 |
11 /11 |
IL6_HUMAN Interleukin-6 | |
5fuc | E | VHH6[110 aa] | B | 100.0 /100.0 |
7 /7 |
IL6_HUMAN INTERLEUKIN-6 | |
8d82 | A | IL6RA_HUMAN Soluble interleukin-6 receptor subunit alpha[296 a.. | B | 100.0 /100.0 |
14 /14 |
IL6_HUMAN Interleukin-6 | |
8d82 | D | IL6RA_HUMAN Soluble interleukin-6 receptor subunit alpha[296 a.. | E | 100.0 /100.0 |
15 /15 |
IL6_HUMAN Interleukin-6 | |
8d82 | C | IL6RB_HUMAN Interleukin-6 receptor subunit beta[589 aa] | B | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
8d82 | F | IL6RB_HUMAN Interleukin-6 receptor subunit beta[589 aa] | B | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
8d82 | C | IL6RB_HUMAN Interleukin-6 receptor subunit beta[589 aa] | E | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
8d82 | F | IL6RB_HUMAN Interleukin-6 receptor subunit beta[589 aa] | E | 100.0 /100.0 |
13 /13 |
IL6_HUMAN Interleukin-6 | |
8qy5 | A | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | B | 100.0 /100.0 |
11 /11 |
IL6_HUMAN Interleukin-6 | |
8qy5 | F | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | B | 100.0 /100.0 |
15 /15 |
IL6_HUMAN Interleukin-6 | |
8qy5 | A | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | D | 100.0 /100.0 |
18 /18 |
IL6_HUMAN Interleukin-6 | |
8qy5 | F | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | D | 100.0 /100.0 |
10 /10 |
IL6_HUMAN Interleukin-6 | |
8qy6 | A | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | B | 100.0 /100.0 |
10 /10 |
IL6_HUMAN Interleukin-6 | |
8qy6 | F | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | B | 100.0 /100.0 |
11 /11 |
IL6_HUMAN Interleukin-6 | |
8qy6 | A | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | D | 100.0 /100.0 |
16 /16 |
IL6_HUMAN Interleukin-6 | |
8qy6 | F | IL6RB_MOUSE Interleukin-6 receptor subunit beta[584 aa] | D | 100.0 /100.0 |
8 /8 |
IL6_HUMAN Interleukin-6 | |
5fuc | F | VHH6[124 aa] | A | 90.0 /99.3 |
10 /11 |
IL6_HUMAN INTERLEUKIN-6 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
NUCLEOTIDE | |||||||
212 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4ni7 | B | SOMAmer SL1025 | A | 100.0 /100.0 |
19 /19 |
IL6_HUMAN Interleukin-6 | |
4ni9 | A | SOMAmer SL1025 | B | 100.0 /100.0 |
22 /22 |
IL6_HUMAN Interleukin-6 | |
4ni9 | D | SOMAmer SL1025 | B | 100.0 /100.0 |
5 /5 |
IL6_HUMAN Interleukin-6 | |
4ni9 | A | SOMAmer SL1025 | C | 100.0 /100.0 |
5 /5 |
IL6_HUMAN Interleukin-6 | |
4ni9 | D | SOMAmer SL1025 | C | 100.0 /100.0 |
18 /18 |
IL6_HUMAN Interleukin-6 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
212 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1alu | A | IL6_HUMAN INTERLEUKIN-6[157 aa] | A | 100.0 /100.0 |
22 /22 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | A | IL6_HUMAN INTERLEUKIN-6[157 aa] | A | 100.0 /100.0 |
11 /11 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | A | IL6_HUMAN INTERLEUKIN-6[157 aa] | A | 100.0 /100.0 |
22 /22 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | A | IL6_HUMAN INTERLEUKIN-6[157 aa] | A | 100.0 /100.0 |
11 /11 |
IL6_HUMAN INTERLEUKIN-6 | |
4ni9 | C | IL6_HUMAN Interleukin-6[148 aa] | B | 100.0 /100.0 |
3 /3 |
IL6_HUMAN Interleukin-6 | |
4ni9 | B | IL6_HUMAN Interleukin-6[144 aa] | C | 100.0 /100.0 |
3 /3 |
IL6_HUMAN Interleukin-6 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
212 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1alu | B |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
3 /3 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | B |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | B |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
3 /3 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | B |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | B |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
3 /3 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
1 /1 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | D |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | D |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | D |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
2 /2 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | E |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | E |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | E |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
IL6_HUMAN INTERLEUKIN-6 | |
4cni | H |
SO4
SULFATE ION[5 atoms] |
C | 100.0 /100.0 |
4 /4 |
IL6_HUMAN INTERLEUKIN-6 | |
4cni | I |
SO4
SULFATE ION[5 atoms] |
C | 100.0 /100.0 |
3 /3 |
IL6_HUMAN INTERLEUKIN-6 | |
4cni | J |
SO4
SULFATE ION[5 atoms] |
D | 100.0 /100.0 |
3 /3 |
IL6_HUMAN INTERLEUKIN-6 | |
4cni | K |
SO4
SULFATE ION[5 atoms] |
D | 100.0 /100.0 |
3 /3 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | F |
TLA
L(+)-TARTARIC ACID[10 atoms] |
A | 100.0 /100.0 |
4 /4 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | F |
TLA
L(+)-TARTARIC ACID[10 atoms] |
A | 100.0 /100.0 |
4 /4 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | F |
TLA
L(+)-TARTARIC ACID[10 atoms] |
A | 100.0 /100.0 |
4 /4 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | F |
TLA
L(+)-TARTARIC ACID[10 atoms] |
A | 100.0 /100.0 |
4 /4 |
IL6_HUMAN INTERLEUKIN-6 | |
1alu | F |
TLA
L(+)-TARTARIC ACID[10 atoms] |
A | 100.0 /100.0 |
4 /4 |
IL6_HUMAN INTERLEUKIN-6 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |