Contact Molecules for Homologous Proteins


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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
3177277 1817 224 P52948(NUP98_HUMAN) RecName: Full=Nuclear pore complex protein Nup98-Nup96 ; EC=3.4.21.- ;Contains: RecName: Full=Nuclear pore complex protein Nup98; AltName: Full=98 kDa nucleoporin; AltName: Full=Nucleoporin Nup98; Short=Nup98;Contains: RecName: Full=Nuclear pore complex protein Nup96; AltName: Full=96 kDa nucleoporin; AltName: Full=Nucleoporin Nup96; Short=Nup96;Flags: Precursor;
QUERYSEQ
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPGGLFGTSSFSQPATSTSTGFGFGTSTGTANTLFGTASTGTSLFSSQNNAFAQNKPTGFGNFGTSTSSGGLFGTTNTTSNPFGSTSGSLFGP
SSFTAAPTGTTIKFNPPTGTDTMVKAGVSTNISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGLFSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTIGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQTNTGFGAVGSTLFGNNKLTTFGSSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNTSGNSIFGSKPAPGTLGTGLGAGFGTALGAGQASLFG
NNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQQAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNRDSENLASPSEYPENGERFSFLSKPVDENHQQDGDEDSLVSHFYTNPIAKPIPQTPESAGNKHSNSNSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDREEIENNSYHMHPAGIILTKVGYYTIPSMDDL
AKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPSKTS
TKKLKTAPLPPASQTTPLQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDTMLEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLTDEEDVDMALDQRFSRLPSKADTSQEICSPRLPISASHSSKTRSLVGGLLQ
SKFTSGAFLSPSVSVQECRTPRAASLMNIPSTSSWSVPPPLTSVFTMPSPAPEVPLKTVGTRRQLGLVPREKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKPLTESPFKVHLEK
LSLRQRKPDEDMKLYQTPLELKLKHSTVHVDELCPLIVPNLGVAVIHDYADWVKEASGDLPEAQIVKHWSLTWTLCEALWGHLKELDSQLNEPREYIQILERRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFSYLTGKRISEACSLA
QQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQADSFIQDERLRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQNTSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYS
DRHYDLNQLLEPRSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHIDNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAVRAHMESDKHLEALCLFKAEHWNRCHKLI
IRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIEMLRHIQQVDCSGNDLEQLHIKVTSLCSRIEQIQCYSAKDRLAQSDMAKRVANLLRVVLSLHHPPDRTSDSTPDPQRVPLRLLAPHIGRLPMPEDYAMDE
LRSLTQSYLRELAVGSL
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P52948(NUP98_HUMAN)]

1817
region name description
1-880 CHAIN /note="Nuclear pore complex protein Nup98" /id="PRO_0000019929"
881-1817 CHAIN /note="Nuclear pore complex protein Nup96" /id="PRO_0000019930"
738-880 DOMAIN /note="Peptidase S59"
1-156 REGION /note="FG repeats 1"
157-213 REGION /note="GLEBS; interaction with RAE1"
214-480 REGION /note="FG repeats 2"
512-535 REGION /note="Disordered"
614-633 REGION /note="Disordered"
662-682 REGION /note="Disordered"
886-937 REGION /note="Disordered"
886-901 COMPBIAS /note="Basic and acidic residues"
902-921 COMPBIAS /note="Polar residues"
881-881 ACT_SITE /note="Nucleophile" ECO:0000269|PubMed:18287282"
1-1817 DISORDER predicted by DISOPRED

MONOMER
1817
pdb_id a1 identity[%]2 description
7r5j KB 100.0 NUP98_HUMAN Nuclear pore complex protein Nup96
6lk8 G 62.2 A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
2q5y A 100.0 NUP98_HUMAN Nuclear pore complex protein Nup98
7byf F 100.0 Q3TPG3_MOUSE Peptidase S59 domain-containing protein
7q65 L 100.0 NUP98_HUMAN Nuclear pore complex protein Nup98
8ci8 X 100.0 NUP98_HUMAN Nuclear pore complex protein Nup98
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
1817 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1ko6[2] B NU98_HUMAN Nuclear Pore Complex Protein Nup98[6 aa] A 100.0
/100.0
11
/11
NUP98_HUMAN Nuclear Pore Complex Protein Nup98
1ko6[1] B NU98_HUMAN Nuclear Pore Complex Protein Nup98[6 aa] C 100.0
/100.0
1
/1
NUP98_HUMAN Nuclear Pore Complex Protein Nup98
2q5y[2] B NUP98_HUMAN Nuclear pore complex protein Nup96[3 aa] A 100.0
/100.0
11
/11
NUP98_HUMAN Nuclear pore complex protein Nup98
3bg0[8] A SEC13_HUMAN Protein SEC13 homolog[283 aa] B 22.2
/26.4
9
/39
NU145_YEAST Nucleoporin NUP145
3bg0[4] E SEC13_HUMAN Protein SEC13 homolog[283 aa] B 0.0
/26.4
2
/2
NU145_YEAST Nucleoporin NUP145
5a9q[32] G SEC13_HUMAN PROTEIN SEC13 HOMOLOG[285 aa] F 100.0
/100.0
8
/8
NUP98_HUMAN NUCLEAR PORE COMPLEX PROTEIN NUP96
7peq[32] D SEC13_HUMAN Protein SEC13 homolog[285 aa] C 100.0
/100.0
13
/13
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[64] OB SEC13_HUMAN Protein SEC13 homolog[301 aa] KB 100.0
/100.0
59
/59
NUP98_HUMAN Nuclear pore complex protein Nup96
3mmy[15] A RAE1L_HUMAN mRNA export factor[354 aa] B 100.0
/100.0
29
/29
NUP98_HUMAN Nuclear pore complex protein Nup98
7f60[4] B RAE1L_HUMAN mRNA export factor[330 aa] C 100.0
/100.0
25
/25
NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96
4owr[1] C MATRX_VSIVS Matrix protein[176 aa] B 100.0
/100.0
3
/3
NUP98_HUMAN Nuclear pore complex protein Nup98-Nup96
5a9q[32] E NU107_HUMAN NUCLEAR PORE COMPLEX PROTEIN NUP107[660 aa] F 100.0
/100.0
7
/7
NUP98_HUMAN NUCLEAR PORE COMPLEX PROTEIN NUP96
7byf[2] D O41931_MHV68 10 protein[399 aa] B 100.0
/100.0
2
/2
Q3TPG3_MOUSE Peptidase S59 domain-containing protein
7mni[2] A NUP88_HUMAN Nuclear pore complex protein Nup88[409 aa] B 100.0
/100.0
27
/27
NUP98-2_HUMAN Nuclear pore complex protein Nup98
7peq[24] B NU107_HUMAN Nuclear pore complex protein Nup107[678 aa] C 100.0
/100.0
4
/4
NUP98_HUMAN Nuclear pore complex protein Nup96
7peq[8] F NUP85_HUMAN Nuclear pore complex protein Nup85[632 aa] C 100.0
/100.0
1
/1
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[32] WB NUP85_HUMAN Nuclear pore complex protein Nup85[655 aa] LB 100.0
/100.0
2
/2
NUP98_HUMAN Nuclear pore complex protein Nup96
7peq[32] H NU160_HUMAN Nuclear pore complex protein Nup160[996 aa] C 100.0
/100.0
32
/32
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[24] A RBP2_HUMAN E3 SUMO-protein ligase RanBP2[756 aa] KB 100.0
/100.0
1
/1
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[16] C RBP2_HUMAN E3 SUMO-protein ligase RanBP2[756 aa] KB 100.0
/100.0
3
/3
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[8] D RBP2_HUMAN E3 SUMO-protein ligase RanBP2[756 aa] LB 100.0
/100.0
5
/5
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5k[8] B RBP2_HUMAN E3 SUMO-protein ligase RanBP2[756 aa] KB 100.0
/100.0
7
/7
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5k[8] D RBP2_HUMAN E3 SUMO-protein ligase RanBP2[756 aa] LB 100.0
/100.0
4
/4
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[64] EC NU160_HUMAN Nuclear pore complex protein Nup160[1399 aa] KB 100.0
/100.0
30
/30
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[64] GB NU107_HUMAN Nuclear pore complex protein Nup107[782 aa] KB 100.0
/100.0
22
/22
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[32] HB NU107_HUMAN Nuclear pore complex protein Nup107[782 aa] KB 100.0
/100.0
4
/4
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[24] U NUP93_HUMAN Nuclear pore complex protein Nup93[726 aa] KB 100.0
/100.0
15
/15
NUP98_HUMAN Nuclear pore complex protein Nup96
7r5j[8] V NUP93_HUMAN Nuclear pore complex protein Nup93[726 aa] MB 100.0
/100.0
4
/4
NUP98_HUMAN Nuclear pore complex protein Nup96
7vpg[2] K NS6_SARS ORF6 protein[10 aa] F 100.0
/100.0
1
/1
NUP98_HUMAN Isoform 3 of Nuclear pore complex protein Nup98-Nu..
7vph[1] L NS6_SARS2 ORF6 protein[9 aa] B 100.0
/100.0
1
/1
NUP98_HUMAN Isoform 3 of Nuclear pore complex protein Nup98-Nu..
3pbp[4] A NUP82_YEAST Nucleoporin NUP82[438 aa] B 35.0
/30.4
20
/22
NU116_YEAST Nucleoporin NUP116/NSP116
3tkn[3] A NUP82_YEAST Nucleoporin NUP82[451 aa] C 95.2
/98.0
21
/21
Q6PFD9_MOUSE Nucleoporin 98
7now[2] A Anti-Nup98 nanobody MS98-27[129 aa] B 88.9
/72.8
18
/18
A0A6I8SCP2_XENTR Nuclear pore complex protein Nup98
7nqa[2] B Anti-Nup98 Nanobody MS98-6[124 aa] A 68.2
/72.8
22
/22
A0A6I8SCP2_XENTR Nuclear pore complex protein Nup98-Nup96
5e0q[1] A Anti-Nup98 Nanobody TP377[126 aa] B 78.9
/72.2
19
/19
J7I6Y1_XENTR Nuclear pore complex protein Nup98-Nup96
7fik[1] I A2RV69_XENLA Nuclear pore complex protein[729 aa] CA 60.0
/63.9
5
/5
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7fik[1] I A2RV69_XENLA Nuclear pore complex protein[729 aa] G 76.5
/66.3
17
/17
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
6lk8[2] DA Q7ZYJ8_XENLA GATOR complex protein SEC13[287 aa] CA 53.8
/62.0
13
/13
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7fik[2] DA Q6GNX0_XENLA Protein SEC13 homolog[288 aa] CA 68.9
/63.9
45
/45
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7tdz[2] G Q7ZYJ8_XENLA Protein SEC13 homolog[306 aa] AA 56.0
/64.0
50
/50
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7vci[6] G Q7ZYJ8_XENLA GATOR complex protein SEC13[294 aa] F 55.8
/64.0
43
/43
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
6lk8[6] EA A2RV69_XENLA Nuclear pore complex protein[727 aa] CA 80.0
/62.0
10
/10
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7tdz[2] A A2RV69_XENLA Nuclear pore complex protein[789 aa] AA 100.0
/64.0
7
/7
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7tdz[1] A A2RV69_XENLA Nuclear pore complex protein[789 aa] BA 54.5
/64.0
11
/11
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7vci[3] Q A2RV69_XENLA Nuclear pore complex protein[780 aa] F 66.7
/64.0
12
/12
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7fik[1] E outer Nup160[1310 aa] G 80.0
/66.3
10
/10
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7wb4[1] H A0A1L8GIX3_XENLA outer Nup160[1363 aa] M 0.0
/63.6
1
/1
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7wb4[1] I A0A1L8GIX3_XENLA outer Nup160[1310 aa] O 83.3
/64.7
6
/6
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7vop[1] U NUP93_XENLA Nuclear pore complex protein Nup93[654 aa] F 69.2
/62.8
13
/14
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7wb4[1] R NUP93_XENLA Nuclear pore complex protein Nup93[641 aa] O 100.0
/64.7
1
/1
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7wb4[1] Z ELYS_XENLA Protein ELYS[910 aa] O 80.0
/64.7
5
/5
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7tdz[2] X A0A1L8GIX3_XENLA Nup160[1352 aa] AA 80.0
/64.0
15
/15
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7vci[1] T ELYS_XENLA Protein ELYS[1013 aa] F 100.0
/64.0
10
/10
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7vci[1] U NUP93_XENLA Nuclear pore complex protein Nup93[820 aa] F 70.6
/64.0
17
/17
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7fik[1] AA outer Nup160[1247 aa] CA 80.0
/63.9
5
/5
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7fik[1] P NUP93_XENLA Nuclear pore complex protein Nup93[593 aa] CA 66.7
/63.9
6
/6
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7fik[1] U A2RV69_XENLA Nuclear pore complex protein[673 aa] CA 83.3
/63.9
6
/6
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7fik[1] K A0A1L8HGL2_XENLA Nup358 complex, clamps[697 aa] CA 50.0
/63.9
2
/2
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7fik[1] K A0A1L8HGL2_XENLA Nup358 complex, clamps[697 aa] G 66.7
/66.3
3
/3
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7fik[1] M A0A1L8HGL2_XENLA Nup358 complex, clamps[654 aa] G 50.0
/66.3
2
/2
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup98-Nup96
7tdz[1] U A0A1L8HGL2_XENLA Nup358[798 aa] AA 33.3
/64.0
18
/18
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7tdz[1] R A0A1L8HGL2_XENLA Nup358[798 aa] BA 5.3
/64.0
19
/19
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7tdz[1] T A0A1L8HGL2_XENLA Nup358[798 aa] BA 100.0
/64.0
1
/1
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
7vop[1] V A0A1L8HGL2_XENLA Nup358[772 aa] F 42.9
/62.8
7
/7
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7vop[2] Y A0A1L8HGL2_XENLA Nup358[761 aa] F 37.5
/62.8
24
/24
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7vop[2] Z A0A1L8HGL2_XENLA Nup358[758 aa] F 0.0
/62.8
4
/4
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7vci[4] D Nup160[1394 aa] F 90.0
/64.0
20
/20
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7vci[1] A NUP85_XENLA Nuclear pore complex protein Nup85[653 aa] O 33.3
/62.9
6
/6
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7vci[2] B Q05AW3_XENLA MGC154553 protein[375 aa] O 28.6
/62.9
7
/7
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
7vci[2] S Q642R6_XENLA MGC83295 protein[2011 aa] O 31.2
/62.9
16
/16
A0A1B8XZT4_XENTR Nuclear pore complex protein Nup96
6lk8[1] A Q642R6_XENLA MGC83295 protein[1409 aa] G 75.0
/62.2
4
/4
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
6lk8[1] AA A0A1L8GIX3_XENLA outer Nup160[1109 aa] CA 77.8
/62.0
9
/9
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
6lk8[1] K A0A1L8HGL2_XENLA Nup358 complex, clamps[169 aa] CA 66.7
/62.0
3
/3
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
6lk8[1] Z SEH1A_XENLA Nucleoporin SEH1-A[293 aa] CA 0.0
/62.0
2
/2
A0A1L8HBE3_XENLA Nuclear pore complex protein Nup96
5cww[1] B NUP82_CHATD Nucleoporin NUP82[538 aa] A 33.3
/35.9
27
/29
NU145_CHATD Nucleoporin NUP145N
4ycz[1] C G2Q2S2_THIHA Nup120[195 aa] A 18.2
/33.4
11
/25
G2QES5_THIHA G2QEZ2_THIHA Fusion Protein of Sec13 and Nup145C
7tbi[16] OB Nup82[610 aa] PB 18.8
/30.4
16
/18
Nup116 CTD
3iko[3] C NUP84_YEAST Nucleoporin NUP84[419 aa] B 27.6
/26.4
29
/38
NU145_YEAST Nucleoporin NUP145C
3jro[1] B NUP84_YEAST Nucleoporin NUP84[379 aa] A 28.6
/26.4
28
/35
SEC13_YEAST NU145_YEAST Fusion Protein of Protein Transport Protein SEC13 ..
4xmm[2] F NUP84_YEAST Nucleoporin NUP84[419 aa] B 28.6
/26.4
28
/37
NU145_YEAST Nucleoporin NUP145
7tbj[64] MC NUP107 NTD[419 aa] QC 31.0
/26.4
29
/37
NUP96
7tbi[8] YA Nup84[622 aa] AB 31.0
/26.4
29
/37
Nup145C
7tbi[8] XA Nup84[669 aa] ZA 31.0
/26.4
29
/37
Nup145C
3iko[3] A SEC13_YEAST Protein transport protein SEC13[274 aa] B 28.6
/26.4
14
/39
NU145_YEAST Nucleoporin NUP145C
4xmm[2] A SEC13_YEAST Protein transport protein SEC13[274 aa] B 28.6
/26.4
14
/34
NU145_YEAST Nucleoporin NUP145
7n84[36] G SEC13_YEAST Protein transport protein SEC13[274 aa] F 10.0
/24.9
20
/58
NU145_YEAST Nucleoporin 145c
7tbi[80] CB Sec13[274 aa] AB 28.6
/26.4
14
/47
Nup145C
8tie[2] D SEC13_YEAST Protein transport protein SEC13[286 aa] C 17.6
/24.9
17
/51
A0A8H4C085_YEASX NUP145 isoform 1
7n84[36] I NUP84_YEAST Nucleoporin NUP84[649 aa] F 30.0
/24.9
30
/36
NU145_YEAST Nucleoporin 145c
7n84[9] P NUP84_YEAST Nucleoporin NUP84[648 aa] F 37.5
/24.9
8
/16
NU145_YEAST Nucleoporin 145c
7n84[9] A NU188_YEAST Nucleoporin NUP188[1137 aa] M 9.1
/24.9
11
/11
NU145_YEAST Nucleoporin 145c
7n84[9] E NUP85_YEAST Nucleoporin NUP85[675 aa] M 0.0
/24.9
1
/1
NU145_YEAST Nucleoporin 145c
7n9f[9] XA NUP85_YEAST Nucleoporin NUP85[675 aa] YA 33.3
/24.9
3
/17
NU145_YEAST Nucleoporin 145c
8tie[1] B NUP85_YEAST Nucleoporin NUP85[647 aa] J 0.0
/24.9
1
/1
A0A8H4C085_YEASX NUP145 isoform 1
7n84[9] K NU120_YEAST Nucleoporin NUP120[1006 aa] M 50.0
/24.9
2
/20
NU145_YEAST Nucleoporin 145c
8tie[2] A NU120_YEAST Nucleoporin NUP120[1012 aa] C 50.0
/24.9
2
/25
A0A8H4C085_YEASX NUP145 isoform 1
8tie[2] F NUP84_YEAST Nucleoporin NUP84[726 aa] C 18.2
/24.9
33
/45
A0A8H4C085_YEASX NUP145 isoform 1
8tie[1] M NUP84_YEAST Nucleoporin NUP84[726 aa] C 0.0
/24.9
2
/3
A0A8H4C085_YEASX NUP145 isoform 1
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
1817 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7now[2] E NA
SODIUM ION[1 atoms]
B 75.0
/72.8
4
/4
A0A6I8SCP2_XENTR Nuclear pore complex protein Nup98
7now[2] H NA
SODIUM ION[1 atoms]
D 100.0
/72.8
4
/4
A0A6I8SCP2_XENTR Nuclear pore complex protein Nup98
7nq6[1] C NA
SODIUM ION[1 atoms]
A 80.0
/72.8
5
/5
F6ZMG3_XENTR Nuclear pore complex protein Nup96
7nq6[1] E NA
SODIUM ION[1 atoms]
A 0.0
/72.8
1
/1
F6ZMG3_XENTR Nuclear pore complex protein Nup96
7nqa[1] G NA
SODIUM ION[1 atoms]
C 100.0
/72.8
1
/1
A0A6I8SCP2_XENTR Nuclear pore complex protein Nup98-Nup96
7nq6[1] F CL
CHLORIDE ION[1 atoms]
A 50.0
/72.8
2
/2
F6ZMG3_XENTR Nuclear pore complex protein Nup96
7nq6[1] G CL
CHLORIDE ION[1 atoms]
A 100.0
/72.8
1
/1
F6ZMG3_XENTR Nuclear pore complex protein Nup96
7nq6[1] H CL
CHLORIDE ION[1 atoms]
A 100.0
/72.8
4
/4
F6ZMG3_XENTR Nuclear pore complex protein Nup96
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
1817 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
1ko6[1] C NUP98_HUMAN Nuclear Pore Complex Protein Nup98[148 aa] A 100.0
/100.0
12
/12
NUP98_HUMAN Nuclear Pore Complex Protein Nup98
1ko6[1] A NUP98_HUMAN Nuclear Pore Complex Protein Nup98[152 aa] C 100.0
/100.0
16
/16
NUP98_HUMAN Nuclear Pore Complex Protein Nup98
7peq[8] L NUP98_HUMAN Nuclear pore complex protein Nup96[543 aa] C 100.0
/100.0
1
/1
NUP98_HUMAN Nuclear pore complex protein Nup96
7peq[8] C NUP98_HUMAN Nuclear pore complex protein Nup96[543 aa] L 100.0
/100.0
3
/3
NUP98_HUMAN Nuclear pore complex protein Nup96
7q64[576] G NUP98_HUMAN Nuclear pore complex protein Nup98[34 aa] A 100.0
/100.0
2
/2
NUP98_HUMAN Nuclear pore complex protein Nup98
7q66[21] B NUP98_HUMAN Nuclear pore complex protein Nup98[25 aa] A 100.0
/100.0
6
/6
NUP98_HUMAN Nuclear pore complex protein Nup98
7q66[20] D NUP98_HUMAN Nuclear pore complex protein Nup98[25 aa] B 100.0
/100.0
25
/25
NUP98_HUMAN Nuclear pore complex protein Nup98
7q66[19] B NUP98_HUMAN Nuclear pore complex protein Nup98[25 aa] C 100.0
/100.0
1
/1
NUP98_HUMAN Nuclear pore complex protein Nup98
8ci8[9] A NUP98_HUMAN Nuclear pore complex protein Nup98[10 aa] B 100.0
/100.0
6
/6
NUP98_HUMAN Nuclear pore complex protein Nup98
8ci8[84] C NUP98_HUMAN Nuclear pore complex protein Nup98[26 aa] B 100.0
/100.0
13
/13
NUP98_HUMAN Nuclear pore complex protein Nup98
8ci8[13] E NUP98_HUMAN Nuclear pore complex protein Nup98[10 aa] D 100.0
/100.0
9
/9
NUP98_HUMAN Nuclear pore complex protein Nup98
5hb6[2] B NU145_CHATD Nucleoporin NUP145[143 aa] A 10.5
/35.6
19
/20
NU145_CHATD Nucleoporin NUP145
3bg0[8] C NU145_YEAST Nucleoporin NUP145[420 aa] B 27.8
/26.4
18
/27
NU145_YEAST Nucleoporin NUP145
3bg0[4] F NU145_YEAST Nucleoporin NUP145[423 aa] B 50.0
/26.4
2
/3
NU145_YEAST Nucleoporin NUP145
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
1817 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
5hb6[2] C SO4
SULFATE ION[5 atoms]
A 20.0
/35.6
5
/5
NU145_CHATD Nucleoporin NUP145
5hb6[3] D SO4
SULFATE ION[5 atoms]
A 50.0
/35.6
6
/6
NU145_CHATD Nucleoporin NUP145
5hb6[4] F SO4
SULFATE ION[5 atoms]
A 0.0
/35.6
2
/2
NU145_CHATD Nucleoporin NUP145
5hb6[1] G SO4
SULFATE ION[5 atoms]
B 0.0
/37.0
2
/2
NU145_CHATD Nucleoporin NUP145
7now[2] F SO4
SULFATE ION[5 atoms]
B 66.7
/72.8
3
/3
A0A6I8SCP2_XENTR Nuclear pore complex protein Nup98
7nq6[1] B MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms]
A 66.7
/72.8
3
/3
F6ZMG3_XENTR Nuclear pore complex protein Nup96
3kep[1] C EDO
1,2-ETHANEDIOL[4 atoms]
A 0.0
/39.1
3
/4
NU145_YEAST Nucleoporin NUP145
3kep[2] D EDO
1,2-ETHANEDIOL[4 atoms]
A 50.0
/39.1
4
/4
NU145_YEAST Nucleoporin NUP145
3kep[4] E EDO
1,2-ETHANEDIOL[4 atoms]
A 50.0
/39.1
4
/4
NU145_YEAST Nucleoporin NUP145
3kep[2] F EDO
1,2-ETHANEDIOL[4 atoms]
A 20.0
/39.1
5
/5
NU145_YEAST Nucleoporin NUP145
3kep[13] G EDO
1,2-ETHANEDIOL[4 atoms]
A 60.0
/39.1
5
/5
NU145_YEAST Nucleoporin NUP145
3kep[1] H EDO
1,2-ETHANEDIOL[4 atoms]
A 0.0
/39.1
2
/2
NU145_YEAST Nucleoporin NUP145
3kep[1] I EDO
1,2-ETHANEDIOL[4 atoms]
B 0.0
/39.4
1
/1
NU145_YEAST Nucleoporin NUP145
3kep[3] L EDO
1,2-ETHANEDIOL[4 atoms]
B 28.6
/39.4
7
/7
NU145_YEAST Nucleoporin NUP145
3kep[3] P EDO
1,2-ETHANEDIOL[4 atoms]
B 60.0
/39.4
5
/5
NU145_YEAST Nucleoporin NUP145
3kep[2] R EDO
1,2-ETHANEDIOL[4 atoms]
B 33.3
/39.4
3
/3
NU145_YEAST Nucleoporin NUP145
3kep[1] S EDO
1,2-ETHANEDIOL[4 atoms]
B 33.3
/39.4
3
/3
NU145_YEAST Nucleoporin NUP145
3kes[2] C EDO
1,2-ETHANEDIOL[4 atoms]
A 20.0
/39.7
5
/5
NU145_YEAST Nucleoporin NUP145
3kes[2] O EDO
1,2-ETHANEDIOL[4 atoms]
B 0.0
/39.3
2
/5
NU145_YEAST Nucleoporin NUP145
3kes[1] Q EDO
1,2-ETHANEDIOL[4 atoms]
B 0.0
/39.3
1
/1
NU145_YEAST Nucleoporin NUP145
5hb5[2] C FLC
CITRATE ANION[13 atoms]
A 16.7
/35.9
6
/6
NU145_CHATD Nucleoporin NUP145
5hb5[1] D FLC
CITRATE ANION[13 atoms]
A 0.0
/35.9
3
/3
NU145_CHATD Nucleoporin NUP145
5hb5[2] E FLC
CITRATE ANION[13 atoms]
B 0.0
/35.9
1
/1
NU145_CHATD Nucleoporin NUP145
5hb5[1] F FLC
CITRATE ANION[13 atoms]
B 25.0
/35.9
4
/4
NU145_CHATD Nucleoporin NUP145
5hb5[1] I FLC
CITRATE ANION[13 atoms]
B 100.0
/35.9
2
/4
NU145_CHATD Nucleoporin NUP145
3nf5[1] C GOL
GLYCEROL[6 atoms]
A 40.0
/32.6
5
/5
Q6FU56_CANGA Nucleoporin NUP116
3nf5[1] D GOL
GLYCEROL[6 atoms]
B 0.0
/33.6
3
/3
Q6FU56_CANGA Nucleoporin NUP116
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.