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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
3177255 | 207 | 500 | P51149(RAB7A_HUMAN) | RecName: Full=Ras-related protein Rab-7a ; EC=3.6.5.2 ; |
QUERYSEQ |
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIP YFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKASAESCSC |
207 | region | name | description |
2-207 | CHAIN | /note="Ras-related protein Rab-7a" /id="PRO_0000121121" | |
15-22 | BINDING | /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
34-40 | BINDING | /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
63-67 | BINDING | /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
125-128 | BINDING | /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
156-157 | BINDING | /ligand="GTP" /ligand_id="ChEBI:CHEBI:37565" ECO:0000269|PubMed:20028791" | |
205-205 | LIPID | /note="S-geranylgeranyl cysteine" | |
207-207 | LIPID | /note="S-geranylgeranyl cysteine" | |
1-207 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
207 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
1vg8 | D | 100.0 | RAB7_RAT Ras-related protein Rab-7 | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
207 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1vg0[1] | A | RAE1_RAT Rab proteins geranylgeranyltransferase component A.. | B | 100.0 /100.0 |
24 /24 |
RAB7_RAT Ras-related protein Rab-7 | |
1vg9[4] | A | RAE1_RAT Rab proteins geranylgeranyltransferase component A.. | B | 100.0 /100.0 |
19 /19 |
RAB7_RAT Ras-related protein Rab-7 | |
1yhn[2] | B | RILP_HUMAN Rab interacting lysosomal protein[65 aa] | A | 100.0 /99.5 |
13 /13 |
RAB7_HUMAN Ras-related protein Rab-7 | |
1yhn[2] | B | RILP_HUMAN Rab interacting lysosomal protein[65 aa] | A | 100.0 /99.5 |
17 /17 |
RAB7_HUMAN Ras-related protein Rab-7 | |
6iyb[3] | B | OSBL1_HUMAN Oxysterol-binding protein-related protein 1[135 aa.. | A | 100.0 /99.4 |
12 /12 |
RAB7A_HUMAN Ras-related protein Rab-7a | |
6wcw[1] | B | RUBIC_HUMAN Run domain Beclin-1-interacting and cysteine-rich .. | A | 100.0 /99.4 |
18 /18 |
RAB7A_HUMAN Ras-related protein Rab-7a | |
7f6j[2] | C | PDZD8_HUMAN PDZ domain-containing protein 8[106 aa] | A | 100.0 /99.4 |
26 /26 |
RAB7A_HUMAN Ras-related protein Rab-7a | |
8kb8[2] | A | WDR91_HUMAN WD repeat-containing protein 91[338 aa] | C | 100.0 /99.4 |
17 /17 |
RAB7A_HUMAN Ras-related protein Rab-7a | |
5z2m[1] | A | OSBL1_MOUSE Oxysterol-binding protein-related protein 1[137 aa.. | B | 88.9 /99.4 |
9 /9 |
RAB7A_MOUSE Ras-related protein Rab-7a | |
5z2m[1] | D | OSBL1_MOUSE Oxysterol-binding protein-related protein 1[136 aa.. | C | 100.0 /99.4 |
7 /7 |
RAB7A_MOUSE Ras-related protein Rab-7a | |
5ldd[2] | A | G0SGS3_CHATD Mon1[155 aa] | C | 95.0 /85.1 |
20 /20 |
G0SGE1_CHATD Rab small monomeric GTPase-like protein | |
5ldd[2] | B | G0SD94_CHATD Ccz1[166 aa] | C | 100.0 /85.1 |
6 /6 |
G0SGE1_CHATD Rab small monomeric GTPase-like protein | |
7e1t[1] | C | NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. | A | 40.0 /56.9 |
5 /5 |
RAB9A_HUMAN Ras-related protein Rab-9A | |
7e1t[1] | C | NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. | B | 72.7 /56.5 |
11 /11 |
RAB9A_HUMAN Ras-related protein Rab-9A | |
7e1t[1] | D | NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. | A | 72.7 /56.9 |
11 /11 |
RAB9A_HUMAN Ras-related protein Rab-9A | |
7e1t[1] | D | NDE1_HUMAN Isoform 2 of Nuclear distribution protein nudE hom.. | B | 50.0 /56.5 |
6 /6 |
RAB9A_HUMAN Ras-related protein Rab-9A | |
4qxa[1] | B | SGSM1_MOUSE Small G protein signaling modulator 1[147 aa] | A | 72.7 /54.7 |
11 /11 |
RAB9A_MOUSE Ras-related protein Rab-9A | |
5jcz[3] | B | MYO5A_HUMAN Unconventional myosin-Va[364 aa] | A | 52.9 /42.7 |
17 /17 |
RB11A_HUMAN Ras-related protein Rab-11A | |
4q9u[1] | A | RABX5_HUMAN Rab5 GDP/GTP exchange factor[303 aa] | B | 66.7 /45.3 |
21 /22 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
4kyi[4] | A | Q5ZRP9_LEGPH VipD[530 aa] | B | 69.2 /44.3 |
13 /14 |
RAB5C_HUMAN Ras-related protein Rab-5C | |
2wwx[8] | B | Q29ST3_LEGPN DRRA[200 aa] | A | 64.7 /39.6 |
34 /36 |
RAB1A_HUMAN RAS-RELATED PROTEIN RAB-1 | |
1tu3[6] | F | RABE1_HUMAN Rab GTPase binding effector protein 1[46 aa] | A | 66.7 /43.7 |
9 /9 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1tu3[6] | G | RABE1_HUMAN Rab GTPase binding effector protein 1[51 aa] | A | 66.7 /43.7 |
6 /6 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
3mjh[2] | B | EEA1_HUMAN Early endosome antigen 1[34 aa] | A | 69.2 /43.0 |
13 /13 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
7bl1[1] | B | PK3C3_HUMAN Phosphatidylinositol 3-kinase catalytic subunit ty.. | F | 60.0 /43.0 |
5 /5 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
7bl1[1] | C | PI3R4_HUMAN Phosphoinositide 3-kinase regulatory subunit 4[118.. | F | 100.0 /43.0 |
2 /3 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
2efc[9] | A | Q9LT31_ARATH Similarity to vacuolar protein sorting-associated .. | B | 60.0 /42.7 |
25 /25 |
Q9SN68_ARATH Small GTP-binding protein-like | |
2gzh[9] | B | RFIP2_HUMAN RAB11-FIP2 long isoform[57 aa] | A | 50.0 /42.0 |
12 /12 |
RB11A_HUMAN Ras-related protein Rab-11A | |
4lwz[3] | B | MYO5B_HUMAN Unconventional myosin-Vb[367 aa] | A | 50.0 /41.4 |
14 /14 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2d7c[35] | C | RFIP3_HUMAN Rab11 family-interacting protein 3[42 aa] | A | 42.9 /42.0 |
14 /14 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2hv8[1] | F | RFIP3_HUMAN Rab11 family-interacting protein 3[41 aa] | C | 66.7 /42.0 |
3 /3 |
RB11A_HUMAN Ras-related protein Rab-11A | |
1z0j[1] | B | FYVE-finger-containing Rab5 effector protein raben.. | A | 53.8 /42.4 |
13 /14 |
RB22A_MOUSE Ras-related protein Rab-22A | |
4lwz[1] | D | MYO5B_HUMAN Unconventional myosin-Vb[346 aa] | C | 54.5 /42.3 |
11 /11 |
RB11A_HUMAN Ras-related protein Rab-11A | |
6djl[8] | C | 3BP5_HUMAN SH3 domain-binding protein 5[224 aa] | A | 55.6 /41.6 |
18 /22 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2gzd[4] | C | RFIP2_HUMAN Rab11 family-interacting protein 2[35 aa] | A | 42.9 /42.0 |
14 /14 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2hv8[3] | B | RFIP3_HUMAN Rab11 family-interacting protein 3[54 aa] | A | 43.8 /42.0 |
16 /16 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2hv8[3] | B | RFIP3_HUMAN Rab11 family-interacting protein 3[54 aa] | A | 66.7 /42.0 |
3 /3 |
RB11A_HUMAN Ras-related protein Rab-11A | |
4d0m[6] | F | RFIP3_HUMAN RAB11 FAMILY-INTERACTING PROTEIN 3[32 aa] | B | 50.0 /42.0 |
4 /4 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
4d0m[6] | F | RFIP3_HUMAN RAB11 FAMILY-INTERACTING PROTEIN 3[32 aa] | D | 25.0 /42.0 |
4 /4 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
4uj5[1] | D | RAB3I_HUMAN RAB-3A-INTERACTING PROTEIN[154 aa] | B | 12.5 /42.0 |
8 /9 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
3qbt[4] | E | OCRL_HUMAN Inositol polyphosphate 5-phosphatase OCRL-1[130 aa.. | A | 30.0 /41.9 |
20 /20 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
3sfv[1] | B | A5IFX1_LEGPC LidA protein, substrate of the Dot/Icm system[342 .. | A | 45.7 /40.3 |
35 /40 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
3tnf[1] | B | Q5ZWZ3_LEGPH LidA[379 aa] | A | 46.4 /41.9 |
28 /28 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4lhx[6] | E | RAB3I_HUMAN Rab-3A-interacting protein[76 aa] | A | 50.0 /41.9 |
14 /14 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4lhx[6] | F | RAB3I_HUMAN Rab-3A-interacting protein[76 aa] | A | 50.0 /41.9 |
10 /10 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4li0[2] | E | R3GEF_HUMAN Guanine nucleotide exchange factor for Rab-3A[64 a.. | A | 50.0 /41.9 |
14 /14 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4li0[2] | F | R3GEF_HUMAN Guanine nucleotide exchange factor for Rab-3A[69 a.. | A | 57.1 /41.9 |
7 /7 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
6zsi[4] | C | EHBP1_HUMAN EH domain-binding protein 1[130 aa] | A | 63.6 /41.9 |
11 /13 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
7bwt[1] | A | A0A5K1V7S2_SALTM SPI-1 type III secretion system effector SopD[284 .. | B | 46.7 /41.9 |
15 /19 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4d0l[22] | A | PI4KB_HUMAN PHOSPHATIDYLINOSITOL 4-KINASE BETA[470 aa] | B | 33.3 /42.0 |
9 /10 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
4d0m[12] | S | PI4KB_HUMAN PHOSPHATIDYLINOSITOL 4-KINASE BETA[470 aa] | B | 100.0 /42.0 |
1 /1 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
5fbq[2] | A | PI4KB_HUMAN PI4KB_HUMAN Phosphatidylinositol 4-kinase beta,Phosphatidylino.. | B | 50.0 /41.1 |
14 /14 |
RB11A_HUMAN Ras-related protein Rab-11A | |
4uj3[15] | B | RAB3I_HUMAN RAB-3A-INTERACTING PROTEIN[161 aa] | A | 33.3 /42.0 |
9 /10 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
6rir[12] | C | RIPL2_HUMAN RILP-like protein 2[32 aa] | A | 50.0 /41.5 |
10 /10 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
6yx5[1] | B | DRRA_LEGPN Multifunctional virulence effector protein DrrA[33.. | A | 39.1 /41.2 |
23 /23 |
A0A1U7REJ8_MESAU Ras-related protein Rab-8A | |
4ojk[3] | C | KGP2_RAT cGMP-dependent protein kinase 2[37 aa] | A | 61.5 /42.0 |
13 /16 |
RB11B_HUMAN Ras-related protein Rab-11B | |
4ojk[2] | D | KGP2_RAT cGMP-dependent protein kinase 2[33 aa] | A | 66.7 /42.0 |
3 /4 |
RB11B_HUMAN Ras-related protein Rab-11B | |
6zay[2] | B | A16L1_MOUSE Autophagy-related protein 16-1[86 aa] | A | 62.5 /40.6 |
16 /19 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zay[2] | D | A16L1_MOUSE Autophagy-related protein 16-1[86 aa] | A | 75.0 /40.6 |
4 /4 |
RB33B_HUMAN Ras-related protein Rab-33B | |
5lef[4] | C | KI20A_MOUSE Kinesin-like protein KIF20A[49 aa] | A | 71.4 /39.5 |
7 /8 |
RAB6A_HUMAN Ras-related protein Rab-6A | |
3l0i[2] | A | Q29ST3_LEGPN DrrA[316 aa] | B | 70.0 /39.2 |
30 /35 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
3tkl[1] | B | A5IFX1_LEGPC LidA protein, substrate of the Dot/Icm system[192 .. | A | 38.9 /40.3 |
18 /18 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4d0g[1] | B | RFIP1_HUMAN RAB11 FAMILY-INTERACTING PROTEIN 1[46 aa] | A | 33.3 /40.3 |
12 /12 |
RAB14_HUMAN RAS-RELATED PROTEIN RAB-14 | |
4fmb[6] | A | VIRA_SHIFL Cysteine protease-like virA[351 aa] | B | 53.6 /40.3 |
28 /28 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4fmc[7] | A | O52121_ECOLX ROrf2[351 aa] | B | 59.3 /40.3 |
27 /27 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4hlq[5] | A | TBC20_HUMAN TBC1 domain family member 20[280 aa] | B | 65.2 /40.3 |
23 /23 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
4i1o[4] | D | Q5ZSM7_LEGPH LepB[281 aa] | A | 63.2 /40.3 |
19 /19 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
4iru[3] | A | Q5ZSM7_LEGPH LepB[296 aa] | B | 68.0 /40.3 |
25 /25 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4jvs[1] | A | G9EPL4_9GAMM Putative uncharacterized protein[279 aa] | B | 65.2 /40.3 |
23 /23 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
5szh[4] | A | MICLK_HUMAN MICAL C-terminal-like protein[143 aa] | B | 40.0 /40.3 |
15 /22 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
2zet[2] | B | MELPH_MOUSE Melanophilin[141 aa] | A | 55.6 /40.9 |
27 /38 |
RB27B_MOUSE Ras-related protein Rab-27B | |
6sku[1] | A | ANKX_LEGPH Phosphocholine transferase AnkX[785 aa] | B | 33.3 /40.1 |
27 /29 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
3cue[5] | A | TRS23_YEAST Transport protein particle 23 kDa subunit[159 aa] | F | 70.0 /39.4 |
10 /14 |
YPT1_YEAST GTP-binding protein YPT1 | |
7e8t[3] | G | TRS23_YEAST Trafficking protein particle complex subunit 23[16.. | A | 60.0 /36.3 |
15 /21 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
3bc1[2] | B | SYTL2_HUMAN Synaptotagmin-like protein 2[52 aa] | A | 58.8 /39.6 |
17 /24 |
RB27A_MOUSE Ras-related protein Rab-27A | |
3bbp[8] | D | GCC2_HUMAN GRIP and coiled-coil domain-containing protein 2[3.. | A | 71.4 /39.5 |
7 /7 |
RAB6A_HUMAN Ras-related protein Rab-6A | |
3cwz[1] | B | RA6I1_MOUSE Rab6-interacting protein 1[310 aa] | A | 69.2 /39.5 |
13 /14 |
RAB6A_HUMAN Ras-related protein Rab-6A | |
3cue[4] | C | BET5_YEAST Transport protein particle 18 kDa subunit[143 aa] | F | 100.0 /39.4 |
2 /2 |
YPT1_YEAST GTP-binding protein YPT1 | |
8alk[1] | A | LEM3_LEGPH Phosphocholine hydrolase Lem3[447 aa] | B | 43.8 /39.3 |
16 /16 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
2eqb[4] | B | SEC2_YEAST Rab guanine nucleotide exchange factor SEC2[93 aa].. | A | 60.0 /39.0 |
15 /15 |
SEC4_YEAST Ras-related protein SEC4 | |
1ukv[2] | A | GDI1_YEAST Secretory pathway GDP dissociation inhibitor[442 a.. | B | 61.9 /38.8 |
21 /32 |
YPT1_YEAST GTP-binding protein YPT1 | |
3cph[1] | A | GDI1_YEAST Rab GDP-dissociation inhibitor[441 aa] | B | 75.0 /39.0 |
16 /16 |
SEC4_YEAST Ras-related protein SEC4 | |
6ekk[2] | A | DEN1A_HUMAN DENN domain-containing protein 1A[375 aa] | C | 53.6 /38.7 |
28 /28 |
RAB35_HUMAN Ras-related protein Rab-35 | |
1z0k[2] | B | Q59EY8_HUMAN FYVE-finger-containing Rab5 effector protein raben.. | A | 38.9 /38.4 |
18 /19 |
RAB4A_HUMAN GTP-binding protein | |
3tw8[2] | A | DEN1B_HUMAN DENN domain-containing protein 1B[343 aa] | B | 53.3 /38.1 |
30 /30 |
RAB35_HUMAN Ras-related protein Rab-35 | |
8ij9[1] | C | RB6I2_RAT ELKS/Rab6-interacting/CAST family member 1[71 aa] | A | 55.6 /38.2 |
18 /20 |
RAB6B_MOUSE Ras-related protein Rab-6B | |
8ij9[1] | D | RB6I2_RAT ELKS/Rab6-interacting/CAST family member 1[70 aa] | B | 57.1 /38.2 |
21 /23 |
RAB6B_MOUSE Ras-related protein Rab-6B | |
5lpn[2] | B | MICA1_HUMAN Protein-methionine sulfoxide oxidase MICAL1[132 aa.. | A | 57.1 /38.0 |
21 /26 |
RAB10_HUMAN Ras-related protein Rab-10 | |
6if2[1] | B | RUSC2_HUMAN Iporin[195 aa] | A | 50.0 /38.0 |
12 /14 |
RAB35_HUMAN Ras-related protein Rab-35 | |
6if3[1] | A | ACAP2_HUMAN Arf-GAP with coiled-coil, ANK repeat and PH domain.. | B | 56.2 /38.0 |
16 /19 |
RAB35_HUMAN Ras-related protein Rab-35 | |
8fo2[1] | B | LRRK2_HUMAN Leucine-rich repeat serine/threonine-protein kinas.. | A | 55.6 /38.0 |
9 /9 |
RAB7L_HUMAN Ras-related protein Rab-7L1 | |
8fo8[1] | C | LRRK2_HUMAN Leucine-rich repeat serine/threonine-protein kinas.. | A | 45.5 /38.0 |
11 /11 |
RAB7L_HUMAN Ras-related protein Rab-7L1 | |
8fo8[1] | D | LRRK2_HUMAN Leucine-rich repeat serine/threonine-protein kinas.. | B | 33.3 /38.0 |
6 /6 |
RAB7L_HUMAN Ras-related protein Rab-7L1 | |
5oed[1] | A | Q6EAT3_SALCE GtgE[195 aa] | B | 53.8 /37.8 |
26 /26 |
RAB32_HUMAN Ras-related protein Rab-32 | |
4cym[10] | D | ANR27_HUMAN ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27[167 aa.. | A | 38.5 /37.3 |
13 /13 |
RAB32_HUMAN RAS-RELATED PROTEIN RAB-32 | |
4cym[10] | D | ANR27_HUMAN ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27[167 aa.. | A | 42.9 /37.3 |
14 /14 |
RAB32_HUMAN RAS-RELATED PROTEIN RAB-32 | |
3cue[5] | D | BET3_YEAST Transport protein particle 22 kDa subunit[186 aa] | F | 33.3 /39.4 |
3 /3 |
YPT1_YEAST GTP-binding protein YPT1 | |
3cue[4] | E | BET3_YEAST Transport protein particle 22 kDa subunit[188 aa] | F | 71.4 /39.4 |
7 /7 |
YPT1_YEAST GTP-binding protein YPT1 | |
7e8t[3] | K | BET3_YEAST Trafficking protein particle complex subunit BET3[.. | A | 50.0 /36.3 |
2 /2 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
7e8t[6] | L | BET3_YEAST Trafficking protein particle complex subunit BET3[.. | A | 66.7 /36.3 |
6 /6 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
7ea3[2] | F | BET3_YEAST Trafficking protein particle complex subunit BET3[.. | L | 0.0 /36.3 |
1 /1 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
7kmt[1] | E | BET3_YEAST Trafficking protein particle complex subunit BET3[.. | H | 0.0 /40.0 |
2 /2 |
YPT1_YEAST GTP-binding protein YPT1 | |
7e8t[3] | C | TR120_YEAST Trafficking protein particle complex II-specific s.. | A | 31.2 /36.3 |
16 /20 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
7e8t[6] | J | BET5_YEAST Trafficking protein particle complex subunit BET5[.. | A | 60.0 /36.3 |
5 /5 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
7kmt[1] | C | BET5_YEAST Trafficking protein particle complex subunit BET5[.. | H | 75.0 /40.0 |
4 /4 |
YPT1_YEAST GTP-binding protein YPT1 | |
7u05[3] | G | TRS23_YEAST Trafficking protein particle complex subunit 23[17.. | K | 66.7 /36.3 |
15 /20 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
7u05[3] | N | TR120_YEAST Trafficking protein particle complex II-specific s.. | K | 16.7 /36.3 |
18 /20 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
8a4a[1] | A | REP15_HUMAN Rab15 effector protein[207 aa] | B | 40.0 /37.3 |
15 /16 |
RAB3C_BOVIN Ras-related protein Rab-3C | |
8a4b[2] | A | REP15_HUMAN Rab15 effector protein[208 aa] | B | 40.0 /35.4 |
15 /15 |
RAB3B_HUMAN Ras-related protein Rab-3B | |
8a4c[2] | A | REP15_HUMAN Rab15 effector protein[205 aa] | B | 43.8 /36.1 |
16 /16 |
RAB3B_HUMAN Ras-related protein Rab-3B | |
1zbd[2] | B | RP3A_RAT RABPHILIN-3A[124 aa] | A | 50.0 /34.0 |
22 /32 |
RAB3A_RAT RABPHILIN-3A | |
1zbd[2] | B | RP3A_RAT RABPHILIN-3A[124 aa] | A | 11.1 /34.0 |
9 /11 |
RAB3A_RAT RABPHILIN-3A | |
1k5d[8] | B | RANG_HUMAN Ran-specific GTPase-activating protein[146 aa] | A | 21.7 /34.0 |
23 /47 |
RAN_HUMAN GTP-binding nuclear protein RAN | |
1k5d[8] | C | RNA1_SCHPO Ran GTPase activating protein 1[344 aa] | A | 50.0 /34.0 |
20 /20 |
RAN_HUMAN GTP-binding nuclear protein RAN | |
1qbk[2] | A | TNPO1_HUMAN KARYOPHERIN BETA2[880 aa] | B | 36.8 /34.0 |
38 /41 |
RAN_HUMAN RAN | |
1rrp[4] | B | RBP2_HUMAN NUCLEAR PORE COMPLEX PROTEIN NUP358[134 aa] | A | 10.5 /34.0 |
19 /43 |
RAN_HUMAN RAN | |
1rrp[4] | D | RBP2_HUMAN NUCLEAR PORE COMPLEX PROTEIN NUP358[134 aa] | A | 100.0 /34.0 |
1 /1 |
RAN_HUMAN RAN | |
5cll[6] | B | RBP2_HUMAN E3 SUMO-protein ligase RanBP2[139 aa] | A | 27.3 /34.0 |
22 /34 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
1wa5[1] | B | A0A6A5Q590_YEASX SRP1 isoform 1[466 aa] | A | 20.0 /34.0 |
5 /5 |
RAN_CANLF GTP-binding nuclear protein Ran | |
1wa5[1] | C | CSE1_YEAST Importin alpha re-exporter[950 aa] | A | 43.8 /34.0 |
32 /32 |
RAN_CANLF GTP-binding nuclear protein Ran | |
3a6p[4] | A | XPO5_HUMAN Exportin-5[1072 aa] | C | 18.5 /34.0 |
27 /29 |
RAN_CANFA GTP-binding nuclear protein Ran | |
3ea5[1] | B | IMB1_YEAST Importin subunit beta-1[859 aa] | A | 26.8 /34.0 |
41 /43 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
3gj3[1] | B | NU153_RAT Nuclear pore complex protein Nup153[27 aa] | A | 28.6 /34.0 |
14 /14 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
3w3z[1] | A | IMB3_YEAST Importin subunit beta-3[1013 aa] | B | 37.5 /34.0 |
24 /24 |
RAN_CANFA GTP-binding nuclear protein Ran | |
4gmx[32] | B | YRB1_YEAST Ran-specific GTPase-activating protein 1[123 aa] | A | 11.1 /34.0 |
9 /35 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
4gmx[26] | C | XPO1_YEAST Exportin-1[1015 aa] | A | 33.3 /34.0 |
27 /31 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
6a38[6] | C | XPO1_YEAST Exportin-1[996 aa] | A | 29.2 /34.0 |
24 /28 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
4ol0[1] | B | TNPO3_HUMAN Transportin-3[902 aa] | A | 34.4 /34.0 |
32 /32 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
7mnx[6] | B | RBP2_HUMAN E3 SUMO-protein ligase RanBP2[130 aa] | A | 16.7 /34.0 |
18 /48 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
7mny[1] | H | RBP2_HUMAN E3 SUMO-protein ligase RanBP2[134 aa] | G | 11.1 /34.0 |
18 /41 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
7mnz[6] | B | RBP2_HUMAN E3 SUMO-protein ligase RanBP2[138 aa] | A | 11.8 /34.0 |
17 /43 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
7mo0[1] | B | NUP50_HUMAN Nuclear pore complex protein Nup50[126 aa] | A | 23.1 /34.0 |
13 /40 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
NUCLEOTIDE | |||||||
207 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
3a6p[2] | D | pre-microRNA | C | 100.0 /34.0 |
1 /1 |
RAN_CANFA GTP-binding nuclear protein Ran | |
3a6p[2] | E | pre-microRNA | C | 0.0 /34.0 |
1 /1 |
RAN_CANFA GTP-binding nuclear protein Ran | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
207 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1ek0[1] | E |
GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] |
A | 0.0 /40.6 |
3 /5 |
YPT51_YEAST PROTEIN (GTP-BINDING PROTEIN YPT51) | |
1g16[172] | G |
GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] |
A | 73.7 /38.8 |
19 /19 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1tu4[4] | K |
GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] |
A | 60.0 /43.7 |
5 /5 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
2iey[2] | C |
GDP
GUANOSINE-5'-DIPHOSPHATE[28 atoms] |
B | 100.0 /41.9 |
1 /1 |
RB27B_MOUSE Ras-related protein Rab-27B | |
1n6l[88] | C |
GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] |
A | 72.7 /43.7 |
22 /22 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
5xr7[8] | C |
GTP
GUANOSINE-5'-TRIPHOSPHATE[32 atoms] |
A | 76.2 /40.9 |
21 /21 |
RAA1A_ARATH Ras-related protein RABA1a | |
4phh[4] | E |
2UK
5'-O-[(R)-hydroxy{[(S)-hydroxy(phosphonoamino)phos.. |
A | 90.0 /69.5 |
20 /20 |
YPT7_YEAST GTP-binding protein YPT7 | |
4phg[1] | C |
2UJ
N-[3-(propanoylamino)propyl]guanosine 5'-(tetrahyd.. |
A | 91.3 /68.4 |
23 /23 |
YPT7_YEAST GTP-binding protein YPT7 | |
4phf[1] | B |
2UH
N-[3-(propanoylamino)propyl]guanosine 5'-(trihydro.. |
A | 87.5 /67.3 |
16 /16 |
YPT7_YEAST GTP-binding protein YPT7 | |
1s8f[14] | E |
BEZ
BENZOIC ACID[9 atoms] |
A | 50.0 /58.2 |
2 /2 |
RAB9A_CANFA Ras-related protein Rab-9A | |
1s8f[2] | G |
BEZ
BENZOIC ACID[9 atoms] |
B | 100.0 /57.1 |
1 /1 |
RAB9A_CANFA Ras-related protein Rab-9A | |
2hei[2] | D |
D1D
(4S,5S)-1,2-DITHIANE-4,5-DIOL[8 atoms] |
A | 63.6 /44.5 |
11 /11 |
RAB5B_HUMAN Ras-related protein Rab-5B | |
2efe[2] | E |
GNH
AMINOPHOSPHONIC ACID-GUANYLATE ESTER[28 atoms] |
B | 80.0 /42.7 |
15 /16 |
Q9SN68_ARATH Small GTP-binding protein-like | |
6yx5[1] | E |
GLC
alpha-D-glucopyranose[12 atoms] |
A | 66.7 /41.2 |
6 /7 |
A0A1U7REJ8_MESAU Ras-related protein Rab-8A | |
6yx5[1] | F |
LJN
[(2~{R},3~{S},4~{R},5~{R})-5-[4-(acetamidomethyl)-.. |
A | 0.0 /41.2 |
1 /1 |
A0A1U7REJ8_MESAU Ras-related protein Rab-8A | |
7opq[2] | C |
06D
1-[(2~{S})-2-(4-methoxyphenyl)pyrrolidin-1-yl]prop.. |
A | 50.0 /40.9 |
4 /8 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
7opr[2] | L |
05Y
~{N}-[1-(2-pyridin-2-ylethyl)benzimidazol-2-yl]pro.. |
A | 42.9 /40.9 |
7 /10 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
1oiw[1] | B |
GSP
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE[32 atom.. |
A | 69.6 /42.0 |
23 /23 |
R11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
2ffq[1] | C |
GSP
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE[32 atom.. |
A | 80.0 /38.3 |
25 /25 |
RAB6B_HUMAN Ras-related protein Rab-6B | |
4d0l[20] | H |
GSP
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE[32 atom.. |
B | 69.6 /42.0 |
23 /23 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
7ezd[2] | D |
GSP
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE[32 atom.. |
B | 73.7 /40.3 |
19 /19 |
A0A135VL07_9ARCH Chains: A,B | |
1ek0[179] | D |
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. |
A | 68.2 /40.6 |
22 /22 |
YPT51_YEAST PROTEIN (GTP-BINDING PROTEIN YPT51) | |
3rwm[1] | D |
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. |
A | 0.0 /35.0 |
1 /3 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
7opp[6] | C |
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. |
A | 75.0 /41.1 |
24 /24 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
8a4a[1] | C |
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER[32 ato.. |
B | 70.8 /37.3 |
24 /24 |
RAB3C_BOVIN Ras-related protein Rab-3C | |
3nkv[2] | F |
AMP
ADENOSINE MONOPHOSPHATE[22 atoms] |
A | 60.0 /40.3 |
5 /5 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
8alk[1] | H |
OJU
2-[[[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3.. |
B | 0.0 /39.3 |
1 /1 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
7eq2[2] | E |
NCO
COBALT HEXAMMINE(III)[7 atoms] |
A | 50.0 /39.3 |
6 /6 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
7eq2[2] | F |
NCO
COBALT HEXAMMINE(III)[7 atoms] |
A | 0.0 /39.3 |
3 /3 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
6y7g[1] | G |
BTB
2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PR.. |
B | 50.0 /38.4 |
4 /5 |
RAB3C_HUMAN Ras-related protein Rab-3C | |
4cym[10] | G |
GCP
PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER[32 at.. |
A | 82.6 /37.3 |
23 /23 |
RAB32_HUMAN RAS-RELATED PROTEIN RAB-32 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
207 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1ek0[422] | B |
MG
MAGNESIUM ION[1 atoms] |
A | 50.0 /40.6 |
2 /2 |
YPT51_YEAST PROTEIN (GTP-BINDING PROTEIN YPT51) | |
1z08[1] | M |
MG
MAGNESIUM ION[1 atoms] |
D | 0.0 /36.4 |
1 /2 |
RAB21_HUMAN Ras-related protein Rab-21 | |
2rhd[2] | C |
MG
MAGNESIUM ION[1 atoms] |
A | 0.0 /40.9 |
1 /1 |
Q7YYW6_CRYPV Small GTP binding protein rab1a | |
4fmd[1] | Q |
MG
MAGNESIUM ION[1 atoms] |
F | 66.7 /42.3 |
3 /3 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4phg[1] | D |
YT3
YTTRIUM (III) ION[1 atoms] |
A | 0.0 /68.4 |
1 /1 |
YPT7_YEAST GTP-binding protein YPT7 | |
4phg[1] | E |
YT3
YTTRIUM (III) ION[1 atoms] |
A | 100.0 /68.4 |
2 /2 |
YPT7_YEAST GTP-binding protein YPT7 | |
4phg[1] | F |
YT3
YTTRIUM (III) ION[1 atoms] |
A | 100.0 /68.4 |
1 /1 |
YPT7_YEAST GTP-binding protein YPT7 | |
1s8f[2] | C |
SR
STRONTIUM ION[1 atoms] |
A | 0.0 /58.2 |
1 /1 |
RAB9A_CANFA Ras-related protein Rab-9A | |
1s8f[4] | I |
SR
STRONTIUM ION[1 atoms] |
B | 66.7 /57.1 |
3 /3 |
RAB9A_CANFA Ras-related protein Rab-9A | |
1g16[4] | E |
CO
COBALT (II) ION[1 atoms] |
A | 0.0 /38.8 |
1 /1 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[3] | F |
CO
COBALT (II) ION[1 atoms] |
A | 0.0 /38.8 |
2 /2 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[1] | O |
CO
COBALT (II) ION[1 atoms] |
D | 0.0 /38.8 |
1 /1 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1tu4[8] | E |
CO
COBALT (II) ION[1 atoms] |
A | 0.0 /43.7 |
1 /1 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1tu4[8] | H |
CO
COBALT (II) ION[1 atoms] |
A | 0.0 /43.7 |
2 /2 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1ek0[1] | C |
NI
NICKEL (II) ION[1 atoms] |
A | 0.0 /40.6 |
2 /2 |
YPT51_YEAST PROTEIN (GTP-BINDING PROTEIN YPT51) | |
2f9m[1] | C |
NI
NICKEL (II) ION[1 atoms] |
A | 33.3 /42.0 |
3 /3 |
RB11B_HUMAN RAB11B, member RAS oncogene family | |
1vg9[4] | J |
K
POTASSIUM ION[1 atoms] |
B | 100.0 /100.0 |
1 /1 |
RAB7_RAT Ras-related protein Rab-7 | |
4iru[1] | Y |
K
POTASSIUM ION[1 atoms] |
B | 50.0 /40.3 |
2 /2 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
3nkv[1] | E |
BA
BARIUM ION[1 atoms] |
A | 66.7 /40.3 |
3 /3 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
3nkv[1] | I |
BA
BARIUM ION[1 atoms] |
B | 0.0 /39.9 |
2 /2 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
2iez[4] | E |
CA
CALCIUM ION[1 atoms] |
A | 100.0 /40.5 |
1 /1 |
RB27B_MOUSE Ras-related protein Rab-27B | |
2il1[4] | C |
CA
CALCIUM ION[1 atoms] |
A | 0.0 /39.1 |
2 /2 |
RAB43_HUMAN Rab12 | |
4g01[1] | C |
CA
CALCIUM ION[1 atoms] |
B | 0.0 /42.7 |
1 /1 |
RAF2B_ARATH Ras-related protein RABF2b | |
8alk[1] | G |
CA
CALCIUM ION[1 atoms] |
B | 66.7 /39.3 |
3 /3 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
6s5h[1] | M |
BR
BROMIDE ION[1 atoms] |
A | 100.0 /38.9 |
1 /1 |
RAB38_HUMAN Ras-related protein Rab-38 | |
6s5h[1] | N |
BR
BROMIDE ION[1 atoms] |
A | 0.0 /38.9 |
1 /1 |
RAB38_HUMAN Ras-related protein Rab-38 | |
6s5h[1] | O |
BR
BROMIDE ION[1 atoms] |
A | 0.0 /38.9 |
1 /1 |
RAB38_HUMAN Ras-related protein Rab-38 | |
2gf9[9] | D |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 50.0 /35.4 |
2 /2 |
RAB3D_HUMAN Ras-related protein Rab-3D | |
2il1[2] | E |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 33.3 /39.1 |
3 /3 |
RAB43_HUMAN Rab12 | |
2il1[3] | F |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 0.0 /39.1 |
1 /1 |
RAB43_HUMAN Rab12 | |
2il1[7] | G |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 50.0 /39.1 |
2 /2 |
RAB43_HUMAN Rab12 | |
2il1[2] | I |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 0.0 /39.1 |
2 /2 |
RAB43_HUMAN Rab12 | |
2ocb[1] | E |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 25.0 /57.1 |
4 /4 |
RAB9B_HUMAN Ras-related protein Rab-9B | |
2ocb[1] | F |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 33.3 /57.1 |
3 /3 |
RAB9B_HUMAN Ras-related protein Rab-9B | |
2ocb[1] | I |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 100.0 /57.1 |
2 /2 |
RAB9B_HUMAN Ras-related protein Rab-9B | |
2oil[1] | D |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 50.0 /39.6 |
2 /2 |
RAB25_HUMAN Ras-related protein Rab-25 | |
3dz8[2] | C |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 100.0 /36.1 |
4 /4 |
RAB3B_HUMAN Ras-related protein Rab-3B | |
3dz8[2] | D |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 0.0 /36.1 |
3 /3 |
RAB3B_HUMAN Ras-related protein Rab-3B | |
3dz8[2] | E |
UNX
UNKNOWN ATOM OR ION[1 atoms] |
A | 0.0 /36.1 |
1 /1 |
RAB3B_HUMAN Ras-related protein Rab-3B | |
4z8y[2] | E |
ZN
ZINC ION[1 atoms] |
A | 0.0 /38.6 |
2 /2 |
SEC4_YEAST Ras-related protein SEC4 | |
5ub8[2] | C |
ZN
ZINC ION[1 atoms] |
A | 50.0 /35.5 |
2 /2 |
Q59KX4_CANAL Likely rab family GTP-binding protein | |
5ub8[2] | D |
ZN
ZINC ION[1 atoms] |
A | 50.0 /35.5 |
2 /2 |
Q59KX4_CANAL Likely rab family GTP-binding protein | |
1oix[1] | E |
CL
CHLORIDE ION[1 atoms] |
A | 25.0 /42.0 |
4 /4 |
R11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
1s8f[2] | J |
CL
CHLORIDE ION[1 atoms] |
B | 0.0 /57.1 |
4 /4 |
RAB9A_CANFA Ras-related protein Rab-9A | |
4hav[3] | F |
CL
CHLORIDE ION[1 atoms] |
A | 0.0 /34.2 |
2 /2 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
4hb2[2] | H |
CL
CHLORIDE ION[1 atoms] |
A | 25.0 /34.2 |
4 /4 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
4phh[2] | J |
CL
CHLORIDE ION[1 atoms] |
B | 80.0 /69.3 |
5 /5 |
YPT7_YEAST GTP-binding protein YPT7 | |
5ytb[1] | H |
CL
CHLORIDE ION[1 atoms] |
A | 0.0 /34.0 |
1 /1 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
207 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1s8f[8] | A | RAB9A_CANFA Ras-related protein Rab-9A[168 aa] | A | 50.0 /58.2 |
2 /2 |
RAB9A_CANFA Ras-related protein Rab-9A | |
1s8f[4] | B | RAB9A_CANFA Ras-related protein Rab-9A[173 aa] | A | 66.7 /58.2 |
18 /18 |
RAB9A_CANFA Ras-related protein Rab-9A | |
1tu4[16] | B | RAB5A_HUMAN Ras-related protein Rab-5A[162 aa] | A | 60.0 /43.7 |
15 /15 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1tu4[16] | B | RAB5A_HUMAN Ras-related protein Rab-5A[162 aa] | A | 75.0 /43.7 |
8 /10 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1tu4[4] | A | RAB5A_HUMAN Ras-related protein Rab-5A[169 aa] | B | 40.0 /44.5 |
10 /10 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
2hei[1] | B | RAB5B_HUMAN Ras-related protein Rab-5B[165 aa] | A | 60.0 /44.5 |
15 /15 |
RAB5B_HUMAN Ras-related protein Rab-5B | |
2hei[1] | A | RAB5B_HUMAN Ras-related protein Rab-5B[163 aa] | B | 50.0 /44.2 |
14 /17 |
RAB5B_HUMAN Ras-related protein Rab-5B | |
1oiv[4] | B | R11A_HUMAN RAS-RELATED PROTEIN RAB-11A[168 aa] | A | 44.4 /42.7 |
18 /20 |
R11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
5ez5[2] | B | RB11A_HUMAN Ras-related protein Rab-11A[168 aa] | A | 40.0 /42.0 |
5 /5 |
RB11A_HUMAN Ras-related protein Rab-11A | |
1z0a[4] | B | RAB2A_HUMAN Ras-related protein Rab-2A[163 aa] | A | 75.0 /40.8 |
8 /14 |
RAB2A_HUMAN Ras-related protein Rab-2A | |
1z0a[6] | C | RAB2A_HUMAN Ras-related protein Rab-2A[169 aa] | A | 33.3 /40.8 |
6 /6 |
RAB2A_HUMAN Ras-related protein Rab-2A | |
2iez[1] | D | RB27B_MOUSE Ras-related protein Rab-27B[173 aa] | C | 46.5 /41.3 |
43 /46 |
RB27B_MOUSE Ras-related protein Rab-27B | |
7opp[6] | B | SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | A | 47.1 /41.1 |
17 /31 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
2y8e[2] | B | O18334_DROME RAB-PROTEIN 6[167 aa] | A | 38.5 /40.8 |
13 /13 |
O18334_DROME RAB-PROTEIN 6 | |
2f7s[9] | B | RB27B_HUMAN Ras-related protein Rab-27B[176 aa] | A | 53.1 /42.0 |
49 /59 |
RB27B_HUMAN Ras-related protein Rab-27B | |
2iey[2] | A | RB27B_MOUSE Ras-related protein Rab-27B[164 aa] | B | 50.0 /41.9 |
4 /4 |
RB27B_MOUSE Ras-related protein Rab-27B | |
6o62[2] | A | SEC4_CANAL Ras-related protein SEC4[169 aa] | A | 44.0 /40.4 |
25 /30 |
SEC4_CANAL Ras-related protein SEC4 | |
6huf[16] | D | RB27A_HUMAN Ras-related protein Rab-27A[171 aa] | A | 50.0 /40.3 |
6 /6 |
RB27A_HUMAN Ras-related protein Rab-27A | |
6huf[16] | I | RB27A_HUMAN Ras-related protein Rab-27A[171 aa] | A | 75.0 /40.3 |
4 /4 |
RB27A_HUMAN Ras-related protein Rab-27A | |
7ezb[1] | B | A0A135VL07_9ARCH Thorarchaeota Rab[171 aa] | A | 22.2 /40.1 |
18 /22 |
A0A135VL07_9ARCH Thorarchaeota Rab | |
2il1[2] | A | RAB43_HUMAN Rab12[163 aa] | A | 18.2 /39.1 |
11 /11 |
RAB43_HUMAN Rab12 | |
1yu9[2] | A | RAB4A_HUMAN GTP-binding protein[175 aa] | A | 66.7 /39.0 |
9 /12 |
RAB4A_HUMAN GTP-binding protein | |
1g16[1] | B | SEC4_YEAST RAS-RELATED PROTEIN SEC4[161 aa] | A | 0.0 /38.8 |
1 /1 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[1] | A | SEC4_YEAST RAS-RELATED PROTEIN SEC4[159 aa] | B | 0.0 /38.8 |
1 /1 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[1] | C | SEC4_YEAST RAS-RELATED PROTEIN SEC4[167 aa] | B | 66.7 /38.8 |
3 /3 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[1] | D | SEC4_YEAST RAS-RELATED PROTEIN SEC4[160 aa] | B | 0.0 /38.8 |
2 /2 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[1] | B | SEC4_YEAST RAS-RELATED PROTEIN SEC4[161 aa] | C | 66.7 /39.0 |
3 /4 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[1] | D | SEC4_YEAST RAS-RELATED PROTEIN SEC4[160 aa] | C | 81.8 /39.0 |
11 /11 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[2] | B | SEC4_YEAST RAS-RELATED PROTEIN SEC4[161 aa] | D | 0.0 /38.8 |
2 /2 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g16[1] | C | SEC4_YEAST RAS-RELATED PROTEIN SEC4[167 aa] | D | 40.0 /38.8 |
10 /13 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1g17[1] | A | SEC4_YEAST RAS-RELATED PROTEIN SEC4[168 aa] | B | 0.0 /39.0 |
1 /1 |
SEC4_YEAST RAS-RELATED PROTEIN SEC4 | |
1z08[2] | D | RAB21_HUMAN Ras-related protein Rab-21[166 aa] | C | 9.1 /36.4 |
11 /12 |
RAB21_HUMAN Ras-related protein Rab-21 | |
3dz8[2] | A | RAB3B_HUMAN Ras-related protein Rab-3B[178 aa] | A | 16.7 /36.1 |
18 /27 |
RAB3B_HUMAN Ras-related protein Rab-3B | |
5ub8[2] | A | Q59KX4_CANAL Likely rab family GTP-binding protein[174 aa] | A | 42.9 /35.5 |
7 /17 |
Q59KX4_CANAL Likely rab family GTP-binding protein | |
3rwo[2] | B | YPT32_YEAST GTP-binding protein YPT32/YPT11[170 aa] | A | 58.3 /35.0 |
12 /12 |
YPT32_YEAST GTP-binding protein YPT32/YPT11 | |
1zbd[2] | A | RAB3A_RAT RABPHILIN-3A[177 aa] | A | 50.0 /34.0 |
2 /2 |
RAB3A_RAT RABPHILIN-3A | |
1rrp[4] | C | RAN_HUMAN RAN[180 aa] | A | 0.0 /34.0 |
2 /2 |
RAN_HUMAN RAN | |
1rrp[4] | C | RAN_HUMAN RAN[180 aa] | A | 40.0 /34.0 |
5 /6 |
RAN_HUMAN RAN | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
207 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
1vg9[4] | L |
P33
3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL[22 atoms] |
B | 100.0 /100.0 |
5 /5 |
RAB7_RAT Ras-related protein Rab-7 | |
2e9s[2] | D |
NO3
NITRATE ION[4 atoms] |
A | 71.4 /38.3 |
7 /7 |
RAB6B_HUMAN Ras-related protein Rab-6B | |
4phf[1] | D |
NO3
NITRATE ION[4 atoms] |
A | 66.7 /67.3 |
6 /6 |
YPT7_YEAST GTP-binding protein YPT7 | |
4hlq[13] | N |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
B | 88.9 /40.3 |
9 /9 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
5jcz[3] | I |
BEF
BERYLLIUM TRIFLUORIDE ION[4 atoms] |
A | 85.7 /42.7 |
7 /7 |
RB11A_HUMAN Ras-related protein Rab-11A | |
1vg0[1] | G |
PG4
TETRAETHYLENE GLYCOL[13 atoms] |
B | 100.0 /100.0 |
4 /4 |
RAB7_RAT Ras-related protein Rab-7 | |
4uj3[1] | PA |
PG4
TETRAETHYLENE GLYCOL[13 atoms] |
V | 100.0 /42.2 |
1 /1 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
1z0j[1] | E |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 16.7 /42.4 |
6 /6 |
RB22A_MOUSE Ras-related protein Rab-22A | |
2bcg[1] | G |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
B | 0.0 /38.8 |
1 /1 |
YPT1_YEAST GTP-binding protein YPT1 | |
2bme[3] | F |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 40.0 /39.6 |
5 /5 |
RAB4A_HUMAN RAS-RELATED PROTEIN RAB4A | |
2bme[1] | G |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 50.0 /39.6 |
4 /4 |
RAB4A_HUMAN RAS-RELATED PROTEIN RAB4A | |
6stg[1] | G |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
B | 0.0 /42.0 |
3 /3 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
2d7c[1] | G |
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms] |
A | 20.0 /42.0 |
5 /5 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2hv8[1] | O |
MES
2-(N-MORPHOLINO)-ETHANESULFONIC ACID[12 atoms] |
C | 60.0 /42.0 |
5 /5 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2hv8[1] | J |
2ME
METHOXYETHANE[4 atoms] |
C | 50.0 /42.0 |
2 /2 |
RB11A_HUMAN Ras-related protein Rab-11A | |
4i1o[3] | L |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 50.0 /40.3 |
4 /4 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
4i1o[1] | Q |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
C | 60.0 /40.3 |
5 /5 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
4i1o[2] | R |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
C | 57.1 /40.3 |
7 /7 |
RAB1B_HUMAN Ras-related protein Rab-1B | |
5szj[1] | E |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 0.0 /38.0 |
1 /1 |
RAB10_HUMAN Ras-related protein Rab-10 | |
6zay[1] | G |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 66.7 /40.6 |
6 /6 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zay[1] | H |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 0.0 /40.6 |
3 /3 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zay[1] | Q |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
C | 25.0 /40.6 |
4 /4 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zay[1] | S |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
C | 25.0 /40.6 |
4 /4 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zay[1] | U |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
C | 100.0 /40.6 |
3 /3 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zsi[2] | F |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 33.3 /41.9 |
6 /6 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
7bwt[1] | C |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
B | 100.0 /41.9 |
2 /2 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
1tu4[17] | R |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /43.7 |
1 /1 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1tu4[4] | R |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /44.5 |
1 /1 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1yu9[5] | C |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /39.0 |
3 /3 |
RAB4A_HUMAN GTP-binding protein | |
2hv8[2] | M |
SO4
SULFATE ION[5 atoms] |
C | 100.0 /42.0 |
1 /1 |
RB11A_HUMAN Ras-related protein Rab-11A | |
2y8e[1] | C |
SO4
SULFATE ION[5 atoms] |
A | 50.0 /40.8 |
2 /3 |
O18334_DROME RAB-PROTEIN 6 | |
2y8e[1] | F |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /40.8 |
1 /2 |
O18334_DROME RAB-PROTEIN 6 | |
2y8e[1] | G |
SO4
SULFATE ION[5 atoms] |
B | 33.3 /40.8 |
3 /3 |
O18334_DROME RAB-PROTEIN 6 | |
2zet[2] | I |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /40.9 |
1 /1 |
RB27B_MOUSE Ras-related protein Rab-27B | |
3l0i[3] | F |
SO4
SULFATE ION[5 atoms] |
B | 83.3 /39.2 |
6 /6 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
3qbt[4] | Q |
SO4
SULFATE ION[5 atoms] |
A | 75.0 /41.9 |
4 /4 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4lhx[4] | G |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /41.9 |
7 /7 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4lhx[3] | I |
SO4
SULFATE ION[5 atoms] |
B | 50.0 /41.9 |
2 /2 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
4uj3[1] | IA |
SO4
SULFATE ION[5 atoms] |
M | 0.0 /42.6 |
3 /3 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
4uj5[1] | G |
SO4
SULFATE ION[5 atoms] |
A | 50.0 /41.6 |
4 /4 |
RB11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
5ldd[1] | H |
SO4
SULFATE ION[5 atoms] |
C | 80.0 /85.1 |
5 /5 |
G0SGE1_CHATD Rab small monomeric GTPase-like protein | |
5lef[2] | G |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /39.5 |
2 /2 |
RAB6A_HUMAN Ras-related protein Rab-6A | |
5lef[2] | L |
SO4
SULFATE ION[5 atoms] |
B | 50.0 /40.3 |
6 /6 |
RAB6A_HUMAN Ras-related protein Rab-6A | |
5xr4[1] | G |
SO4
SULFATE ION[5 atoms] |
B | 100.0 /42.0 |
5 /5 |
RAA1A_ARATH Ras-related protein RABA1a | |
6ekk[1] | R |
SO4
SULFATE ION[5 atoms] |
C | 33.3 /38.7 |
3 /3 |
RAB35_HUMAN Ras-related protein Rab-35 | |
1r2q[2] | D |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /43.7 |
2 /2 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1r2q[18] | E |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /43.7 |
1 /2 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1r2q[3] | F |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /43.7 |
4 /4 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
1r2q[4] | I |
GOL
GLYCEROL[6 atoms] |
A | 33.3 /43.7 |
6 /6 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
3bfk[1] | I |
GOL
GLYCEROL[6 atoms] |
B | 50.0 /38.6 |
10 /10 |
Q76NM4_PLAF7 Small GTPase Rab11 | |
3tso[2] | H |
GOL
GLYCEROL[6 atoms] |
A | 66.7 /39.6 |
6 /6 |
RAB25_HUMAN Ras-related protein Rab-25 | |
4gmx[2] | L |
GOL
GLYCEROL[6 atoms] |
A | 50.0 /34.0 |
2 /4 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
4iru[4] | M |
GOL
GLYCEROL[6 atoms] |
B | 100.0 /40.3 |
1 /1 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4lx0[1] | H |
GOL
GLYCEROL[6 atoms] |
A | 40.0 /42.7 |
5 /5 |
RB11A_HUMAN Ras-related protein Rab-11A | |
4wvf[1] | G |
GOL
GLYCEROL[6 atoms] |
A | 20.0 /34.0 |
5 /5 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
5jcz[1] | N |
GOL
GLYCEROL[6 atoms] |
A | 50.0 /42.7 |
2 /3 |
RB11A_HUMAN Ras-related protein Rab-11A | |
5jcz[1] | Q |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /42.7 |
1 /1 |
RB11A_HUMAN Ras-related protein Rab-11A | |
5lef[1] | H |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /39.5 |
4 /4 |
RAB6A_HUMAN Ras-related protein Rab-6A | |
6l6o[1] | C |
GOL
GLYCEROL[6 atoms] |
A | 50.0 /40.1 |
4 /5 |
A0A109NYM0_LEIDO Rab5a | |
6rir[1] | G |
GOL
GLYCEROL[6 atoms] |
A | 80.0 /41.5 |
5 /5 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
6whe[1] | G |
GOL
GLYCEROL[6 atoms] |
B | 0.0 /41.2 |
2 /2 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
7bwt[5] | M |
GOL
GLYCEROL[6 atoms] |
B | 75.0 /41.9 |
4 /4 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
7opq[2] | F |
GOL
GLYCEROL[6 atoms] |
A | 40.0 /40.9 |
5 /5 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
7opq[2] | G |
GOL
GLYCEROL[6 atoms] |
A | 60.0 /40.9 |
5 /5 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
7opq[4] | H |
GOL
GLYCEROL[6 atoms] |
A | 33.3 /40.9 |
6 /6 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
7opq[4] | J |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /40.9 |
1 /3 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
7opq[1] | K |
GOL
GLYCEROL[6 atoms] |
A | 16.7 /40.9 |
6 /6 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
7opr[2] | K |
GOL
GLYCEROL[6 atoms] |
A | 80.0 /40.9 |
5 /7 |
SYTL2_HUMAN RB27A_HUMAN Synaptotagmin-like protein 2,Ras-related protein R.. | |
1oix[1] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 85.7 /42.0 |
7 /7 |
R11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
1z0d[1] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 85.7 /44.3 |
7 /7 |
RAB5C_MOUSE Ras-related protein Rab-5C | |
2eqb[2] | D |
PO4
PHOSPHATE ION[5 atoms] |
A | 85.7 /39.0 |
7 /7 |
SEC4_YEAST Ras-related protein SEC4 | |
2gzh[2] | C |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /42.0 |
2 /3 |
RB11A_HUMAN Ras-related protein Rab-11A | |
3tso[1] | J |
PO4
PHOSPHATE ION[5 atoms] |
A | 33.3 /39.6 |
3 /3 |
RAB25_HUMAN Ras-related protein Rab-25 | |
3tso[1] | K |
PO4
PHOSPHATE ION[5 atoms] |
A | 0.0 /39.6 |
5 /5 |
RAB25_HUMAN Ras-related protein Rab-25 | |
6ixv[3] | I |
PO4
PHOSPHATE ION[5 atoms] |
E | 75.0 /42.7 |
8 /8 |
RB11A_HUMAN Ras-related protein Rab-11A | |
6zay[2] | E |
PO4
PHOSPHATE ION[5 atoms] |
A | 0.0 /40.6 |
3 /3 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zay[1] | F |
PO4
PHOSPHATE ION[5 atoms] |
A | 40.0 /40.6 |
5 /5 |
RB33B_HUMAN Ras-related protein Rab-33B | |
6zay[1] | N |
PO4
PHOSPHATE ION[5 atoms] |
C | 100.0 /40.6 |
1 /1 |
RB33B_HUMAN Ras-related protein Rab-33B | |
5lef[1] | M |
IPA
ISOPROPYL ALCOHOL[4 atoms] |
B | 50.0 /40.3 |
6 /6 |
RAB6A_HUMAN Ras-related protein Rab-6A | |
1k5g[4] | O |
AF3
ALUMINUM FLUORIDE[4 atoms] |
A | 88.9 /34.0 |
9 /9 |
RAN_HUMAN GTP-binding nuclear protein RAN | |
1n6k[13] | D |
AF3
ALUMINUM FLUORIDE[4 atoms] |
A | 85.7 /43.7 |
7 /7 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
4fmd[1] | O |
AF3
ALUMINUM FLUORIDE[4 atoms] |
F | 100.0 /42.3 |
6 /6 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4iru[3] | U |
AF3
ALUMINUM FLUORIDE[4 atoms] |
B | 90.0 /40.3 |
10 /10 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4jvs[1] | E |
AF3
ALUMINUM FLUORIDE[4 atoms] |
B | 77.8 /40.3 |
9 /9 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
1oiv[1] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 0.0 /42.7 |
4 /4 |
R11A_HUMAN RAS-RELATED PROTEIN RAB-11A | |
4gmx[16] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 25.0 /34.0 |
4 /4 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
4hay[1] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /34.2 |
1 /1 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
4kyi[1] | N |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 50.0 /44.3 |
6 /6 |
RAB5C_HUMAN Ras-related protein Rab-5C | |
4kyi[2] | O |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 50.0 /44.3 |
4 /4 |
RAB5C_HUMAN Ras-related protein Rab-5C | |
5jcz[2] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 70.0 /42.7 |
10 /10 |
RB11A_HUMAN Ras-related protein Rab-11A | |
5jcz[1] | K |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 50.0 /42.7 |
2 /2 |
RB11A_HUMAN Ras-related protein Rab-11A | |
5jcz[2] | L |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /42.7 |
5 /5 |
RB11A_HUMAN Ras-related protein Rab-11A | |
5jcz[4] | P |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /42.7 |
1 /1 |
RB11A_HUMAN Ras-related protein Rab-11A | |
6a38[5] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 25.0 /34.0 |
4 /4 |
RAN_HUMAN GTP-binding nuclear protein Ran | |
6s5h[1] | C |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /38.9 |
2 /2 |
RAB38_HUMAN Ras-related protein Rab-38 | |
6s5h[1] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 33.3 /38.9 |
3 /3 |
RAB38_HUMAN Ras-related protein Rab-38 | |
6s5h[1] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /38.9 |
1 /1 |
RAB38_HUMAN Ras-related protein Rab-38 | |
6zay[1] | P |
EDO
1,2-ETHANEDIOL[4 atoms] |
C | 33.3 /40.6 |
3 /4 |
RB33B_HUMAN Ras-related protein Rab-33B | |
8jqu[1] | B |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 0.0 /40.1 |
2 /2 |
A0A109NYM0_LEIDO Rab5a | |
4iru[1] | V |
ACT
ACETATE ION[4 atoms] |
B | 33.3 /40.3 |
3 /3 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4iru[2] | W |
ACT
ACETATE ION[4 atoms] |
B | 50.0 /40.3 |
4 /4 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4iru[1] | BA |
ACT
ACETATE ION[4 atoms] |
D | 100.0 /40.3 |
1 /1 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4iru[1] | LA |
ACT
ACETATE ION[4 atoms] |
D | 50.0 /40.3 |
4 /4 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4iru[1] | Z |
ACT
ACETATE ION[4 atoms] |
D | 100.0 /40.3 |
1 /1 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
5jcz[1] | M |
ACT
ACETATE ION[4 atoms] |
A | 40.0 /42.7 |
5 /5 |
RB11A_HUMAN Ras-related protein Rab-11A | |
6l6o[1] | D |
ACT
ACETATE ION[4 atoms] |
A | 0.0 /40.1 |
1 /1 |
A0A109NYM0_LEIDO Rab5a | |
1n6h[7] | D |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 25.0 /43.7 |
4 /5 |
RAB5A_HUMAN Ras-related protein Rab-5A | |
2bme[1] | H |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
A | 0.0 /39.6 |
5 /5 |
RAB4A_HUMAN RAS-RELATED PROTEIN RAB4A | |
2bme[1] | N |
BME
BETA-MERCAPTOETHANOL[4 atoms] |
C | 100.0 /39.6 |
3 /3 |
RAB4A_HUMAN RAS-RELATED PROTEIN RAB4A | |
3tnf[1] | E |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 33.3 /41.9 |
3 /3 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
3tnf[2] | F |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 66.7 /41.9 |
3 /3 |
RAB8A_HUMAN Ras-related protein Rab-8A | |
7eq2[2] | G |
MPD
(4S)-2-METHYL-2,4-PENTANEDIOL[8 atoms] |
A | 66.7 /39.3 |
6 /6 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
7eq2[1] | M |
CAC
CACODYLATE ION[5 atoms] |
B | 100.0 /39.3 |
2 /2 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
7eq2[1] | N |
CAC
CACODYLATE ION[5 atoms] |
B | 33.3 /39.3 |
3 /3 |
RAB1A_HUMAN Ras-related protein Rab-1A | |
4rke[1] | D |
1PE
PENTAETHYLENE GLYCOL[10 atoms] |
A | 0.0 /38.1 |
5 /6 |
O18333_DROME GH01619p | |
4rke[1] | E |
1PE
PENTAETHYLENE GLYCOL[7 atoms] |
A | 20.0 /38.1 |
5 /5 |
O18333_DROME GH01619p | |
4rkf[1] | E |
1PE
PENTAETHYLENE GLYCOL[13 atoms] |
A | 14.3 /35.8 |
7 /7 |
RAB3_DROME Ras-related protein Rab-3 | |
4rkf[2] | F |
1PE
PENTAETHYLENE GLYCOL[10 atoms] |
A | 42.9 /35.8 |
7 /7 |
RAB3_DROME Ras-related protein Rab-3 | |
4rkf[1] | I |
1PE
PENTAETHYLENE GLYCOL[10 atoms] |
B | 0.0 /35.8 |
10 /10 |
RAB3_DROME Ras-related protein Rab-3 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |