Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
835891 | 346 | 189 | YP_009725310.1() | |
QUERYSEQ |
SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKG LQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ |
346 | region | name | description |
1-1 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
346 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
5sbf | B | 100.0 | R1AB_SARS2 Uridylate-specific endoribonuclease | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
NUCLEOTIDE | |||||||
346 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6x1b[6] | C | DNA (5'-R(*GP*U)-3') | A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n06[6] | G | RNA (5'-R(*AP*UP*A)-3') | A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n06[3] | H | RNA (5'-R(*AP*UP*A)-3') | A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n33[6] | G | RNA (5'-R(*A)-D(*(UFT))-R(P*A)-3') | A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
8ud3[1] | G | RNA (35-MER) | D | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Non-structural protein 15 | |
8ud3[1] | G | RNA (35-MER) | E | 100.0 /99.7 |
12 /12 |
R1AB_SARS2 Non-structural protein 15 | |
8ud3[1] | H | RNA (35-MER) | D | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Non-structural protein 15 | |
8ud3[1] | H | RNA (35-MER) | E | 100.0 /99.7 |
7 /7 |
R1AB_SARS2 Non-structural protein 15 | |
8ud4[1] | G | RNA (35-MER) | D | 100.0 /99.7 |
5 /5 |
R1AB_SARS2 Non-structural protein 15 | |
8ud4[1] | G | RNA (35-MER) | E | 100.0 /99.7 |
14 /14 |
R1AB_SARS2 Non-structural protein 15 | |
8ud4[1] | H | RNA (35-MER) | D | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Non-structural protein 15 | |
8ud4[1] | H | RNA (35-MER) | E | 100.0 /99.7 |
8 /8 |
R1AB_SARS2 Non-structural protein 15 | |
8ud5[1] | G | RNA (35-MER) | B | 100.0 /99.7 |
6 /6 |
R1AB_SARS2 Non-structural protein 15 | |
8ud5[1] | G | RNA (35-MER) | D | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Non-structural protein 15 | |
8ud5[1] | G | RNA (35-MER) | E | 100.0 /99.7 |
14 /14 |
R1AB_SARS2 Non-structural protein 15 | |
8ud5[1] | H | RNA (35-MER) | B | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Non-structural protein 15 | |
8ud5[1] | H | RNA (35-MER) | D | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Non-structural protein 15 | |
8ud5[1] | H | RNA (35-MER) | E | 100.0 /99.7 |
7 /7 |
R1AB_SARS2 Non-structural protein 15 | |
7tj2[1] | G | RNA (31-MER) | A | 100.0 /99.7 |
11 /11 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | G | RNA (31-MER) | C | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | G | RNA (31-MER) | E | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | H | RNA (31-MER) | A | 100.0 /99.7 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | H | RNA (31-MER) | C | 100.0 /99.7 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | H | RNA (31-MER) | E | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tqv[1] | G | RNA (33-MER) | A | 100.0 /99.7 |
11 /11 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7tqv[1] | G | RNA (33-MER) | C | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7tqv[1] | G | RNA (33-MER) | E | 100.0 /99.7 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7tqv[1] | H | RNA (33-MER) | A | 100.0 /99.7 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7tqv[1] | H | RNA (33-MER) | C | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7tqv[1] | H | RNA (33-MER) | E | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
346 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
5s6x[6] | D |
WUG
1-(2,4-dimethyl-1H-imidazol-5-yl)methanamine[9 ato.. |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s6y[3] | D |
WUJ
N-[(furan-2-yl)methyl]urea[10 atoms] |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s6y[3] | F |
WUJ
N-[(furan-2-yl)methyl]urea[10 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s6z[6] | D |
WUM
4-[(dimethylamino)methyl]-1,3-thiazol-2-amine[10 a.. |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s70[3] | E |
WUS
(5R)-2-methyl-4,5,6,7-tetrahydro-1H-benzimidazol-5.. |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s71[6] | D |
WUV
5'-thiothymidine[17 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s71[6] | D |
WUV
5'-thiothymidine[17 atoms] |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s72[3] | D |
WUY
N-(2-aminoethyl)-N'-phenylurea[13 atoms] |
A | 100.0 /100.0 |
10 /10 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s72[3] | D |
WUY
N-(2-aminoethyl)-N'-phenylurea[13 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa4[3] | C |
K3A
N-(5-methyl-1H-pyrazol-3-yl)acetamide[10 atoms] |
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa5[3] | E |
ZQA
4-ethyl-2-(1H-imidazol-5-yl)-1,3-thiazole[12 atoms.. |
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa6[6] | C |
O3G
N-benzyl-1-(4-fluorophenyl)methanamine[16 atoms] |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa6[6] | C |
O3G
N-benzyl-1-(4-fluorophenyl)methanamine[16 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa7[6] | C |
WL7
4-amino-N-(2-hydroxyethyl)-N-methylbenzene-1-sulfo.. |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa8[6] | C |
JOV
3-chloro-N-(1-hydroxy-2-methylpropan-2-yl)benzamid.. |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa8[3] | C |
JOV
3-chloro-N-(1-hydroxy-2-methylpropan-2-yl)benzamid.. |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa8[3] | D |
JOV
3-chloro-N-(1-hydroxy-2-methylpropan-2-yl)benzamid.. |
B | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sa9[3] | C |
GWG
1-methylindazole-3-carboxamide[13 atoms] |
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5saa[6] | D |
ZQD
3-[(2S)-1-(methanesulfonyl)pyrrolidin-2-yl]-5-meth.. |
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sab[3] | E |
WJD
2-methoxy-N-phenylacetamide[12 atoms] |
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sac[3] | E |
VWG
N-hydroxyquinoline-2-carboxamide[14 atoms] |
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sad[3] | C |
EJW
(3-phenyl-1,2-oxazol-5-yl)methylazanium[13 atoms] |
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sae[6] | D |
W3G
pyridazin-3(2H)-one[7 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5saf[6] | D |
WOY
6,7-dihydro-5H-pyrrolo[2,3-d]pyrimidine[9 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sag[3] | C |
ZQG
3-(1H-imidazol-2-yl)propan-1-amine[9 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sag[3] | C |
ZQG
3-(1H-imidazol-2-yl)propan-1-amine[9 atoms] |
B | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sah[3] | C |
ZQJ
2-methyl-5,6,7,8-tetrahydropyrido[4,3-c]pyridazin-.. |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sah[3] | D |
ZQJ
2-methyl-5,6,7,8-tetrahydropyrido[4,3-c]pyridazin-.. |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5sai[3] | C |
ZQM
N-{2-[(propan-2-yl)sulfanyl]phenyl}urea[14 atoms] |
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[6] | C |
U5P
URIDINE-5'-MONOPHOSPHATE[21 atoms] |
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k0r[6] | G |
U5P
URIDINE-5'-MONOPHOSPHATE[21 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wxc[6] | C |
CMU
5-CHLORO-6-(1-(2-IMINOPYRROLIDINYL) METHYL) URACIL.. |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x4i[6] | C |
U3P
3'-URIDINEMONOPHOSPHATE[21 atoms] |
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k1l[6] | C |
UVC
URIDINE-2',3'-VANADATE[21 atoms] |
A | 100.0 /100.0 |
13 /13 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k1o[6] | D |
VQV
1-(3,5-di-O-phosphono-alpha-L-xylofuranosyl)pyrimi.. |
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7keh[6] | C |
B3P
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PR.. |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7keh[3] | E |
B3P
2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PR.. |
B | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n7r[3] | C |
S6V
1-[2-(2-oxidanylidenepyrrolidin-1-yl)ethyl]-3-phen.. |
B | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n7u[6] | C |
0MI
1-[(2~{R},4~{S},5~{R})-5-[[(azanylidene-$l^{4}-aza.. |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n7u[6] | C |
0MI
1-[(2~{R},4~{S},5~{R})-5-[[(azanylidene-$l^{4}-aza.. |
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n7w[3] | C |
0OI
N-(2-fluorophenyl)-N'-methylurea[12 atoms] |
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n7y[6] | C |
RZG
methyl 4-sulfamoylbenzoate[14 atoms] |
A | 100.0 /100.0 |
14 /14 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n83[6] | D |
WNM
(3S)-1-(phenylsulfonyl)pyrrolidin-3-amine[15 atoms.. |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n83[6] | D |
WNM
(3S)-1-(phenylsulfonyl)pyrrolidin-3-amine[15 atoms.. |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n83[6] | E |
WNM
(3S)-1-(phenylsulfonyl)pyrrolidin-3-amine[15 atoms.. |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n83[6] | E |
WNM
(3S)-1-(phenylsulfonyl)pyrrolidin-3-amine[15 atoms.. |
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n83[6] | F |
WNM
(3S)-1-(phenylsulfonyl)pyrrolidin-3-amine[15 atoms.. |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n83[3] | G |
WNM
(3S)-1-(phenylsulfonyl)pyrrolidin-3-amine[15 atoms.. |
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
346 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6vww[3] | E |
MG
MAGNESIUM ION[1 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x4i[3] | P |
NA
SODIUM ION[1 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | L |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
8u2x[3] | D |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
8u2x[3] | E |
CL
CHLORIDE ION[1 atoms] |
A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
346 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
5s6x[320] | A | R1AB_SARS2 Uridylate-specific endoribonuclease[348 aa] | A | 100.0 /100.0 |
27 /27 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s6x[203] | A | R1AB_SARS2 Uridylate-specific endoribonuclease[348 aa] | A | 100.0 /100.0 |
27 /27 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s6x[305] | B | R1AB_SARS2 Uridylate-specific endoribonuclease[348 aa] | A | 100.0 /100.0 |
14 /15 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s6y[30] | B | R1AB_SARS2 Uridylate-specific endoribonuclease[348 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[57] | A | R1AB_SARS2 Uridylate-specific endoribonuclease[348 aa] | A | 100.0 /100.0 |
26 /26 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[12] | B | R1AB_SARS2 Uridylate-specific endoribonuclease[347 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k0r[42] | C | R1AB_SARS2 Uridylate-specific endoribonuclease[345 aa] | A | 100.0 /100.0 |
20 /20 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k0r[4] | F | R1AB_SARS2 Uridylate-specific endoribonuclease[345 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k9p[12] | B | R1AB_SARS2 Uridylate-specific endoribonuclease[349 aa] | A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7me0[6] | C | R1AB_SARS2 Uridylate-specific endoribonuclease[347 aa] | A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7me0[12] | E | R1AB_SARS2 Uridylate-specific endoribonuclease[347 aa] | A | 100.0 /100.0 |
25 /25 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n06[6] | B | R1AB_SARS2 Uridylate-specific endoribonuclease[347 aa] | A | 100.0 /100.0 |
24 /24 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7n06[6] | C | R1AB_SARS2 Uridylate-specific endoribonuclease[347 aa] | A | 100.0 /100.0 |
23 /23 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
8d34[6] | B | R1AB_SARS2 Uridylate-specific endoribonuclease nsp15[348 aa] | A | 100.0 /99.7 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | D | R1AB_SARS2 Uridylate-specific endoribonuclease nsp15[271 aa] | A | 100.0 /99.7 |
12 /14 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | D | R1AB_SARS2 Uridylate-specific endoribonuclease nsp15[271 aa] | E | 100.0 /99.7 |
21 /21 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
7tj2[1] | D | R1AB_SARS2 Uridylate-specific endoribonuclease nsp15[271 aa] | F | 100.0 /99.7 |
25 /25 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
8u2x[3] | B | R1AB_SARS2 Uridylate-specific endoribonuclease nsp15[310 aa] | B | 100.0 /99.7 |
20 /20 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
8u2x[3] | B | R1AB_SARS2 Uridylate-specific endoribonuclease nsp15[310 aa] | B | 100.0 /99.7 |
19 /19 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
2h85[12] | A | Q6VA80_CVHSA Putative orf1ab polyprotein[347 aa] | A | 85.7 /88.1 |
28 /28 |
Q6VA80_CVHSA Putative orf1ab polyprotein | |
2h85[6] | A | Q6VA80_CVHSA Putative orf1ab polyprotein[347 aa] | A | 85.2 /88.1 |
27 /27 |
Q6VA80_CVHSA Putative orf1ab polyprotein | |
2h85[6] | A | Q6VA80_CVHSA Putative orf1ab polyprotein[347 aa] | A | 92.9 /88.1 |
14 /16 |
Q6VA80_CVHSA Putative orf1ab polyprotein | |
2ozk[2] | B | R1AB_CVHSA Uridylate-specific endoribonuclease[305 aa] | A | 86.7 /88.6 |
30 /30 |
R1AB_CVHSA Uridylate-specific endoribonuclease | |
2ozk[4] | C | R1AB_CVHSA Uridylate-specific endoribonuclease[291 aa] | A | 81.8 /88.6 |
11 /11 |
R1AB_CVHSA Uridylate-specific endoribonuclease | |
2ozk[2] | D | R1AB_CVHSA Uridylate-specific endoribonuclease[296 aa] | A | 66.7 /88.6 |
3 /3 |
R1AB_CVHSA Uridylate-specific endoribonuclease | |
2ozk[2] | A | R1AB_CVHSA Uridylate-specific endoribonuclease[306 aa] | C | 85.7 /88.3 |
14 /14 |
R1AB_CVHSA Uridylate-specific endoribonuclease | |
2rhb[6] | B | R1AB_CVHSA Uridylate-specific endoribonuclease[346 aa] | A | 88.0 /88.4 |
25 /25 |
R1AB_CVHSA Uridylate-specific endoribonuclease | |
2rhb[6] | E | R1AB_CVHSA Uridylate-specific endoribonuclease[346 aa] | A | 93.8 /88.4 |
16 /17 |
R1AB_CVHSA Uridylate-specific endoribonuclease | |
5yvd[6] | A | A0A0U2GPI9_9BETC Nsp15[341 aa] | A | 41.4 /51.9 |
29 /29 |
A0A0U2GPI9_9BETC Nsp15 | |
5yvd[6] | A | A0A0U2GPI9_9BETC Nsp15[341 aa] | A | 40.0 /51.9 |
25 /25 |
A0A0U2GPI9_9BETC Nsp15 | |
5yvd[6] | B | A0A0U2GPI9_9BETC Nsp15[341 aa] | A | 61.5 /51.9 |
13 /14 |
A0A0U2GPI9_9BETC Nsp15 | |
5yvd[6] | B | A0A0U2GPI9_9BETC Nsp15[341 aa] | A | 25.0 /51.9 |
4 /4 |
A0A0U2GPI9_9BETC Nsp15 | |
5yvd[6] | B | A0A0U2GPI9_9BETC Nsp15[341 aa] | A | 100.0 /51.9 |
1 /1 |
A0A0U2GPI9_9BETC Nsp15 | |
2gth[12] | A | R1AB_CVMA5 Replicase polyprotein 1ab[348 aa] | A | 33.3 /49.5 |
24 /24 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gth[12] | A | R1AB_CVMA5 Replicase polyprotein 1ab[348 aa] | A | 47.8 /49.5 |
23 /24 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gth[12] | A | R1AB_CVMA5 Replicase polyprotein 1ab[348 aa] | A | 57.9 /49.5 |
19 /20 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gth[12] | A | R1AB_CVMA5 Replicase polyprotein 1ab[348 aa] | A | 37.5 /49.5 |
8 /8 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
4rs4[18] | B | R1AB_CVH22 Uridylate-specific endoribonuclease[345 aa] | A | 60.0 /45.3 |
15 /17 |
R1AB_CVH22 Uridylate-specific endoribonuclease | |
4rs4[18] | C | R1AB_CVH22 Uridylate-specific endoribonuclease[332 aa] | A | 44.4 /45.3 |
18 /21 |
R1AB_CVH22 Uridylate-specific endoribonuclease | |
4rs4[18] | D | R1AB_CVH22 Uridylate-specific endoribonuclease[337 aa] | A | 33.3 /45.3 |
27 /27 |
R1AB_CVH22 Uridylate-specific endoribonuclease | |
4rs4[18] | F | R1AB_CVH22 Uridylate-specific endoribonuclease[346 aa] | A | 16.7 /45.3 |
6 /6 |
R1AB_CVH22 Uridylate-specific endoribonuclease | |
5da1[1] | B | E3V2B6_PRRSV endoribonuclease[205 aa] | A | 18.8 /30.1 |
16 /16 |
E3V2B6_PRRSV endoribonuclease | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
346 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
2gti[6] | C |
SO4
SULFATE ION[5 atoms] |
A | 60.0 /49.2 |
5 /5 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gti[6] | D |
SO4
SULFATE ION[5 atoms] |
A | 20.0 /49.2 |
5 /5 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gti[6] | E |
SO4
SULFATE ION[5 atoms] |
A | 0.0 /49.2 |
3 /3 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gti[6] | G |
SO4
SULFATE ION[5 atoms] |
A | 50.0 /49.2 |
2 /2 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gti[6] | H |
SO4
SULFATE ION[5 atoms] |
A | 50.0 /49.2 |
2 /3 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gti[6] | I |
SO4
SULFATE ION[5 atoms] |
A | 33.3 /49.2 |
3 /3 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
6wlc[3] | L |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k1l[6] | G |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7keh[6] | D |
SO4
SULFATE ION[5 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
2gti[6] | J |
GOL
GLYCEROL[6 atoms] |
A | 60.0 /49.2 |
5 /5 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gti[6] | K |
GOL
GLYCEROL[6 atoms] |
A | 0.0 /49.2 |
1 /1 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
2gti[6] | K |
GOL
GLYCEROL[6 atoms] |
A | 25.0 /49.2 |
4 /4 |
R1AB_CVMA5 Replicase polyprotein 1ab | |
5yvd[6] | C |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /51.9 |
6 /6 |
A0A0U2GPI9_9BETC Nsp15 | |
6vww[6] | C |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | C |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | D |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[6] | F |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[6] | G |
GOL
GLYCEROL[6 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | I |
GOL
GLYCEROL[6 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | N |
GOL
GLYCEROL[6 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
4s1t[18] | G |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /45.0 |
5 /5 |
R1AB_CVH22 Uridylate-specific endoribonuclease | |
6wxc[12] | D |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k0r[6] | H |
PO4
PHOSPHATE ION[5 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
5s6x[96] | C |
CIT
CITRIC ACID[13 atoms] |
A | 100.0 /100.0 |
11 /11 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[12] | N |
CIT
CITRIC ACID[13 atoms] |
A | 100.0 /100.0 |
9 /9 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | H |
ACY
ACETIC ACID[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | O |
ACY
ACETIC ACID[4 atoms] |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6vww[3] | P |
ACY
ACETIC ACID[4 atoms] |
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[24] | C |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[18] | D |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[6] | E |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[12] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[15] | I |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[6] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[6] | K |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[3] | L |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[3] | M |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[9] | O |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[12] | P |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[18] | R |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[15] | BA |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[21] | CA |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[3] | S |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[9] | T |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[3] | V |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | J |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[12] | K |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wxc[3] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x1b[3] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x1b[3] | H |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x4i[12] | D |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x4i[3] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x4i[3] | G |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x4i[6] | I |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6x4i[3] | X |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k1l[3] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k1l[3] | F |
EDO
1,2-ETHANEDIOL[4 atoms] |
B | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[3] | G |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6w01[6] | H |
PEG
DI(HYDROXYETHYL)ETHER[7 atoms] |
A | 100.0 /100.0 |
6 /6 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | F |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | Q |
ACT
ACETATE ION[4 atoms] |
B | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | S |
ACT
ACETATE ION[4 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | T |
ACT
ACETATE ION[4 atoms] |
B | 100.0 /100.0 |
7 /7 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6xdh[6] | C |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6xdh[6] | C |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6xdh[3] | K |
ACT
ACETATE ION[4 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
7k1l[3] | E |
ACT
ACETATE ION[4 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | U |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | U |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | V |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wxc[6] | K |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /100.0 |
2 /2 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wxc[3] | K |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wxc[3] | P |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
4 /4 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wxc[6] | Q |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6xdh[3] | F |
FMT
FORMIC ACID[3 atoms] |
A | 100.0 /100.0 |
8 /8 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6xdh[3] | G |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6xdh[3] | I |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
5 /5 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6xdh[3] | M |
FMT
FORMIC ACID[3 atoms] |
B | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[6] | D |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 100.0 /100.0 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
6wlc[3] | N |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
B | 100.0 /100.0 |
1 /1 |
R1AB_SARS2 Uridylate-specific endoribonuclease | |
8u2x[6] | C |
TRS
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL[8 atoms] |
A | 100.0 /99.7 |
3 /3 |
R1AB_SARS2 Uridylate-specific endoribonuclease nsp15 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |