Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
3721728 | 529 | 16 | P52292(IMA1_HUMAN) | RecName: Full=Importin subunit alpha-1 ;AltName: Full=Karyopherin subunit alpha-2;AltName: Full=RAG cohort protein 1;AltName: Full=SRP1-alpha; |
QUERYSEQ |
MSTNENANTPAARLHRFKNKGKDSTEMRRRRIEVNVELRKAKKDDQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASG TSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVK LLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQA AEKLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFSVEEEEDQNVVPETTSEGYTFQVQDGAPGTFNF |
529 |
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region | name | description |
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2-529 | CHAIN | /note="Importin subunit alpha-1" /id="PRO_0000120722" |
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2-60 | DOMAIN | /note="IBB" |
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71-111 | REPEAT | /note="ARM 1; truncated" |
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112-151 | REPEAT | /note="ARM 2" |
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152-193 | REPEAT | /note="ARM 3" |
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200-244 | REPEAT | /note="ARM 4" |
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246-282 | REPEAT | /note="ARM 5" |
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283-322 | REPEAT | /note="ARM 6" |
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325-364 | REPEAT | /note="ARM 7" |
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367-409 | REPEAT | /note="ARM 8" |
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410-456 | REPEAT | /note="ARM 9" |
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457-496 | REPEAT | /note="ARM 10; atypical" |
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1-27 | REGION | /note="Disordered" |
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43-72 | REGION | /note="Disordered" |
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142-238 | REGION | /note="NLS binding site (major)" |
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315-403 | REGION | /note="NLS binding site (minor)" |
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55-72 | COMPBIAS | /note="Polar residues" |
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1-529 | DISORDER | predicted by DISOPRED |
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529 | |||||||
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pdb_id | a1 | identity[%]2 | description | |||
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A | 100.0 | IMA1_HUMAN Importin subunit alpha-1 | |||
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B | 100.0 | IMA1_HUMAN Importin subunit alpha-1 | |||
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B | 100.0 | IMA2_HUMAN PROTEIN (IMPORTIN ALPHA-2 SUBUNIT) | |||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
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529 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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A | IMB1_HUMAN PROTEIN (IMPORTIN BETA SUBUNIT)[876 aa] | B | 100.0 /100.0 |
25 /25 |
IMA2_HUMAN PROTEIN (IMPORTIN ALPHA-2 SUBUNIT) |
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A | NCBP1_HUMAN Nuclear cap-binding protein subunit 1[756 aa] | C | 100.0 /100.0 |
39 /39 |
IMA2_HUMAN Importin subunit alpha-2 |
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B | TAF8_HUMAN Transcription initiation factor TFIID subunit 8[9 .. | A | 100.0 /100.0 |
20 /20 |
IMA1_HUMAN Importin subunit alpha-1 |
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C | TAF8_HUMAN Transcription initiation factor TFIID subunit 8[3 .. | A | 100.0 /100.0 |
8 /8 |
IMA1_HUMAN Importin subunit alpha-1 |
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B | KAT8_HUMAN Histone acetyltransferase KAT8[10 aa] | A | 100.0 /100.0 |
21 /21 |
IMA1_HUMAN Importin subunit alpha-1 |
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C | KAT8_HUMAN Histone acetyltransferase KAT8[15 aa] | A | 100.0 /100.0 |
30 /30 |
IMA1_HUMAN Importin subunit alpha-1 |
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A | HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K[20 aa] | B | 100.0 /100.0 |
44 /44 |
IMA1_HUMAN Importin subunit alpha-1 |
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B | BIMAX2[25 aa] | A | 100.0 /100.0 |
57 /57 |
IMA1_HUMAN Importin subunit alpha-1 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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529 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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F |
MG
|
C | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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529 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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B | IMA1_HUMAN Importin subunit alpha-1[422 aa] | A | 100.0 /100.0 |
42 /42 |
IMA1_HUMAN Importin subunit alpha-1 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
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529 | pdb_id | contact mol | homologue | ||||
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a3 | description | a4 | identity[%]5 | Ncon6 | description | |
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C |
PEG
|
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 |
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D |
PEG
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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E |
PEG
|
A | 100.0 /100.0 |
5 /5 |
IMA1_HUMAN Importin subunit alpha-1 |
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F |
PEG
|
A | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 |
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G |
PEG
|
A | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 |
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H |
PEG
|
A | 100.0 /100.0 |
6 /6 |
IMA1_HUMAN Importin subunit alpha-1 |
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I |
PEG
|
A | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 |
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J |
PEG
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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K |
PEG
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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L |
PEG
|
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 |
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M |
PEG
|
A | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 |
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P |
PEG
|
B | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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R |
PEG
|
B | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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S |
PEG
|
B | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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D |
EDO
|
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 |
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E |
EDO
|
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 |
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F |
EDO
|
A | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 |
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H |
EDO
|
A | 100.0 /100.0 |
5 /5 |
IMA1_HUMAN Importin subunit alpha-1 |
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I |
EDO
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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J |
EDO
|
A | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 |
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K |
EDO
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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L |
EDO
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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M |
EDO
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
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N |
EDO
|
A | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 |
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E |
ACT
|
B | 100.0 /100.0 |
2 /2 |
IMA1_HUMAN Importin subunit alpha-1 |
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H |
ACT
|
D | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 |
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I |
ACT
|
D | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 |
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J |
ACT
|
D | 100.0 /100.0 |
1 /1 |
IMA1_HUMAN Importin subunit alpha-1 |
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G |
GOL
|
D | 100.0 /100.0 |
4 /4 |
IMA1_HUMAN Importin subunit alpha-1 |
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E |
MES
|
A | 100.0 /100.0 |
3 /3 |
IMA1_HUMAN Importin subunit alpha-1 |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |