Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
3014331 | 302 | 7 | P56962(STX17_HUMAN) | RecName: Full=Syntaxin-17 ; |
QUERYSEQ |
MSEDEEKVKLRRLEPAIQKFIKIVIPTDLERLRKHQINIEKYQRCRIWDKLHEEHINAGRTVQQLRSNIREIEKLCLKVRKDDLVLLKRMIDPVKEEASAATAEFLQLHLESVEELKKQFNDEETLLQPPLTRSMTVGGAFHTTEAEASS QSLTQIYALPEIPQDQNAAESWETLEADLIELSQLVTDFSLLVNSQQEKIDSIADHVNSAAVNVEEGTKNLGKAAKYKLAALPVAGALIGGMVGGPIGLLAGFKVAGIAAALGGGVLGFTGGKLIQRKKQKMMEKLTSSCPDLPSQTDKK CS |
302 | region | name | description |
2-302 | CHAIN | /note="Syntaxin-17" /id="PRO_0000210228" | |
2-228 | TOPO_DOM | /note="Cytoplasmic" | |
229-249 | TRANSMEM | /note="Helical" | |
250-254 | TOPO_DOM | /note="Lumenal" | |
255-275 | TRANSMEM | /note="Helical" | |
276-302 | TOPO_DOM | /note="Cytoplasmic" | |
162-224 | DOMAIN | /note="t-SNARE coiled-coil homology" | |
229-275 | REGION | /note="Necessary and sufficient for localization to autophagosome" | |
53-123 | COILED | ||
1-302 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
302 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
7bv6 | F | 100.0 | STX17_HUMAN Syntaxin-17 | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
302 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4wy4[7] | A | VAMP8_HUMAN Vesicle-associated membrane protein 8[64 aa] | B | 100.0 /100.0 |
30 /30 |
STX17_HUMAN Syntaxin-17 | |
4wy4[7] | C | SNP29_HUMAN Synaptosomal-associated protein 29[78 aa] | B | 100.0 /100.0 |
24 /24 |
STX17_HUMAN Syntaxin-17 | |
4wy4[1] | D | SNP29_HUMAN Synaptosomal-associated protein 29[65 aa] | B | 100.0 /100.0 |
4 /4 |
STX17_HUMAN Syntaxin-17 | |
7bv6[6] | D | SNP29_HUMAN Synaptosomal-associated protein 29[67 aa] | B | 100.0 /100.0 |
5 /5 |
STX17_HUMAN Syntaxin-17 | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |