Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
2711687 | 385 | 16 | P35613(BASI_HUMAN) | RecName: Full=Basigin ;AltName: Full=5F7;AltName: Full=Collagenase stimulatory factor;AltName: Full=Extracellular matrix metalloproteinase inducer; Short=EMMPRIN;AltName: Full=Hepatoma-associated antigen ; Short=HAb18G ;AltName: Full=Leukocyte activation antigen M6;AltName: Full=OK blood group antigen;AltName: Full=Tumor cell-derived collagenase stimulatory factor; Short=TCSF;AltName: CD_antigen=CD147;Flags: Precursor; |
QUERYSEQ |
MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLG SKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYR CNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS |
385 | region | name | description |
1-21 | SIGNAL | ||
22-385 | CHAIN | /note="Basigin" /id="PRO_0000014518" | |
138-323 | TOPO_DOM | /note="Extracellular" | |
324-344 | TRANSMEM | /note="Helical" | |
345-385 | TOPO_DOM | /note="Cytoplasmic" | |
37-120 | DOMAIN | /note="Ig-like" | |
138-219 | DOMAIN | /note="Ig-like C2-type" | |
221-315 | DOMAIN | /note="Ig-like V-type" | |
353-385 | REGION | /note="Disordered" | |
356132195-199 | REGION | /note="Essential for interaction with KDR/VEGFR2" | |
1-385 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
385 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
7da5 | B | 100.0 | BASI_HUMAN Basigin | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4u0q[1] | A | B2L3N7_PLAFA Reticulocyte binding protein 5[286 aa] | B | 100.0 /100.0 |
24 /25 |
BASI_HUMAN Basigin | |
4u0q[1] | C | B2L3N7_PLAFA Reticulocyte binding protein 5[285 aa] | D | 100.0 /100.0 |
20 /21 |
BASI_HUMAN Basigin | |
5x0t[2] | A | 6H8 Fab fragment heavy chain[215 aa] | E | 100.0 /100.0 |
9 /9 |
BASI_HUMAN Basigin | |
5x0t[2] | C | 6H8 Fab fragment light chain[213 aa] | E | 100.0 /100.0 |
7 /7 |
BASI_HUMAN Basigin | |
6lyy[5] | A | MOT1_HUMAN Monocarboxylate transporter 1[382 aa] | B | 100.0 /100.0 |
10 /10 |
BASI_HUMAN Basigin | |
7xy8[2] | C | heavy chain[212 aa] | A | 100.0 /100.0 |
15 /15 |
BASI_HUMAN Isoform 2 of Basigin | |
7xy8[2] | E | light chain[214 aa] | A | 100.0 /100.0 |
8 /8 |
BASI_HUMAN Isoform 2 of Basigin | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
3b5h[1] | E |
ACT
ACETATE ION[4 atoms] |
D | 100.0 /100.0 |
2 /2 |
Q54A51_HUMAN Cervical EMMPRIN | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |