Contact Molecules for Homologous Proteins

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PID QueryLength Homolgous Sequence in PDB UniProt Query TITLE
2711687 385 29 P35613(BASI_HUMAN) RecName: Full=Basigin ;AltName: Full=5F7;AltName: Full=Collagenase stimulatory factor;AltName: Full=Extracellular matrix metalloproteinase inducer; Short=EMMPRIN;AltName: Full=Hepatoma-associated antigen ; Short=HAb18G ;AltName: Full=Leukocyte activation antigen M6;AltName: Full=OK blood group antigen;AltName: Full=Tumor cell-derived collagenase stimulatory factor; Short=TCSF;AltName: CD_antigen=CD147;Flags: Precursor;
QUERYSEQ 
MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLG
SKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYR
CNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS
[BLAST file for PDB] (plain) (bar) (multiple alignment) [BLAST for UniProt: (plain) (bar) (multiple alignment) (PSSM file) ]

UniProt Feature Tables [P35613(BASI_HUMAN)]

385
region name description
1-21 SIGNAL
22-385 CHAIN /note="Basigin" /id="PRO_0000014518"
138-323 TOPO_DOM /note="Extracellular"
324-344 TRANSMEM /note="Helical"
345-385 TOPO_DOM /note="Cytoplasmic"
37-120 DOMAIN /note="Ig-like"
138-219 DOMAIN /note="Ig-like C2-type"
221-315 DOMAIN /note="Ig-like V-type"
353-385 REGION /note="Disordered"
356132195-199 REGION /note="Essential for interaction with KDR/VEGFR2"
1-385 DISORDER predicted by DISOPRED

MONOMER
385
pdb_id a1 identity[%]2 description
7da5 B 100.0 BASI_HUMAN Basigin
7cko B 100.0 BASI_HUMAN Basigin
6lz0 B 100.0 BASI_HUMAN Basigin
6lyy B 100.0 BASI_HUMAN Basigin
7ckr B 100.0 BASI_HUMAN Basigin
3b5h B 100.0 Q54A51_HUMAN Cervical EMMPRIN
3b5h A 100.0 Q54A51_HUMAN Cervical EMMPRIN
7xy8 A 100.0 BASI_HUMAN Isoform 2 of Basigin
3b5h C 100.0 Q54A51_HUMAN Cervical EMMPRIN
4u0q B 100.0 BASI_HUMAN Basigin
4u0q D 100.0 BASI_HUMAN Basigin
3b5h D 100.0 Q54A51_HUMAN Cervical EMMPRIN
8xej A 98.5 BASI_HUMAN Isoform 2 of Basigin
7dce A 98.5 BASI_HUMAN Isoform 2 of Basigin
3qr2 A 99.1 BASI_HUMAN Basigin
3qr2 B 99.1 BASI_HUMAN Basigin
3qqn A 98.3 BASI_HUMAN Basigin
3qqn B 98.3 BASI_HUMAN Basigin
5xf0 A 100.0 BASI_HUMAN Basigin
7xy8 B 100.0 BASI_HUMAN Isoform 2 of Basigin
7daa A 98.8 BASI_HUMAN Isoform 2 of Basigin
3i84 A 98.7 Q54A51_HUMAN Cervical EMMPRIN
3i84 B 98.7 Q54A51_HUMAN Cervical EMMPRIN
3i85 B 98.7 Q54A51_HUMAN Cervical EMMPRIN
3i85 A 98.7 Q54A51_HUMAN Cervical EMMPRIN
5x0t F 100.0 BASI_HUMAN Basigin
5x0t E 100.0 BASI_HUMAN Basigin
7y1b A 50.0 BASI_MOUSE Isoform 2 of Basigin
7y1q B 90.6 BASI_MOUSE Isoform 2 of Basigin 
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue.
HETERO
385 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
4u0q A B2L3N7_PLAFA Reticulocyte binding protein 5[286 aa] B 100.0
/100.0		 24
/25		 BASI_HUMAN Basigin
4u0q C B2L3N7_PLAFA Reticulocyte binding protein 5[285 aa] D 100.0
/100.0		 20
/21		 BASI_HUMAN Basigin
5x0t A 6H8 Fab fragment heavy chain[215 aa] E 100.0
/100.0		 9
/9		 BASI_HUMAN Basigin
5x0t B 6H8 Fab fragment heavy chain[215 aa] F 100.0
/100.0		 9
/9		 BASI_HUMAN Basigin
5x0t C 6H8 Fab fragment light chain[213 aa] E 100.0
/100.0		 7
/7		 BASI_HUMAN Basigin
5x0t D 6H8 Fab fragment light chain[213 aa] F 100.0
/100.0		 7
/7		 BASI_HUMAN Basigin
6lyy A MOT1_HUMAN Monocarboxylate transporter 1[382 aa] B 100.0
/100.0		 10
/10		 BASI_HUMAN Basigin
6lz0 A MOT1_HUMAN Monocarboxylate transporter 1[375 aa] B 100.0
/100.0		 13
/13		 BASI_HUMAN Basigin
7cko A MOT1_HUMAN Monocarboxylate transporter 1[375 aa] B 100.0
/100.0		 11
/11		 BASI_HUMAN Basigin
7ckr A MOT1_HUMAN Monocarboxylate transporter 1[382 aa] B 100.0
/100.0		 12
/12		 BASI_HUMAN Basigin
7da5 A MOT1_HUMAN Monocarboxylate transporter 1[375 aa] B 100.0
/100.0		 10
/10		 BASI_HUMAN Basigin
7xy8 C heavy chain[212 aa] A 100.0
/100.0		 15
/15		 BASI_HUMAN Isoform 2 of Basigin
7xy8 D heavy chain[218 aa] B 100.0
/100.0		 12
/12		 BASI_HUMAN Isoform 2 of Basigin
7xy8 E light chain[214 aa] A 100.0
/100.0		 8
/8		 BASI_HUMAN Isoform 2 of Basigin
7xy8 F light chain[214 aa] B 100.0
/100.0		 5
/5		 BASI_HUMAN Isoform 2 of Basigin
7daa B Light chain of antibody Fab fragment[217 aa] A 100.0
/98.8		 14
/14		 BASI_HUMAN Isoform 2 of Basigin
7dce D Light chain of Fab fragment[217 aa] A 100.0
/98.5		 12
/12		 BASI_HUMAN Isoform 2 of Basigin
8xej D Fab light chain[217 aa] A 100.0
/98.5		 12
/12		 BASI_HUMAN Isoform 2 of Basigin
7daa C Heavy chain of antibody Fab fragment[212 aa] A 100.0
/98.8		 7
/7		 BASI_HUMAN Isoform 2 of Basigin
7dce C Heavy chain of Fab fragment[209 aa] A 87.5
/98.5		 8
/8		 BASI_HUMAN Isoform 2 of Basigin
8xej C Fab heavy chain[209 aa] A 87.5
/98.5		 8
/8		 BASI_HUMAN Isoform 2 of Basigin
7dce B XKR8_HUMAN XK-related protein 8[355 aa] A 100.0
/98.5		 12
/12		 BASI_HUMAN Isoform 2 of Basigin
8xej B XKR8_HUMAN XK-related protein 8[358 aa] A 100.0
/98.5		 12
/12		 BASI_HUMAN Isoform 2 of Basigin
7y1b B Heavy chain of 6E7F1[214 aa] A 40.0
/50.0		 10
/11		 BASI_MOUSE Isoform 2 of Basigin
7y1b C Light chain of 6E7F1[213 aa] A 22.2
/50.0		 9
/10		 BASI_MOUSE Isoform 2 of Basigin
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
METAL
385 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
7daa D CD
CADMIUM ION[1 atoms] 		A 100.0
/98.8		 1
/1		 BASI_HUMAN Isoform 2 of Basigin
7daa E CD
CADMIUM ION[1 atoms] 		A 100.0
/98.8		 1
/1		 BASI_HUMAN Isoform 2 of Basigin
7daa F CD
CADMIUM ION[1 atoms] 		A 100.0
/98.8		 1
/1		 BASI_HUMAN Isoform 2 of Basigin
3i84 C CL
CHLORIDE ION[1 atoms] 		B 100.0
/98.7		 1
/1		 Q54A51_HUMAN Cervical EMMPRIN
3i84 C CL
CHLORIDE ION[1 atoms] 		B 100.0
/98.7		 1
/1		 Q54A51_HUMAN Cervical EMMPRIN
3i84 C CL
CHLORIDE ION[1 atoms] 		B 100.0
/98.7		 1
/1		 Q54A51_HUMAN Cervical EMMPRIN
3i84 C CL
CHLORIDE ION[1 atoms] 		B 100.0
/98.7		 1
/1		 Q54A51_HUMAN Cervical EMMPRIN
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
HOMO
385 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3qqn B BASI_HUMAN Basigin[116 aa] A 100.0
/98.3		 14
/15		 BASI_HUMAN Basigin
3qqn A BASI_HUMAN Basigin[117 aa] B 100.0
/98.3		 18
/18		 BASI_HUMAN Basigin
3qr2 A BASI_HUMAN Basigin[117 aa] A 100.0
/99.1		 1
/1		 BASI_HUMAN Basigin
3qr2 A BASI_HUMAN Basigin[117 aa] A 100.0
/99.1		 1
/1		 BASI_HUMAN Basigin
3qr2 B BASI_HUMAN Basigin[116 aa] A 100.0
/99.1		 14
/15		 BASI_HUMAN Basigin
3qr2 B BASI_HUMAN Basigin[116 aa] A 100.0
/99.1		 7
/7		 BASI_HUMAN Basigin
3qr2 B BASI_HUMAN Basigin[116 aa] A 100.0
/99.1		 7
/7		 BASI_HUMAN Basigin
3qr2 B BASI_HUMAN Basigin[116 aa] A 100.0
/99.1		 14
/15		 BASI_HUMAN Basigin
3qr2 A BASI_HUMAN Basigin[117 aa] B 100.0
/99.1		 16
/16		 BASI_HUMAN Basigin
3qr2 A BASI_HUMAN Basigin[117 aa] B 100.0
/99.1		 8
/8		 BASI_HUMAN Basigin
3qr2 A BASI_HUMAN Basigin[117 aa] B 100.0
/99.1		 8
/8		 BASI_HUMAN Basigin
3qr2 A BASI_HUMAN Basigin[117 aa] B 100.0
/99.1		 16
/16		 BASI_HUMAN Basigin
3qr2 B BASI_HUMAN Basigin[116 aa] B 100.0
/99.1		 7
/7		 BASI_HUMAN Basigin
3qr2 B BASI_HUMAN Basigin[116 aa] B 100.0
/99.1		 7
/7		 BASI_HUMAN Basigin
3i84 A Q54A51_HUMAN Cervical EMMPRIN[79 aa] A 100.0
/98.7		 7
/7		 Q54A51_HUMAN Cervical EMMPRIN
3i84 A Q54A51_HUMAN Cervical EMMPRIN[79 aa] A 100.0
/98.7		 7
/7		 Q54A51_HUMAN Cervical EMMPRIN
3i84 B Q54A51_HUMAN Cervical EMMPRIN[85 aa] A 100.0
/98.7		 36
/36		 Q54A51_HUMAN Cervical EMMPRIN
3i84 B Q54A51_HUMAN Cervical EMMPRIN[85 aa] A 100.0
/98.7		 5
/5		 Q54A51_HUMAN Cervical EMMPRIN
3i84 B Q54A51_HUMAN Cervical EMMPRIN[85 aa] A 100.0
/98.7		 5
/5		 Q54A51_HUMAN Cervical EMMPRIN
3i84 B Q54A51_HUMAN Cervical EMMPRIN[85 aa] A 100.0
/98.7		 36
/36		 Q54A51_HUMAN Cervical EMMPRIN
3i84 A Q54A51_HUMAN Cervical EMMPRIN[79 aa] B 100.0
/98.7		 30
/32		 Q54A51_HUMAN Cervical EMMPRIN
3i84 A Q54A51_HUMAN Cervical EMMPRIN[79 aa] B 100.0
/98.7		 30
/32		 Q54A51_HUMAN Cervical EMMPRIN
3i84 B Q54A51_HUMAN Cervical EMMPRIN[85 aa] B 100.0
/98.7		 9
/11		 Q54A51_HUMAN Cervical EMMPRIN
3i84 B Q54A51_HUMAN Cervical EMMPRIN[85 aa] B 100.0
/98.7		 9
/11		 Q54A51_HUMAN Cervical EMMPRIN
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.
PRECIPITANT
385 pdb_id contact mol homologue
a3 description a4 identity[%]5 Ncon6 description
3b5h E ACT
ACETATE ION[4 atoms] 		D 100.0
/100.0		 2
/2		 Q54A51_HUMAN Cervical EMMPRIN
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue.