Contact Molecules for Homologous Proteins | ||||
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PID | QueryLength | Homolgous Sequence in PDB | UniProt Query | TITLE |
2711687 | 385 | 31 | P35613(BASI_HUMAN) | RecName: Full=Basigin ;AltName: Full=5F7;AltName: Full=Collagenase stimulatory factor;AltName: Full=Extracellular matrix metalloproteinase inducer; Short=EMMPRIN;AltName: Full=Hepatoma-associated antigen ; Short=HAb18G ;AltName: Full=Leukocyte activation antigen M6;AltName: Full=OK blood group antigen;AltName: Full=Tumor cell-derived collagenase stimulatory factor; Short=TCSF;AltName: CD_antigen=CD147;Flags: Precursor; |
QUERYSEQ |
MAAALFVLLGFALLGTHGASGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDTCSQLWDGARLDRVHIHATYHQHAASTISIDTLVEEDTGTYECRASNDPDRNHLTRAPRVKWVRAQAVVLVLEPGTVFTTVEDLG SKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYR CNGTSSKGSDQAIITLRVRSHLAALWPFLGIVAEVLVLVTIIFIYEKRRKPEDVLDDDDAGSAPLKSSGQHQNDKGKNVRQRNSS |
385 | region | name | description |
1-21 | SIGNAL | ||
22-385 | CHAIN | /note="Basigin" /id="PRO_0000014518" | |
138-323 | TOPO_DOM | /note="Extracellular" | |
324-344 | TRANSMEM | /note="Helical" | |
345-385 | TOPO_DOM | /note="Cytoplasmic" | |
37-120 | DOMAIN | /note="Ig-like" | |
138-219 | DOMAIN | /note="Ig-like C2-type" | |
221-315 | DOMAIN | /note="Ig-like V-type" | |
353-385 | REGION | /note="Disordered" | |
356132195-199 | REGION | /note="Essential for interaction with KDR/VEGFR2" | |
1-385 | DISORDER | predicted by DISOPRED |
MONOMER | |||||||
385 | |||||||
pdb_id | a1 | identity[%]2 | description | ||||
7da5 | B | 100.0 | BASI_HUMAN Basigin | ||||
7cko | B | 100.0 | BASI_HUMAN Basigin | ||||
6lz0 | B | 100.0 | BASI_HUMAN Basigin | ||||
6lyy | B | 100.0 | BASI_HUMAN Basigin | ||||
7ckr | B | 100.0 | BASI_HUMAN Basigin | ||||
3b5h | B | 100.0 | Q54A51_HUMAN Cervical EMMPRIN | ||||
3b5h | A | 100.0 | Q54A51_HUMAN Cervical EMMPRIN | ||||
7xy8 | A | 100.0 | BASI_HUMAN Isoform 2 of Basigin | ||||
3b5h | C | 100.0 | Q54A51_HUMAN Cervical EMMPRIN | ||||
4u0q | D | 100.0 | BASI_HUMAN Basigin | ||||
4u0q | B | 100.0 | BASI_HUMAN Basigin | ||||
3b5h | D | 100.0 | Q54A51_HUMAN Cervical EMMPRIN | ||||
8xej | A | 98.5 | BASI_HUMAN Isoform 2 of Basigin | ||||
7dce | A | 98.5 | BASI_HUMAN Isoform 2 of Basigin | ||||
3qr2 | A | 99.1 | BASI_HUMAN Basigin | ||||
3qr2 | B | 99.1 | BASI_HUMAN Basigin | ||||
3qqn | A | 98.3 | BASI_HUMAN Basigin | ||||
3qqn | B | 98.3 | BASI_HUMAN Basigin | ||||
5xf0 | A | 100.0 | BASI_HUMAN Basigin | ||||
7xy8 | B | 100.0 | BASI_HUMAN Isoform 2 of Basigin | ||||
7daa | A | 98.8 | BASI_HUMAN Isoform 2 of Basigin | ||||
3i84 | A | 98.7 | Q54A51_HUMAN Cervical EMMPRIN | ||||
3i84 | B | 98.7 | Q54A51_HUMAN Cervical EMMPRIN | ||||
3i85 | B | 98.7 | Q54A51_HUMAN Cervical EMMPRIN | ||||
3i85 | A | 98.7 | Q54A51_HUMAN Cervical EMMPRIN | ||||
5x0t | F | 100.0 | BASI_HUMAN Basigin | ||||
5x0t | E | 100.0 | BASI_HUMAN Basigin | ||||
7y1b | A | 50.0 | BASI_MOUSE Isoform 2 of Basigin | ||||
6a69 | B | 47.2 | NPTN_HUMAN Neuroplastin | ||||
7y1q | B | 90.6 | BASI_MOUSE Isoform 2 of Basigin | ||||
6zr7 | A | 40.5 | DSCAM_HUMAN Down syndrome cell adhesion molecule | ||||
1.a1:asym_id for the homologue. 2.identity[%]2:sequence identity between the query and the homologue. |
HETERO | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
4u0q | A | B2L3N7_PLAFA Reticulocyte binding protein 5[286 aa] | B | 100.0 /100.0 |
24 /25 |
BASI_HUMAN Basigin | |
4u0q | C | B2L3N7_PLAFA Reticulocyte binding protein 5[285 aa] | D | 100.0 /100.0 |
20 /21 |
BASI_HUMAN Basigin | |
5x0t | A | 6H8 Fab fragment heavy chain[215 aa] | E | 100.0 /100.0 |
9 /9 |
BASI_HUMAN Basigin | |
5x0t | B | 6H8 Fab fragment heavy chain[215 aa] | F | 100.0 /100.0 |
9 /9 |
BASI_HUMAN Basigin | |
5x0t | C | 6H8 Fab fragment light chain[213 aa] | E | 100.0 /100.0 |
7 /7 |
BASI_HUMAN Basigin | |
5x0t | D | 6H8 Fab fragment light chain[213 aa] | F | 100.0 /100.0 |
7 /7 |
BASI_HUMAN Basigin | |
6lyy | A | MOT1_HUMAN Monocarboxylate transporter 1[382 aa] | B | 100.0 /100.0 |
10 /10 |
BASI_HUMAN Basigin | |
6lz0 | A | MOT1_HUMAN Monocarboxylate transporter 1[375 aa] | B | 100.0 /100.0 |
13 /13 |
BASI_HUMAN Basigin | |
7cko | A | MOT1_HUMAN Monocarboxylate transporter 1[375 aa] | B | 100.0 /100.0 |
11 /11 |
BASI_HUMAN Basigin | |
7ckr | A | MOT1_HUMAN Monocarboxylate transporter 1[382 aa] | B | 100.0 /100.0 |
12 /12 |
BASI_HUMAN Basigin | |
7da5 | A | MOT1_HUMAN Monocarboxylate transporter 1[375 aa] | B | 100.0 /100.0 |
10 /10 |
BASI_HUMAN Basigin | |
7xy8 | C | heavy chain[212 aa] | A | 100.0 /100.0 |
15 /15 |
BASI_HUMAN Isoform 2 of Basigin | |
7xy8 | D | heavy chain[218 aa] | B | 100.0 /100.0 |
12 /12 |
BASI_HUMAN Isoform 2 of Basigin | |
7xy8 | E | light chain[214 aa] | A | 100.0 /100.0 |
8 /8 |
BASI_HUMAN Isoform 2 of Basigin | |
7xy8 | F | light chain[214 aa] | B | 100.0 /100.0 |
5 /5 |
BASI_HUMAN Isoform 2 of Basigin | |
7daa | B | Light chain of antibody Fab fragment[217 aa] | A | 100.0 /98.8 |
14 /14 |
BASI_HUMAN Isoform 2 of Basigin | |
7dce | D | Light chain of Fab fragment[217 aa] | A | 100.0 /98.5 |
12 /12 |
BASI_HUMAN Isoform 2 of Basigin | |
8xej | D | Fab light chain[217 aa] | A | 100.0 /98.5 |
12 /12 |
BASI_HUMAN Isoform 2 of Basigin | |
7daa | C | Heavy chain of antibody Fab fragment[212 aa] | A | 100.0 /98.8 |
7 /7 |
BASI_HUMAN Isoform 2 of Basigin | |
7dce | C | Heavy chain of Fab fragment[209 aa] | A | 87.5 /98.5 |
8 /8 |
BASI_HUMAN Isoform 2 of Basigin | |
8xej | C | Fab heavy chain[209 aa] | A | 87.5 /98.5 |
8 /8 |
BASI_HUMAN Isoform 2 of Basigin | |
7dce | B | XKR8_HUMAN XK-related protein 8[355 aa] | A | 100.0 /98.5 |
12 /12 |
BASI_HUMAN Isoform 2 of Basigin | |
8xej | B | XKR8_HUMAN XK-related protein 8[358 aa] | A | 100.0 /98.5 |
12 /12 |
BASI_HUMAN Isoform 2 of Basigin | |
7y1b | B | Heavy chain of 6E7F1[214 aa] | A | 40.0 /50.0 |
10 /11 |
BASI_MOUSE Isoform 2 of Basigin | |
7y1b | C | Light chain of 6E7F1[213 aa] | A | 22.2 /50.0 |
9 /10 |
BASI_MOUSE Isoform 2 of Basigin | |
6a69 | A | AT2B1_HUMAN Plasma membrane calcium-transporting ATPase 1[911 .. | B | 75.0 /47.2 |
16 /16 |
NPTN_HUMAN Neuroplastin | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
COMPOUND | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6a69 | C |
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. |
B | 75.0 /47.2 |
4 /4 |
NPTN_HUMAN Neuroplastin | |
6zr7 | G |
NAG
2-acetamido-2-deoxy-beta-D-glucopyranose[14 atoms].. |
A | 50.0 /40.5 |
2 /2 |
DSCAM_HUMAN Down syndrome cell adhesion molecule | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
METAL | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
7daa | D |
CD
CADMIUM ION[1 atoms] |
A | 100.0 /98.8 |
1 /1 |
BASI_HUMAN Isoform 2 of Basigin | |
7daa | E |
CD
CADMIUM ION[1 atoms] |
A | 100.0 /98.8 |
1 /1 |
BASI_HUMAN Isoform 2 of Basigin | |
7daa | F |
CD
CADMIUM ION[1 atoms] |
A | 100.0 /98.8 |
1 /1 |
BASI_HUMAN Isoform 2 of Basigin | |
3i84 | C |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /98.7 |
1 /1 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | C |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /98.7 |
1 /1 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | C |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /98.7 |
1 /1 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | C |
CL
CHLORIDE ION[1 atoms] |
B | 100.0 /98.7 |
1 /1 |
Q54A51_HUMAN Cervical EMMPRIN | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
OTHERPOLY | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
6zr7 | B | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galact.. | A | 0.0 /40.5 |
1 /8 |
DSCAM_HUMAN Down syndrome cell adhesion molecule | |
6zr7 | C | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-b.. | A | 0.0 /40.5 |
6 /6 |
DSCAM_HUMAN Down syndrome cell adhesion molecule | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
HOMO | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
3qqn | B | BASI_HUMAN Basigin[116 aa] | A | 100.0 /98.3 |
14 /15 |
BASI_HUMAN Basigin | |
3qqn | A | BASI_HUMAN Basigin[117 aa] | B | 100.0 /98.3 |
18 /18 |
BASI_HUMAN Basigin | |
3qr2 | A | BASI_HUMAN Basigin[117 aa] | A | 100.0 /99.1 |
1 /1 |
BASI_HUMAN Basigin | |
3qr2 | A | BASI_HUMAN Basigin[117 aa] | A | 100.0 /99.1 |
1 /1 |
BASI_HUMAN Basigin | |
3qr2 | B | BASI_HUMAN Basigin[116 aa] | A | 100.0 /99.1 |
14 /15 |
BASI_HUMAN Basigin | |
3qr2 | B | BASI_HUMAN Basigin[116 aa] | A | 100.0 /99.1 |
7 /7 |
BASI_HUMAN Basigin | |
3qr2 | B | BASI_HUMAN Basigin[116 aa] | A | 100.0 /99.1 |
7 /7 |
BASI_HUMAN Basigin | |
3qr2 | B | BASI_HUMAN Basigin[116 aa] | A | 100.0 /99.1 |
14 /15 |
BASI_HUMAN Basigin | |
3qr2 | A | BASI_HUMAN Basigin[117 aa] | B | 100.0 /99.1 |
16 /16 |
BASI_HUMAN Basigin | |
3qr2 | A | BASI_HUMAN Basigin[117 aa] | B | 100.0 /99.1 |
8 /8 |
BASI_HUMAN Basigin | |
3qr2 | A | BASI_HUMAN Basigin[117 aa] | B | 100.0 /99.1 |
8 /8 |
BASI_HUMAN Basigin | |
3qr2 | A | BASI_HUMAN Basigin[117 aa] | B | 100.0 /99.1 |
16 /16 |
BASI_HUMAN Basigin | |
3qr2 | B | BASI_HUMAN Basigin[116 aa] | B | 100.0 /99.1 |
7 /7 |
BASI_HUMAN Basigin | |
3qr2 | B | BASI_HUMAN Basigin[116 aa] | B | 100.0 /99.1 |
7 /7 |
BASI_HUMAN Basigin | |
3i84 | A | Q54A51_HUMAN Cervical EMMPRIN[79 aa] | A | 100.0 /98.7 |
7 /7 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | A | Q54A51_HUMAN Cervical EMMPRIN[79 aa] | A | 100.0 /98.7 |
7 /7 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | B | Q54A51_HUMAN Cervical EMMPRIN[85 aa] | A | 100.0 /98.7 |
36 /36 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | B | Q54A51_HUMAN Cervical EMMPRIN[85 aa] | A | 100.0 /98.7 |
5 /5 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | B | Q54A51_HUMAN Cervical EMMPRIN[85 aa] | A | 100.0 /98.7 |
5 /5 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | B | Q54A51_HUMAN Cervical EMMPRIN[85 aa] | A | 100.0 /98.7 |
36 /36 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | A | Q54A51_HUMAN Cervical EMMPRIN[79 aa] | B | 100.0 /98.7 |
30 /32 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | A | Q54A51_HUMAN Cervical EMMPRIN[79 aa] | B | 100.0 /98.7 |
30 /32 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | B | Q54A51_HUMAN Cervical EMMPRIN[85 aa] | B | 100.0 /98.7 |
9 /11 |
Q54A51_HUMAN Cervical EMMPRIN | |
3i84 | B | Q54A51_HUMAN Cervical EMMPRIN[85 aa] | B | 100.0 /98.7 |
9 /11 |
Q54A51_HUMAN Cervical EMMPRIN | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. | |||||||
PRECIPITANT | |||||||
385 | pdb_id | contact mol | homologue | ||||
a3 | description | a4 | identity[%]5 | Ncon6 | description | ||
3b5h | E |
ACT
ACETATE ION[4 atoms] |
D | 100.0 /100.0 |
2 /2 |
Q54A51_HUMAN Cervical EMMPRIN | |
3.a3:asym_id for the contact molecule. 4.a4:asym_id for the template homologue. 5.identity[%]5:sequence identity between the query and the template homologue only for the contact residues. Number after the slash / is sequence identity for all the aligned region. 6.Ncon6:number of aligned contact residues for the query. Number after the slash / is number of contact residues in the template homologue. |