Modeling a 3D structure on 8c77_D_1_Y_1_Z_1_AA_1_BA_1_CA_1_DA_1 by the Modeller program (TEMPLATE: 8c77) assembly_id:4)

Modeller scripts for complex

1. Download modeller python script: model_complex.py

2. Download alignment file: alignment_complex.ali

3. Download template PDB file: 8c77.pdb

4. execute command:

   mod10 model_complex.py

Modeller scripts for each subunit

Subunit 1

1. Download modeller script: model1.py

2. Download alignment: alignment1.ali

3. Download template PDB file: 8c77_D_1.pdb

4. execute command:

   mod10 model1.py

   Subunit 2

5. Download template PDB file: 8c77_Y_1.pdb

   Subunit 3

6. Download template PDB file: 8c77_Z_1.pdb

   Subunit 4

7. Download template PDB file: 8c77_AA_1.pdb

   Subunit 5

8. Download template PDB file: 8c77_BA_1.pdb

   Subunit 6

9. Download template PDB file: 8c77_CA_1.pdb

   Subunit 7

10. Download template PDB file: 8c77_DA_1.pdb

    Merge all the subunit models

11. execute command:

    cat query1.B99990001.pdb 8c77_Y_1.pdb 8c77_Z_1.pdb 8c77_AA_1.pdb 8c77_BA_1.pdb 8c77_CA_1.pdb 8c77_DA_1.pdb > model.pdb