Modeling a 3D structure on 1tu4_A_1_A_2_B_1_B_2_C_1_C_2_D_1_D_2_E_1_E_2_F_1_F_2_G_1_G_2_H_1_H_2_I_1_I_2_J_1_J_2_K_1_K_2_L_1_L_2_M_1_M_2_N_1_N_2_O_1_O_2_P_1_P_2_Q_1_Q_2_R_1_R_2_S_1_S_2_T_1_T_2 by the Modeller program (TEMPLATE: 1tu4) assembly_id:5)

Modeller scripts for complex

1. Download modeller python script: model_complex.py

2. Download alignment file: alignment_complex.ali

3. Download template PDB file: 1tu4.pdb

4. execute command:

   mod10 model_complex.py

Modeller scripts for each subunit

Subunit 1

1. Download modeller script: model1.py

2. Download alignment: alignment1.ali

3. Download template PDB file: 1tu4_A_1.pdb

4. execute command:

   mod10 model1.py

   Subunit 2

5. Download template PDB file: 1tu4_A_2.pdb

   Subunit 3

6. Download template PDB file: 1tu4_B_1.pdb

   Subunit 4

7. Download template PDB file: 1tu4_B_2.pdb

   Subunit 5

8. Download template PDB file: 1tu4_C_1.pdb

   Subunit 6

9. Download template PDB file: 1tu4_C_2.pdb

   Subunit 7

10. Download template PDB file: 1tu4_D_1.pdb

    Subunit 8

11. Download template PDB file: 1tu4_D_2.pdb

    Subunit 9

12. Download template PDB file: 1tu4_E_1.pdb

    Subunit 10

13. Download template PDB file: 1tu4_E_2.pdb

    Subunit 11

14. Download template PDB file: 1tu4_F_1.pdb

    Subunit 12

15. Download template PDB file: 1tu4_F_2.pdb

    Subunit 13

16. Download template PDB file: 1tu4_G_1.pdb

    Subunit 14

17. Download template PDB file: 1tu4_G_2.pdb

    Subunit 15

18. Download template PDB file: 1tu4_H_1.pdb

    Subunit 16

19. Download template PDB file: 1tu4_H_2.pdb

    Subunit 17

20. Download template PDB file: 1tu4_I_1.pdb

    Subunit 18

21. Download template PDB file: 1tu4_I_2.pdb

    Subunit 19

22. Download template PDB file: 1tu4_J_1.pdb

    Subunit 20

23. Download template PDB file: 1tu4_J_2.pdb

    Subunit 21

24. Download template PDB file: 1tu4_K_1.pdb

    Subunit 22

25. Download template PDB file: 1tu4_K_2.pdb

    Subunit 23

26. Download template PDB file: 1tu4_L_1.pdb

    Subunit 24

27. Download template PDB file: 1tu4_L_2.pdb

    Subunit 25

28. Download template PDB file: 1tu4_M_1.pdb

    Subunit 26

29. Download template PDB file: 1tu4_M_2.pdb

    Subunit 27

30. Download template PDB file: 1tu4_N_1.pdb

    Subunit 28

31. Download template PDB file: 1tu4_N_2.pdb

    Subunit 29

32. Download template PDB file: 1tu4_O_1.pdb

    Subunit 30

33. Download template PDB file: 1tu4_O_2.pdb

    Subunit 31

34. Download template PDB file: 1tu4_P_1.pdb

    Subunit 32

35. Download template PDB file: 1tu4_P_2.pdb

    Subunit 33

36. Download template PDB file: 1tu4_Q_1.pdb

    Subunit 34

37. Download template PDB file: 1tu4_Q_2.pdb

    Subunit 35

38. Download template PDB file: 1tu4_R_1.pdb

    Subunit 36

39. Download template PDB file: 1tu4_R_2.pdb

    Subunit 37

40. Download template PDB file: 1tu4_S_1.pdb

    Subunit 38

41. Download template PDB file: 1tu4_S_2.pdb

    Subunit 39

42. Download template PDB file: 1tu4_T_1.pdb

    Subunit 40

43. Download template PDB file: 1tu4_T_2.pdb

    Merge all the subunit models

44. execute command:

    cat query1.B99990001.pdb 1tu4_A_2.pdb 1tu4_B_1.pdb 1tu4_B_2.pdb 1tu4_C_1.pdb 1tu4_C_2.pdb 1tu4_D_1.pdb 1tu4_D_2.pdb 1tu4_E_1.pdb 1tu4_E_2.pdb 1tu4_F_1.pdb 1tu4_F_2.pdb 1tu4_G_1.pdb 1tu4_G_2.pdb 1tu4_H_1.pdb 1tu4_H_2.pdb 1tu4_I_1.pdb 1tu4_I_2.pdb 1tu4_J_1.pdb 1tu4_J_2.pdb 1tu4_K_1.pdb 1tu4_K_2.pdb 1tu4_L_1.pdb 1tu4_L_2.pdb 1tu4_M_1.pdb 1tu4_M_2.pdb 1tu4_N_1.pdb 1tu4_N_2.pdb 1tu4_O_1.pdb 1tu4_O_2.pdb 1tu4_P_1.pdb 1tu4_P_2.pdb 1tu4_Q_1.pdb 1tu4_Q_2.pdb 1tu4_R_1.pdb 1tu4_R_2.pdb 1tu4_S_1.pdb 1tu4_S_2.pdb 1tu4_T_1.pdb 1tu4_T_2.pdb > model.pdb