[pdbjlvh2]Protein Model on 8pi3_A_1_B

Protein Model on 8pi3_A_1_B_1 (TEMPLATE: 8pi3 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(CATL1_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [219 aa]	Cathepsin S :CATS_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [11 aa]	NNPI-C10 inhibitor	134Q(S) 135C 136G 138C 139W 174G 179N 180G 181G 182L(F) 183M 184D(T) 248A(G) 252G(R) 274M(V) 275D(N) 276H 277G 327A(F) (identity: 57.9 %/57.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:8pi3_A_1 identity=57.5%

queryA       115:PRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQ-GNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :* ******** ** ** ** ** ****** **** *   *** * *** *******    ** ***** *  ****  ** * **  **** *    * *:
8pi3_A_1       4:PDSVDWREKGCVTEVKDQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQY: 103
SecStr          : S EEGGGGT      B  SSB HHHHHHHHHHHHHHHHHHS    B HHHHHHHS GGGT  TTB   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeebbbeeeebbbebbebeebebbbbbbbbbbbbbbbeeeeeeeeebbbbbbbbbbeeebebebbeeeebbebbebbeeeebbbbeeebebeeeeeeeee:    
Contact         :                   bbb bb                                   b    bbbbbb                             

queryA       214:NPKYSVANDTGFVDIP-KQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYV: 312
                :  **  *        *   *  *  ***  ** **  ** * **  *  * * ** *      *********          *********   *  ** :
8pi3_A_1     104:DSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSC-TQNVNHGVLVVGYG----DLNGKEYWLVKNSWGHNFGEEGYI: 198
SecStr          : GGGEEE   EEEE  TT HHHHHHHHHHT  EEEEE   SHHHHT  SSEE  TT - S   EEEEEEEEE----EETTEEEEEEE SB TTSTBTTEE:    
ExpBur          :eeeeebbebeeeeebeeeebebbbebbbeebbbbbbbbbeeeebeebeebebebeeb-eeeeebbbbbbbbb----eeeeeebbbbbbbebeebeeebbb:    
Contact         :                                   b   b                     bbbb                                   

queryA       313:KMAKDRRNHCGIASAASYPTV: 333
                : **    *******  ***  :
8pi3_A_1     199:RMARNKGNHCGIASFPSYPEI: 219
SecStr          :EEE SSSSGGGTTTS EEEE :    
ExpBur          :bbbbeeebbbbbbbebbbbbe:    
Contact         :              b

Protein Model on 8pi3_A_1_B_1 (TEMPLATE: 8pi3 )

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