Protein Model on 8ij9_A_1_C_1
(TEMPLATE: 
8ij9
)Protein Model on 8ij9_A_1_C_1
(TEMPLATE: 8ij9
)| CurrentView:JAVA Change to:[HTML5] |
DOWNLOAD: [sequence-replaced 3D model]
[for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(RAB7A_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [168 aa] | Ras-related protein Rab-6B :RAB6B_MOUSE | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [71 aa] | ELKS/Rab6-interacting/CAST family member 1 :RB6I2_RAT | 10K 41I 43A(I) 44D 45F 47T(S) 49E(T) 51M(Y) 58T(R) 60Q 62W 69R 70F 73L 76A(S) 77F(Y) 79R 80G(D) (identity: 55.6 %/38.2 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:8ij9_A_1 identity=38.2% |
queryA 9:LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLI: 108
: * ** ****** * * * **** *** * ** * * ***** *** ** * * * * * * * * * :
8ij9_A_1 11:FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGLERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRT: 110
SecStr :EEEEEE STTSSHHHHHHHHHHS SS SEEEEEEEEEETTEEEEEEEEEE SGGGGGGHHHHHHT SEEEEEEETT HHHHHTHHHHHHHHHH:
ExpBur :bbbbbbbbeebbbeebbbbbbeeeeeeeeeebebbeebeeebebeeebbebbbebbbbeeebeeebeeebeebebbbbbbbbbeeebbeebeebbeebee:
Contact : b b bbb b b b b b b bb b bb bb
queryA 109:QASPRDPENFPFVVLGNKIDL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
: *** ** ** ***** ** * * *:
8ij9_A_1 111:ERGS----DVIIMLVGNKTDLADKRQITIEEGEQRA-KELSVMFIETSAKTGYNVKQLFRRVA: 168
SecStr :HHTT----SSEEEEEEE TT GGG S HHHHHHHH-HHTT EEEE TTT TTHHHHHHHHH:
ExpBur :eeee----ebebbbbbbebeeeeeeebeeeebeebb-eeeebebbbbbbeeeeebeebbeebb:
|
[assembly_id:1]
[help]