Protein Model on 8c77_D_1_AA_1 (TEMPLATE: 8c77 )

CurrentView:JAVA Change to:[HTML5] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:4]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(CATL1_HUMAN) D 1 (D) polymer(polypeptide(L)) [220 aa] Cathepsin L :CATL1_HUMAN
2 b AA 1 (D) non-polymer(PG4) TETRAETHYLENE GLYCOL 131N 133G 204Y 205E 206A (identity: 100.0 %/99.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:8c77_D_1 identity=99.5%
queryA       114:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 213
                :****************************************************************************************************:
8c77_D_1       1:APRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKY: 100
SecStr          :  S EEGGGGT      B TTSS HHHHHHHHHHHHHHHHHHS    B HHHHHHH GGGT  GGG   HHHHHHHHHHHT EEBTTTS   SS      :    
ExpBur          :eeeebebeeeebbbeebebeebebbbbbbbbbbbbbbbbeeeeeeeebbbbbbbbbbeebebebbeeeebbebbebbeeeebbbbbeebebeeeeeeeeb:    
Contact         :                 b b                                                                      bbb       

queryA       214:NPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 313
                :********* ******************************************************************************************:
8c77_D_1     101:NPKYSVANDAGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVK: 200
SecStr          : GGGEEE  S EEE  SSHHHHHHHHHHH  EEEEE   SHHHHT  SSEE  TT  SS   EEEEEEEEEE S GGG  EEEEEE SB TTSTBTTEEE:    
ExpBur          :eeeeeebebebeeebeeebebbbebbbebbbbbbbbbbebeebeebeeeebebeebbeeeeebbbbbbbbbeeeeeeeeeebbbbbbbebeebeeebbbb:    

queryA       314:MAKDRRNHCGIASAASYPTV: 333
                :********************:
8c77_D_1     201:MAKDRRNHCGIASAASYPTV: 220
SecStr          :EE SSSSGGGTTTT EEE  :    
ExpBur          :bbbeeebbbbbbbebbbbee:    


Input Residue Numbers for Focused Sites

ex) 2,15,123