Protein Model on 8alk assembly_id=1 (TEMPLATE: 8alk assembly_id:1 )

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description b(query A)
1 a A 1 (A) polymer(polypeptide(L)) [447 aa] Phosphocholine hydrolase Lem3 :LEM3_LEGPH 14L(I) 68E 69R 70F 71Q(R) 72S(T) 73L(I) 74G(T) 75V(S) 76A(T) 77F(Y) 78Y 79R 102W 109Q(Y) 110A (identity: 43.8 %/37.1 %)
2 b A(RAB7A_HUMAN) B 1 (B) polymer(polypeptide(L)) [163 aa] Ras-related protein Rab-1B :RAB1B_HUMAN
3 c C 1 (A) non-polymer(CA) CALCIUM ION
4 d D 1 (A) non-polymer(CA) CALCIUM ION
5 e E 1 (A) non-polymer(CA) CALCIUM ION
6 f F 1 (B) non-polymer(GDP) GUANOSINE-5'-DIPHOSPHATE 16D 17S 18G 19V 20G 21K 22T(S) 23S(C) 33F(Y) 63D 125N 126K 128D 129L 155S 156A 157K (identity: 82.4 %/37.1 %)
7 g G 1 (B) non-polymer(CA) CALCIUM ION 22T(S) 44D 63D (identity: 66.7 %/37.1 %)
8 h H 1 (B) non-polymer(OJU) 2-[[[5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxyethyl-[3-(2-chloranylethanoylamino)propyl]-dimethyl-azanium 76A(T) (identity: 0.0 %/37.1 %)
ALIGNMENTS
MODEL[2] Protein A "queryA" TEMPLATE:8alk_B_1 identity=37.1%
queryA         8:LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFL: 107
                :* *    *******  *                   **       *      ***********       ****     * ***          *  *  :
8alk_B_1       9:LFKLLLIGDSGVGKSCLLLRFADDTYTXXXXXXXXVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSTYYRGAHGIIVVYDVTDQESYANVKQWLQEID: 108
SecStr          :EEEEEEESSTTSSHHHHHHHHHT    --------  EEEEEEEETTEEEEEEEEE TTGGGT     S S   SEEEEEEETT HHHHHTHHHHHHHHH:    
ExpBur          :ebbbebbbbeebbbbebbbbbeeeeee--------eeeeeeebeeeeeebebbbebeeeeeeeeeeeeeeeeeeebbbbbbbbeeeebbeebeeebeebe:    
Contact         :      a ffffffff         f          g                  f    aaaaaaaaaaaa                      a     
Contact         :              g                                        g            h                               

queryA       108:IQASPRDPENFPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIA: 170
                :  *     **      *** **    *              **  ***** * ****** * *:
8alk_B_1     109:RYAX----ENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA: 167
SecStr          :HH -----   EEEEEEE TT TTT  S HHHHHHHHHHTT  EEE BTTTTBTHHHHHHHHH:    
ExpBur          :eee-----eebeebbbbbebeeeeeeebeeeebeeebeeeebebebbbbeeeeebeebbeebb:    
Contact         : aa              ff ff                         fff                                                  


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